RNA–Protein interactions for RNA: YHR105W

YPT35, Transcript of Endosomal protein of unknown function, yeast

Gene YPT35, Length 645 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPT35	YHR105W	RPL34A	P87262	121 aa	Predicted RBP	5.97	□□□□□ -1.45
YPT35	YHR105W	TCB1	Q12466	1186 aa		5.97	□□□□□ -1.45
YPT35	YHR105W	PHO87	P25360	923 aa		5.96	□□□□□ -1.46
YPT35	YHR105W	CAF120	P53836	1060 aa		5.96	□□□□□ -1.46
YPT35	YHR105W	TY1A-BL	Q12266	440 aa		5.96	□□□□□ -1.46
YPT35	YHR105W	SPT2	P06843	333 aa	Predicted RBP	5.95	□□□□□ -1.46
YPT35	YHR105W	DAT1	P13483	248 aa	Known RBP	5.95	□□□□□ -1.46
YPT35	YHR105W	ACO2	P39533	789 aa		5.95	□□□□□ -1.46
YPT35	YHR105W	SEN54	Q02825	467 aa	Predicted RBP	5.95	□□□□□ -1.46
YPT35	YHR105W	YDL176W	Q12027	708 aa		5.95	□□□□□ -1.46
YPT35	YHR105W	TSC13	Q99190	310 aa		5.95	□□□□□ -1.46
YPT35	YHR105W	UTR2	P32623	467 aa		5.94	□□□□□ -1.46
YPT35	YHR105W	UBX7	P38349	436 aa		5.94	□□□□□ -1.46
YPT35	YHR105W	AIM9	P40053	627 aa	Known RBP	5.94	□□□□□ -1.46
YPT35	YHR105W	ROM1	P53046	1155 aa		5.94	□□□□□ -1.46
YPT35	YHR105W	TBS1	P38114	1094 aa		5.93	□□□□□ -1.46
YPT35	YHR105W	WTM2	Q12206	467 aa		5.93	□□□□□ -1.46
YPT35	YHR105W	HAP4	P14064	554 aa		5.92	□□□□□ -1.46
YPT35	YHR105W	NTH2	P35172	780 aa		5.92	□□□□□ -1.46
YPT35	YHR105W	SWI5	P08153	709 aa		5.91	□□□□□ -1.46
YPT35	YHR105W	TPS3	P38426	1054 aa	Known RBP	5.91	□□□□□ -1.46
YPT35	YHR105W	OSH7	P38755	437 aa		5.91	□□□□□ -1.46
YPT35	YHR105W	HAT1	Q12341	374 aa		5.91	□□□□□ -1.46
YPT35	YHR105W	YIR007W	P40566	764 aa		5.9	□□□□□ -1.46
YPT35	YHR105W	YFL034W	P43564	1073 aa		5.9	□□□□□ -1.46
YPT35	YHR105W	RPS6A	P0CX37	236 aa	Known RBP	5.89	□□□□□ -1.47
YPT35	YHR105W	RPS6B	P0CX38	236 aa	Predicted RBP	5.89	□□□□□ -1.47
YPT35	YHR105W	UTP7	P40055	554 aa	Known RBP	5.89	□□□□□ -1.47
YPT35	YHR105W	GAS4	Q08271	471 aa		5.89	□□□□□ -1.47
YPT35	YHR105W	VTC4	P47075	721 aa		5.88	□□□□□ -1.47
YPT35	YHR105W	DAL1	P32375	460 aa		5.87	□□□□□ -1.47
YPT35	YHR105W	ROG3	P43602	733 aa		5.86	□□□□□ -1.47
YPT35	YHR105W	CDC19	P00549	500 aa	Known RBP	5.85	□□□□□ -1.47
YPT35	YHR105W	CYT1	P07143	309 aa		5.85	□□□□□ -1.47
YPT35	YHR105W	SUV3	P32580	737 aa		5.85	□□□□□ -1.47
YPT35	YHR105W	SSN3	P39073	555 aa		5.85	□□□□□ -1.47
YPT35	YHR105W	ALA1	P40825	983 aa	Known RBP	5.85	□□□□□ -1.47
YPT35	YHR105W	MSN5	P52918	1224 aa		5.85	□□□□□ -1.47
YPT35	YHR105W	CWC15	Q03772	175 aa	Known RBP	5.85	□□□□□ -1.47
YPT35	YHR105W	TY1A-MR1	Q04215	440 aa		5.85	□□□□□ -1.47
YPT35	YHR105W	VAN1	P23642	535 aa		5.84	□□□□□ -1.47
YPT35	YHR105W	SLD2	P34252	453 aa		5.84	□□□□□ -1.47
YPT35	YHR105W	ERP5	P38819	212 aa		5.84	□□□□□ -1.47
YPT35	YHR105W	SUM1	P46676	1062 aa		5.84	□□□□□ -1.47
YPT35	YHR105W	YPQ2	Q06328	317 aa		5.84	□□□□□ -1.47
YPT35	YHR105W	YBL113C	Q7M4S9	792 aa		5.84	□□□□□ -1.47
YPT35	YHR105W	UBP1	P25037	809 aa		5.83	□□□□□ -1.48
YPT35	YHR105W	AHP1	P38013	176 aa	Known RBP	5.83	□□□□□ -1.48
YPT35	YHR105W	IPL1	P38991	367 aa		5.82	□□□□□ -1.48
YPT35	YHR105W	YGR035C	P53222	116 aa		5.82	□□□□□ -1.48
YPT35	YHR105W	NAM8	Q00539	523 aa	Known RBP	5.82	□□□□□ -1.48
YPT35	YHR105W	PUF6	Q04373	656 aa	Known RBP	5.82	□□□□□ -1.48
YPT35	YHR105W	PUN1	Q06991	263 aa		5.82	□□□□□ -1.48
YPT35	YHR105W	TRL1	P09880	827 aa	Known RBP	5.81	□□□□□ -1.48
YPT35	YHR105W	NGR1	P32831	672 aa	Known RBP	5.81	□□□□□ -1.48
YPT35	YHR105W	HPF1	Q05164	967 aa		5.81	□□□□□ -1.48
YPT35	YHR105W	TRS33	Q99394	268 aa		5.81	□□□□□ -1.48
YPT35	YHR105W	SLA1	P32790	1244 aa		5.8	□□□□□ -1.48
YPT35	YHR105W	BOL3	P39724	118 aa		5.8	□□□□□ -1.48
YPT35	YHR105W	UBP15	P50101	1230 aa		5.8	□□□□□ -1.48
YPT35	YHR105W	ORC1	P54784	914 aa	Predicted RBP	5.8	□□□□□ -1.48
YPT35	YHR105W	CCP1	P00431	361 aa		5.79	□□□□□ -1.48
YPT35	YHR105W	HEM3	P28789	327 aa		5.79	□□□□□ -1.48
YPT35	YHR105W	ALD4	P46367	519 aa	Known RBP	5.79	□□□□□ -1.48
YPT35	YHR105W	YNL165W	P53891	406 aa		5.79	□□□□□ -1.48
YPT35	YHR105W	KAR5	Q04746	504 aa		5.79	□□□□□ -1.48
YPT35	YHR105W	PNP1	Q05788	311 aa		5.79	□□□□□ -1.48
YPT35	YHR105W	RGA2	Q06407	1009 aa		5.79	□□□□□ -1.48
YPT35	YHR105W	TY1A-DR3	Q12441	440 aa		5.79	□□□□□ -1.48
YPT35	YHR105W	MCM1	P11746	286 aa		5.78	□□□□□ -1.48
YPT35	YHR105W	SRS2	P12954	1174 aa		5.78	□□□□□ -1.48
YPT35	YHR105W	RRN6	P32786	894 aa		5.78	□□□□□ -1.48
YPT35	YHR105W	SHM1	P37292	490 aa	Predicted RBP	5.78	□□□□□ -1.48
YPT35	YHR105W	PAM1	P37304	830 aa	Known RBP	5.78	□□□□□ -1.48
YPT35	YHR105W	MDJ2	P42834	146 aa		5.78	□□□□□ -1.48
YPT35	YHR105W	JJJ2	P46997	583 aa		5.78	□□□□□ -1.48
YPT35	YHR105W	TRK2	P28584	889 aa		5.77	□□□□□ -1.49
YPT35	YHR105W	IRE1	P32361	1115 aa		5.77	□□□□□ -1.49
YPT35	YHR105W	YBR197C	P38306	217 aa		5.77	□□□□□ -1.49
YPT35	YHR105W	HXT5	P38695	592 aa		5.77	□□□□□ -1.49
YPT35	YHR105W	STM1	P39015	273 aa	Known RBP	5.77	□□□□□ -1.49
YPT35	YHR105W	CAB1	Q04430	367 aa		5.77	□□□□□ -1.49
YPT35	YHR105W	RRP15	Q06511	250 aa	Predicted RBP	5.77	□□□□□ -1.49
YPT35	YHR105W	RPS31	P05759	152 aa	Known RBP	5.76	□□□□□ -1.49
YPT35	YHR105W	GRS1	P38088	690 aa	Known RBP	5.76	□□□□□ -1.49
YPT35	YHR105W	LYS5	P50113	272 aa		5.76	□□□□□ -1.49
YPT35	YHR105W	CWH41	P53008	833 aa		5.76	□□□□□ -1.49
YPT35	YHR105W	CUZ1	P53899	274 aa		5.76	□□□□□ -1.49
YPT35	YHR105W	YHL050C	P38721	697 aa		5.75	□□□□□ -1.49
YPT35	YHR105W	YHR219W	P38900	624 aa		5.75	□□□□□ -1.49
YPT35	YHR105W	FOX2	Q02207	900 aa	Known RBP	5.75	□□□□□ -1.49
YPT35	YHR105W	YMR265C	Q03508	461 aa	Known RBP	5.75	□□□□□ -1.49
YPT35	YHR105W	MSC6	Q08818	692 aa	Known RBP	5.75	□□□□□ -1.49
YPT35	YHR105W	WHI5	Q12416	295 aa		5.75	□□□□□ -1.49
YPT35	YHR105W	DPH6	Q12429	685 aa		5.75	□□□□□ -1.49
YPT35	YHR105W	Q0182	Q9ZZW1	134 aa		5.75	□□□□□ -1.49
YPT35	YHR105W	BOI1	P38041	980 aa	Known RBP	5.74	□□□□□ -1.49
YPT35	YHR105W	CEM1	P39525	442 aa		5.74	□□□□□ -1.49
YPT35	YHR105W	SNU71	P53207	620 aa	Known RBP	5.74	□□□□□ -1.49
YPT35	YHR105W	DIT1	P21623	536 aa		5.73	□□□□□ -1.49

Retrieved 100 of 5,963 RNA–protein pairs in 31.3 ms