RNA–Protein interactions for RNA: YHR039C-A

VMA10, Transcript of Subunit G of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA10, Length 345 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA10	YHR039C-A	UBX7	P38349	436 aa		5.24	□□□□□ -1.57
VMA10	YHR039C-A	SUM1	P46676	1062 aa		5.24	□□□□□ -1.57
VMA10	YHR039C-A	YDR444W	Q04093	687 aa		5.24	□□□□□ -1.57
VMA10	YHR039C-A	GAS4	Q08271	471 aa		5.24	□□□□□ -1.57
VMA10	YHR039C-A	YLR346C	Q06139	101 aa		5.23	□□□□□ -1.57
VMA10	YHR039C-A	TCB1	Q12466	1186 aa		5.23	□□□□□ -1.57
VMA10	YHR039C-A	SSN3	P39073	555 aa		5.22	□□□□□ -1.57
VMA10	YHR039C-A	UBP2	Q01476	1272 aa		5.22	□□□□□ -1.57
VMA10	YHR039C-A	LCB5	Q06147	687 aa	Known RBP	5.22	□□□□□ -1.57
VMA10	YHR039C-A	CYT1	P07143	309 aa		5.21	□□□□□ -1.58
VMA10	YHR039C-A	DAL1	P32375	460 aa		5.21	□□□□□ -1.58
VMA10	YHR039C-A	GLY1	P37303	387 aa	Known RBP	5.21	□□□□□ -1.58
VMA10	YHR039C-A	YPQ2	Q06328	317 aa		5.21	□□□□□ -1.58
VMA10	YHR039C-A	ALA1	P40825	983 aa	Known RBP	5.2	□□□□□ -1.58
VMA10	YHR039C-A	VTC4	P47075	721 aa		5.2	□□□□□ -1.58
VMA10	YHR039C-A	MSN5	P52918	1224 aa		5.2	□□□□□ -1.58
VMA10	YHR039C-A	SSA1	P10591	642 aa	Known RBP	5.19	□□□□□ -1.58
VMA10	YHR039C-A	VAN1	P23642	535 aa		5.19	□□□□□ -1.58
VMA10	YHR039C-A	UBP1	P25037	809 aa		5.19	□□□□□ -1.58
VMA10	YHR039C-A	GAR1	P28007	205 aa	Known RBP	5.19	□□□□□ -1.58
VMA10	YHR039C-A	TY1A-BL	Q12266	440 aa		5.19	□□□□□ -1.58
VMA10	YHR039C-A	SLA1	P32790	1244 aa		5.18	□□□□□ -1.58
VMA10	YHR039C-A	NGR1	P32831	672 aa	Known RBP	5.18	□□□□□ -1.58
VMA10	YHR039C-A	SCW11	P53189	542 aa		5.18	□□□□□ -1.58
VMA10	YHR039C-A	MCM1	P11746	286 aa		5.17	□□□□□ -1.58
VMA10	YHR039C-A	OSH7	P38755	437 aa		5.17	□□□□□ -1.58
VMA10	YHR039C-A	PUF6	Q04373	656 aa	Known RBP	5.17	□□□□□ -1.58
VMA10	YHR039C-A	TY1A-DR3	Q12441	440 aa		5.17	□□□□□ -1.58
VMA10	YHR039C-A	TRS33	Q99394	268 aa		5.17	□□□□□ -1.58
VMA10	YHR039C-A	SUV3	P32580	737 aa		5.16	□□□□□ -1.58
VMA10	YHR039C-A	GEF1	P37020	779 aa		5.16	□□□□□ -1.58
VMA10	YHR039C-A	SHM1	P37292	490 aa	Predicted RBP	5.16	□□□□□ -1.58
VMA10	YHR039C-A	JJJ2	P46997	583 aa		5.16	□□□□□ -1.58
VMA10	YHR039C-A	RPL34A	P87262	121 aa	Predicted RBP	5.16	□□□□□ -1.58
VMA10	YHR039C-A	CWC15	Q03772	175 aa	Known RBP	5.16	□□□□□ -1.58
VMA10	YHR039C-A	CDC19	P00549	500 aa	Known RBP	5.15	□□□□□ -1.59
VMA10	YHR039C-A	RPS31	P05759	152 aa	Known RBP	5.15	□□□□□ -1.59
VMA10	YHR039C-A	AHP1	P38013	176 aa	Known RBP	5.15	□□□□□ -1.59
VMA10	YHR039C-A	ACO2	P39533	789 aa		5.15	□□□□□ -1.59
VMA10	YHR039C-A	YNL165W	P53891	406 aa		5.15	□□□□□ -1.59
VMA10	YHR039C-A	IRE1	P32361	1115 aa		5.14	□□□□□ -1.59
VMA10	YHR039C-A	CWH41	P53008	833 aa		5.14	□□□□□ -1.59
VMA10	YHR039C-A	PUN1	Q06991	263 aa		5.14	□□□□□ -1.59
VMA10	YHR039C-A	TPS3	P38426	1054 aa	Known RBP	5.13	□□□□□ -1.59
VMA10	YHR039C-A	UBP15	P50101	1230 aa		5.13	□□□□□ -1.59
VMA10	YHR039C-A	CAF120	P53836	1060 aa		5.13	□□□□□ -1.59
VMA10	YHR039C-A	NAM8	Q00539	523 aa	Known RBP	5.13	□□□□□ -1.59
VMA10	YHR039C-A	Q0182	Q9ZZW1	134 aa		5.13	□□□□□ -1.59
VMA10	YHR039C-A	SRS2	P12954	1174 aa		5.12	□□□□□ -1.59
VMA10	YHR039C-A	GBP2	P25555	427 aa	Known RBP RIP-Chip data	5.12	□□□□□ -1.59	not detected
VMA10	YHR039C-A	HXT5	P38695	592 aa		5.12	□□□□□ -1.59
VMA10	YHR039C-A	YIR007W	P40566	764 aa		5.12	□□□□□ -1.59
VMA10	YHR039C-A	ALD4	P46367	519 aa	Known RBP	5.12	□□□□□ -1.59
VMA10	YHR039C-A	PNP1	Q05788	311 aa		5.12	□□□□□ -1.59
VMA10	YHR039C-A	YDL176W	Q12027	708 aa		5.12	□□□□□ -1.59
VMA10	YHR039C-A	ROG3	P43602	733 aa		5.11	□□□□□ -1.59
VMA10	YHR039C-A	YML020W	Q03722	664 aa		5.11	□□□□□ -1.59
VMA10	YHR039C-A	TY1A-MR1	Q04215	440 aa		5.11	□□□□□ -1.59
VMA10	YHR039C-A	CAB1	Q04430	367 aa		5.11	□□□□□ -1.59
VMA10	YHR039C-A	PSH1	Q12161	406 aa		5.11	□□□□□ -1.59
VMA10	YHR039C-A	PDC6	P26263	563 aa	Known RBP	5.1	□□□□□ -1.59
VMA10	YHR039C-A	MLF3	P32047	452 aa		5.1	□□□□□ -1.59
VMA10	YHR039C-A	SCD5	P34758	872 aa		5.1	□□□□□ -1.59
VMA10	YHR039C-A	YBR197C	P38306	217 aa		5.1	□□□□□ -1.59
VMA10	YHR039C-A	NOP8	Q08287	484 aa	Predicted RBP	5.1	□□□□□ -1.59
VMA10	YHR039C-A	CCP1	P00431	361 aa		5.09	□□□□□ -1.59
VMA10	YHR039C-A	RGA1	P39083	1007 aa		5.08	□□□□□ -1.6
VMA10	YHR039C-A	YTA6	P40328	754 aa		5.08	□□□□□ -1.6
VMA10	YHR039C-A	FOX2	Q02207	900 aa	Known RBP	5.08	□□□□□ -1.6
VMA10	YHR039C-A	UTP4	Q06679	776 aa	Known RBP	5.08	□□□□□ -1.6
VMA10	YHR039C-A	LEU1	P07264	779 aa	Known RBP	5.07	□□□□□ -1.6
VMA10	YHR039C-A	CDC3	P32457	520 aa	Known RBP	5.07	□□□□□ -1.6
VMA10	YHR039C-A	ISC10	P32645	267 aa		5.07	□□□□□ -1.6
VMA10	YHR039C-A	ALD2	P47771	506 aa		5.07	□□□□□ -1.6
VMA10	YHR039C-A	CUZ1	P53899	274 aa		5.07	□□□□□ -1.6
VMA10	YHR039C-A	MRPL33	P20084	86 aa		5.06	□□□□□ -1.6
VMA10	YHR039C-A	FUR4	P05316	633 aa	Known RBP	5.05	□□□□□ -1.6
VMA10	YHR039C-A	VMA3	P25515	160 aa		5.05	□□□□□ -1.6
VMA10	YHR039C-A	KAP122	P32767	1081 aa		5.05	□□□□□ -1.6
VMA10	YHR039C-A	RRN6	P32786	894 aa		5.05	□□□□□ -1.6
VMA10	YHR039C-A	BOL3	P39724	118 aa		5.05	□□□□□ -1.6
VMA10	YHR039C-A	MTO1	P53070	669 aa		5.05	□□□□□ -1.6
VMA10	YHR039C-A	YMR265C	Q03508	461 aa	Known RBP	5.05	□□□□□ -1.6
VMA10	YHR039C-A	DIT1	P21623	536 aa		5.04	□□□□□ -1.6
VMA10	YHR039C-A	BOI1	P38041	980 aa	Known RBP	5.04	□□□□□ -1.6
VMA10	YHR039C-A	MRPL16	P38064	232 aa		5.04	□□□□□ -1.6
VMA10	YHR039C-A	QDR2	P40474	542 aa		5.04	□□□□□ -1.6
VMA10	YHR039C-A	KAR5	Q04746	504 aa		5.04	□□□□□ -1.6
VMA10	YHR039C-A	LSO1	Q3E827	93 aa		5.04	□□□□□ -1.6
VMA10	YHR039C-A	RGP1	P16664	663 aa		5.03	□□□□□ -1.6
VMA10	YHR039C-A	KRE33	P53914	1056 aa	Known RBP	5.03	□□□□□ -1.6
VMA10	YHR039C-A	YPL062W	Q02781	134 aa		5.03	□□□□□ -1.6
VMA10	YHR039C-A	HAT1	Q12341	374 aa		5.03	□□□□□ -1.6
VMA10	YHR039C-A	STB3	Q12427	513 aa		5.03	□□□□□ -1.6
VMA10	YHR039C-A	SPR3	P41901	512 aa		5.02	□□□□□ -1.61
VMA10	YHR039C-A	ADE12	P80210	433 aa	Known RBP	5.02	□□□□□ -1.61
VMA10	YHR039C-A	RPC31	P17890	251 aa		5.01	□□□□□ -1.61
VMA10	YHR039C-A	SKP1	P52286	194 aa		5.01	□□□□□ -1.61
VMA10	YHR039C-A	CUS1	Q02554	436 aa	Predicted RBP	5.01	□□□□□ -1.61
VMA10	YHR039C-A	HPF1	Q05164	967 aa		5.01	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms