RNA–Protein interactions for RNA: YGL173C

XRN1, Transcript of Evolutionarily-conserved 5'-3' exonuclease, yeastyeast

Gene XRN1, Length 4,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
XRN1YGL173C ALD2P47771 506 aa3.95□□□□□ -1.78
XRN1YGL173C TSC11P40061 1430 aa3.95□□□□□ -1.78
XRN1YGL173C TPM2P40414 161 aa3.95□□□□□ -1.78
XRN1YGL173C ENO2P00925 437 aaKnown RBP3.95□□□□□ -1.78
XRN1YGL173C VMA1P17255 1071 aaKnown RBP3.95□□□□□ -1.78
XRN1YGL173C VPS24P36095 224 aaKnown RBP3.95□□□□□ -1.78
XRN1YGL173C RPS0AP32905 252 aaKnown RBP3.94□□□□□ -1.78
XRN1YGL173C TPO2P53283 614 aa3.94□□□□□ -1.78
XRN1YGL173C UFD2P54860 961 aa3.94□□□□□ -1.78
XRN1YGL173C VPS16Q03308 798 aa3.94□□□□□ -1.78
XRN1YGL173C MSB4Q12317 492 aa3.94□□□□□ -1.78
XRN1YGL173C MCM1P11746 286 aa3.94□□□□□ -1.78
XRN1YGL173C GRX4P32642 244 aa3.94□□□□□ -1.78
XRN1YGL173C CST6P40535 587 aa3.94□□□□□ -1.78
XRN1YGL173C RTP1Q12751 981 aa3.94□□□□□ -1.78
XRN1YGL173C NUP159P40477 1460 aa3.94□□□□□ -1.78
XRN1YGL173C ENO1P00924 437 aaKnown RBP3.94□□□□□ -1.78
XRN1YGL173C CPS1P27614 576 aa3.94□□□□□ -1.78
XRN1YGL173C GCD6P32501 712 aaKnown RBP3.94□□□□□ -1.78
XRN1YGL173C TMA64Q04600 565 aaKnown RBP3.94□□□□□ -1.78
XRN1YGL173C POB3Q04636 552 aaKnown RBP3.94□□□□□ -1.78
XRN1YGL173C ERP5P38819 212 aa3.94□□□□□ -1.78
XRN1YGL173C YAP5P40574 245 aa3.94□□□□□ -1.78
XRN1YGL173C NIS1P53939 407 aa3.94□□□□□ -1.78
XRN1YGL173C HAT1Q12341 374 aa3.94□□□□□ -1.78
XRN1YGL173C RTS3P53289 263 aa3.93□□□□□ -1.78
XRN1YGL173C PAP2P53632 584 aaKnown RBP3.93□□□□□ -1.78
XRN1YGL173C FAP1P53971 965 aa3.93□□□□□ -1.78
XRN1YGL173C URN1Q06525 465 aaKnown RBP3.93□□□□□ -1.78
XRN1YGL173C YBL113CQ7M4S9 792 aa3.93□□□□□ -1.78
XRN1YGL173C YGR122WP53272 402 aa3.93□□□□□ -1.78
XRN1YGL173C YNL115CP53925 644 aa3.93□□□□□ -1.78
XRN1YGL173C ALG12P53730 551 aa3.93□□□□□ -1.78
XRN1YGL173C RSC4Q02206 625 aa3.92□□□□□ -1.78
XRN1YGL173C MCM16Q12262 181 aa3.92□□□□□ -1.78
XRN1YGL173C STH1P32597 1359 aa3.92□□□□□ -1.78
XRN1YGL173C DBP1P24784 617 aaKnown RBP3.92□□□□□ -1.78
XRN1YGL173C RRN3P36070 627 aa3.92□□□□□ -1.78
XRN1YGL173C IPL1P38991 367 aa3.92□□□□□ -1.78
XRN1YGL173C UBP12P39538 1254 aa3.92□□□□□ -1.78
XRN1YGL173C SSF2Q12153 453 aaPredicted RBP3.92□□□□□ -1.78
XRN1YGL173C VMR1P38735 1592 aa3.92□□□□□ -1.78
XRN1YGL173C PHO4P07270 312 aaKnown RBP3.92□□□□□ -1.78
XRN1YGL173C MET4P32389 672 aa3.92□□□□□ -1.78
XRN1YGL173C ATH1P48016 1211 aa3.92□□□□□ -1.78
XRN1YGL173C YGR053CP53234 283 aa3.92□□□□□ -1.78
XRN1YGL173C NUP188P52593 1655 aaKnown RBP3.92□□□□□ -1.78
XRN1YGL173C BUD3P25558 1636 aa3.92□□□□□ -1.78
XRN1YGL173C TOA1P32773 286 aa3.92□□□□□ -1.78
XRN1YGL173C UTP4Q06679 776 aaKnown RBP3.92□□□□□ -1.78
XRN1YGL173C YPR084WQ06821 456 aa3.92□□□□□ -1.78
XRN1YGL173C WHI5Q12416 295 aa3.92□□□□□ -1.78
XRN1YGL173C HAA1Q12753 694 aaKnown RBP3.92□□□□□ -1.78
XRN1YGL173C YOR238WQ08634 303 aa3.91□□□□□ -1.78
XRN1YGL173C RAD2P07276 1031 aa3.91□□□□□ -1.78
XRN1YGL173C YEL1P34225 687 aa3.91□□□□□ -1.78
XRN1YGL173C POL32P47110 350 aa3.91□□□□□ -1.78
XRN1YGL173C TRS120Q04183 1289 aa3.91□□□□□ -1.78
XRN1YGL173C VMS1Q04311 632 aaKnown RBP3.91□□□□□ -1.78
XRN1YGL173C ATE1P16639 503 aa3.91□□□□□ -1.78
XRN1YGL173C PUS6P53294 404 aa3.91□□□□□ -1.78
XRN1YGL173C YHL050CP38721 697 aa3.9□□□□□ -1.78
XRN1YGL173C YHR219WP38900 624 aa3.9□□□□□ -1.78
XRN1YGL173C MNL2Q12205 849 aa3.9□□□□□ -1.78
XRN1YGL173C RRI2Q12348 645 aa3.9□□□□□ -1.78
XRN1YGL173C YEL077CQ3E7X8 1277 aa3.9□□□□□ -1.78
XRN1YGL173C NGR1P32831 672 aaKnown RBP3.9□□□□□ -1.78
XRN1YGL173C NUT2Q06213 157 aa3.9□□□□□ -1.78
XRN1YGL173C BRE1Q07457 700 aaKnown RBP3.9□□□□□ -1.78
XRN1YGL173C YPR204WQ08995 1032 aa3.9□□□□□ -1.78
XRN1YGL173C CAT8P39113 1433 aa3.9□□□□□ -1.79
XRN1YGL173C CDC55Q00362 526 aa3.9□□□□□ -1.79
XRN1YGL173C BDF2Q07442 638 aa3.9□□□□□ -1.79
XRN1YGL173C TSC13Q99190 310 aa3.9□□□□□ -1.79
XRN1YGL173C TRS33Q99394 268 aa3.9□□□□□ -1.79
XRN1YGL173C DNF2Q12675 1612 aa3.9□□□□□ -1.79
XRN1YGL173C CIT2P08679 460 aa3.9□□□□□ -1.79
XRN1YGL173C VHR2P40041 505 aa3.9□□□□□ -1.79
XRN1YGL173C COG8Q04632 607 aa3.9□□□□□ -1.79
XRN1YGL173C GGA2P38817 585 aaKnown RBP3.89□□□□□ -1.79
XRN1YGL173C RPA14P50106 137 aa3.89□□□□□ -1.79
XRN1YGL173C NUP192P47054 1683 aa3.89□□□□□ -1.79
XRN1YGL173C PDR1P12383 1068 aa3.89□□□□□ -1.79
XRN1YGL173C VPS27P40343 622 aaKnown RBP3.89□□□□□ -1.79
XRN1YGL173C IOC3P43596 787 aa3.89□□□□□ -1.79
XRN1YGL173C IMP2'P32351 346 aa3.88□□□□□ -1.79
XRN1YGL173C POL5P39985 1022 aaKnown RBP3.88□□□□□ -1.79
XRN1YGL173C SAP155P43612 1002 aa3.88□□□□□ -1.79
XRN1YGL173C SHE9Q04172 456 aa3.88□□□□□ -1.79
XRN1YGL173C MCD1Q12158 566 aa3.88□□□□□ -1.79
XRN1YGL173C RNH70P53331 553 aa3.88□□□□□ -1.79
XRN1YGL173C SNF7P39929 240 aaKnown RBP3.88□□□□□ -1.79
XRN1YGL173C GDE1Q02979 1223 aa3.88□□□□□ -1.79
XRN1YGL173C SEC7P11075 2009 aaKnown RBP3.87□□□□□ -1.79
XRN1YGL173C GUT2P32191 649 aa3.87□□□□□ -1.79
XRN1YGL173C SEC8P32855 1065 aa3.87□□□□□ -1.79
XRN1YGL173C ALD4P46367 519 aaKnown RBP3.87□□□□□ -1.79
XRN1YGL173C SRB7P47822 140 aa3.87□□□□□ -1.79
XRN1YGL173C SAM37P50110 327 aa3.87□□□□□ -1.79
XRN1YGL173C MSH6Q03834 1242 aa3.87□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 8.8 ms