RNA–Protein interactions for RNA: YER172C

BRR2, Transcript of RNA-dependent ATPase RNA helicase (DEIH box), yeastyeast

Gene BRR2, Length 6,492 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRR2YER172C PRY3P47033 881 aa2.1□□□□□ -2.07
BRR2YER172C PTK2P47116 818 aaKnown RBP2.1□□□□□ -2.07
BRR2YER172C RTF1P53064 558 aa2.1□□□□□ -2.07
BRR2YER172C PUS5Q06244 254 aa2.1□□□□□ -2.07
BRR2YER172C TPS3P38426 1054 aaKnown RBP2.1□□□□□ -2.07
BRR2YER172C ETP1P38748 585 aaKnown RBP2.1□□□□□ -2.07
BRR2YER172C HYR1P40581 163 aaKnown RBP2.1□□□□□ -2.07
BRR2YER172C YKL133CP36066 463 aa2.1□□□□□ -2.07
BRR2YER172C MSB4Q12317 492 aa2.1□□□□□ -2.07
BRR2YER172C PRI1P10363 409 aa2.09□□□□□ -2.07
BRR2YER172C BIO2P32451 375 aa2.09□□□□□ -2.07
BRR2YER172C SAF1P38352 637 aa2.09□□□□□ -2.07
BRR2YER172C SHC1P39000 512 aa2.09□□□□□ -2.07
BRR2YER172C RTR1P40084 226 aaPredicted RBP2.09□□□□□ -2.07
BRR2YER172C DNM1P54861 757 aa2.09□□□□□ -2.07
BRR2YER172C PRP45P28004 379 aaPredicted RBP2.09□□□□□ -2.07
BRR2YER172C SVF1Q05515 481 aa2.09□□□□□ -2.07
BRR2YER172C VPS13Q07878 3144 aa2.09□□□□□ -2.07
BRR2YER172C MOT2P34909 587 aaKnown RBP2.09□□□□□ -2.07
BRR2YER172C GYP7P48365 746 aa2.09□□□□□ -2.07
BRR2YER172C CYB2P00175 591 aa2.09□□□□□ -2.08
BRR2YER172C LCB1P25045 558 aaKnown RBP2.09□□□□□ -2.08
BRR2YER172C CLB5P30283 435 aa2.09□□□□□ -2.08
BRR2YER172C NUG1P40010 520 aaKnown RBP2.09□□□□□ -2.08
BRR2YER172C SAP155P43612 1002 aa2.09□□□□□ -2.08
BRR2YER172C ORC1P54784 914 aaPredicted RBP2.09□□□□□ -2.08
BRR2YER172C RAD50P12753 1312 aa2.09□□□□□ -2.08
BRR2YER172C MCM3P24279 971 aaKnown RBP2.09□□□□□ -2.08
BRR2YER172C PES4P39684 611 aa2.09□□□□□ -2.08
BRR2YER172C LYS4P49367 693 aaPredicted RBP2.09□□□□□ -2.08
BRR2YER172C STT4P37297 1900 aa2.08□□□□□ -2.08
BRR2YER172C COQ4O13525 335 aa2.08□□□□□ -2.08
BRR2YER172C LEO1P38439 464 aa2.08□□□□□ -2.08
BRR2YER172C RAT1Q02792 1006 aaKnown RBP2.08□□□□□ -2.08
BRR2YER172C UBX2Q04228 584 aa2.08□□□□□ -2.08
BRR2YER172C HAT1Q12341 374 aa2.08□□□□□ -2.08
BRR2YER172C ICP55P40051 511 aa2.08□□□□□ -2.08
BRR2YER172C PSD2P53037 1138 aaKnown RBP2.08□□□□□ -2.08
BRR2YER172C AOS1Q06624 347 aa2.08□□□□□ -2.08
BRR2YER172C AIM7Q12156 149 aa2.08□□□□□ -2.08
BRR2YER172C SSA2P10592 639 aaKnown RBP2.08□□□□□ -2.08
BRR2YER172C PEP7P32609 515 aa2.08□□□□□ -2.08
BRR2YER172C YKL222CP35995 705 aa2.08□□□□□ -2.08
BRR2YER172C RRT14P40470 206 aa2.08□□□□□ -2.08
BRR2YER172C MTC3P53077 123 aa2.08□□□□□ -2.08
BRR2YER172C KRE2P27809 442 aa2.07□□□□□ -2.08
BRR2YER172C BUD27P43573 796 aaKnown RBP RIP-Chip data2.07□□□□□ -2.08not detected
BRR2YER172C YGL081WP53156 320 aa2.07□□□□□ -2.08
BRR2YER172C RPL22AP05749 121 aaKnown RBP2.07□□□□□ -2.08
BRR2YER172C SPB4P25808 606 aaPredicted RBP2.07□□□□□ -2.08
BRR2YER172C AIM9P40053 627 aaKnown RBP2.07□□□□□ -2.08
BRR2YER172C NOP53Q12080 455 aaKnown RBP2.07□□□□□ -2.08
BRR2YER172C OPI1P21957 404 aa2.07□□□□□ -2.08
BRR2YER172C YBL086CP38177 466 aa2.07□□□□□ -2.08
BRR2YER172C TIF4631P39935 952 aaKnown RBP2.07□□□□□ -2.08
BRR2YER172C FPK1P53739 893 aa2.07□□□□□ -2.08
BRR2YER172C UBR1P19812 1950 aa2.07□□□□□ -2.08
BRR2YER172C UBP1P25037 809 aa2.07□□□□□ -2.08
BRR2YER172C RFT1P38206 574 aaPredicted RBP2.07□□□□□ -2.08
BRR2YER172C RPG1P38249 964 aaKnown RBP2.07□□□□□ -2.08
BRR2YER172C UBP12P39538 1254 aa2.07□□□□□ -2.08
BRR2YER172C YLR407WQ06070 228 aa2.07□□□□□ -2.08
BRR2YER172C RME1P32338 300 aaKnown RBP2.06□□□□□ -2.08
BRR2YER172C MYO3P36006 1272 aa2.06□□□□□ -2.08
BRR2YER172C RPN11P43588 306 aaKnown RBP2.06□□□□□ -2.08
BRR2YER172C GUD1Q07729 489 aa2.06□□□□□ -2.08
BRR2YER172C ILV3P39522 585 aaKnown RBP2.06□□□□□ -2.08
BRR2YER172C CTT1P06115 562 aa2.06□□□□□ -2.08
BRR2YER172C FAR11P53917 953 aa2.06□□□□□ -2.08
BRR2YER172C FCP1Q03254 732 aa2.06□□□□□ -2.08
BRR2YER172C OSH3P38713 996 aaKnown RBP2.06□□□□□ -2.08
BRR2YER172C RRD1P40454 393 aaKnown RBP2.06□□□□□ -2.08
BRR2YER172C ENV11P53246 860 aa2.06□□□□□ -2.08
BRR2YER172C YPL150WQ12152 901 aa2.06□□□□□ -2.08
BRR2YER172C APL2P36000 726 aaPredicted RBP2.06□□□□□ -2.08
BRR2YER172C ALD2P47771 506 aa2.06□□□□□ -2.08
BRR2YER172C RMT2Q03305 412 aa2.06□□□□□ -2.08
BRR2YER172C FUS2Q05670 677 aa2.06□□□□□ -2.08
BRR2YER172C EST1P17214 699 aaPredicted RBP2.05□□□□□ -2.08
BRR2YER172C CSE4P36012 229 aa2.05□□□□□ -2.08
BRR2YER172C POA1P38218 177 aa2.05□□□□□ -2.08
BRR2YER172C YLR326WQ06170 240 aaKnown RBP2.05□□□□□ -2.08
BRR2YER172C PSF3Q12146 194 aa2.05□□□□□ -2.08
BRR2YER172C PUS2P53167 370 aa2.05□□□□□ -2.08
BRR2YER172C DAL5P15365 543 aa2.05□□□□□ -2.08
BRR2YER172C ELM1P32801 640 aa2.05□□□□□ -2.08
BRR2YER172C MSH4P40965 878 aaPredicted RBP2.05□□□□□ -2.08
BRR2YER172C SET4P42948 560 aa2.05□□□□□ -2.08
BRR2YER172C LAM6Q08001 693 aa2.05□□□□□ -2.08
BRR2YER172C GYP5Q12344 894 aa2.05□□□□□ -2.08
BRR2YER172C RVB2Q12464 471 aaKnown RBP2.05□□□□□ -2.08
BRR2YER172C THI6P41835 540 aa2.05□□□□□ -2.08
BRR2YER172C YJL045WP47052 634 aa2.05□□□□□ -2.08
BRR2YER172C HVG1P0CE11 249 aa2.05□□□□□ -2.08
BRR2YER172C HPC2Q01448 625 aa2.05□□□□□ -2.08
BRR2YER172C FRK1Q03002 865 aaPredicted RBP2.05□□□□□ -2.08
BRR2YER172C TRP5P00931 707 aaKnown RBP2.04□□□□□ -2.08
BRR2YER172C KIN1P13185 1064 aa2.04□□□□□ -2.08
BRR2YER172C OPY1P38271 328 aa2.04□□□□□ -2.08
BRR2YER172C PPM2Q08282 695 aa2.04□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 33.1 ms