RNA–Protein interactions for RNA: YER088C

DOT6, Transcript of Protein involved in rRNA and ribosome biogenesis, yeast

Gene DOT6, Length 2,013 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOT6	YER088C	SUM1	P46676	1062 aa		3.61	□□□□□ -1.83
DOT6	YER088C	YJR098C	P47139	656 aa		3.61	□□□□□ -1.83
DOT6	YER088C	SLA1	P32790	1244 aa		3.61	□□□□□ -1.83
DOT6	YER088C	NGR1	P32831	672 aa	Known RBP	3.61	□□□□□ -1.83
DOT6	YER088C	GEF1	P37020	779 aa		3.61	□□□□□ -1.83
DOT6	YER088C	UTP7	P40055	554 aa	Known RBP	3.61	□□□□□ -1.83
DOT6	YER088C	VTC4	P47075	721 aa		3.61	□□□□□ -1.83
DOT6	YER088C	TY1A-DR3	Q12441	440 aa		3.61	□□□□□ -1.83
DOT6	YER088C	RPP2B	P02400	110 aa	Known RBP	3.6	□□□□□ -1.83
DOT6	YER088C	CYT1	P07143	309 aa		3.6	□□□□□ -1.83
DOT6	YER088C	TBS1	P38114	1094 aa		3.6	□□□□□ -1.83
DOT6	YER088C	MSN5	P52918	1224 aa		3.6	□□□□□ -1.83
DOT6	YER088C	PUF6	Q04373	656 aa	Known RBP	3.6	□□□□□ -1.83
DOT6	YER088C	MET22	P32179	357 aa		3.6	□□□□□ -1.83
DOT6	YER088C	DAL1	P32375	460 aa		3.6	□□□□□ -1.83
DOT6	YER088C	DLD3	P39976	496 aa	Known RBP	3.6	□□□□□ -1.83
DOT6	YER088C	GCR2	Q01722	534 aa		3.6	□□□□□ -1.83
DOT6	YER088C	OPT2	Q06593	877 aa		3.6	□□□□□ -1.83
DOT6	YER088C	SRF1	Q12516	437 aa		3.6	□□□□□ -1.83
DOT6	YER088C	MCM1	P11746	286 aa		3.59	□□□□□ -1.83
DOT6	YER088C	SHM1	P37292	490 aa	Predicted RBP	3.59	□□□□□ -1.83
DOT6	YER088C	HXT5	P38695	592 aa		3.59	□□□□□ -1.83
DOT6	YER088C	YNL165W	P53891	406 aa		3.59	□□□□□ -1.83
DOT6	YER088C	RPS31	P05759	152 aa	Known RBP	3.58	□□□□□ -1.84
DOT6	YER088C	LSC2	P53312	427 aa		3.58	□□□□□ -1.84
DOT6	YER088C	LCB5	Q06147	687 aa	Known RBP	3.58	□□□□□ -1.84
DOT6	YER088C	VAN1	P23642	535 aa		3.58	□□□□□ -1.84
DOT6	YER088C	JJJ2	P46997	583 aa		3.58	□□□□□ -1.84
DOT6	YER088C	CAB1	Q04430	367 aa		3.58	□□□□□ -1.84
DOT6	YER088C	TY1A-BL	Q12266	440 aa		3.58	□□□□□ -1.84
DOT6	YER088C	TCB1	Q12466	1186 aa		3.58	□□□□□ -1.84
DOT6	YER088C	RGA2	Q06407	1009 aa		3.57	□□□□□ -1.84
DOT6	YER088C	INO80	P53115	1489 aa		3.56	□□□□□ -1.84
DOT6	YER088C	SRS2	P12954	1174 aa		3.56	□□□□□ -1.84
DOT6	YER088C	GLY1	P37303	387 aa	Known RBP	3.56	□□□□□ -1.84
DOT6	YER088C	ALD4	P46367	519 aa	Known RBP	3.56	□□□□□ -1.84
DOT6	YER088C	YDR444W	Q04093	687 aa		3.56	□□□□□ -1.84
DOT6	YER088C	TRS33	Q99394	268 aa		3.56	□□□□□ -1.84
DOT6	YER088C	CDC19	P00549	500 aa	Known RBP	3.56	□□□□□ -1.84
DOT6	YER088C	BOL3	P39724	118 aa		3.56	□□□□□ -1.84
DOT6	YER088C	RPL34A	P87262	121 aa	Predicted RBP	3.56	□□□□□ -1.84
DOT6	YER088C	PNP1	Q05788	311 aa		3.56	□□□□□ -1.84
DOT6	YER088C	KTR2	P33550	425 aa		3.55	□□□□□ -1.84
DOT6	YER088C	YBR197C	P38306	217 aa		3.55	□□□□□ -1.84
DOT6	YER088C	OSH7	P38755	437 aa		3.55	□□□□□ -1.84
DOT6	YER088C	NAM8	Q00539	523 aa	Known RBP	3.55	□□□□□ -1.84
DOT6	YER088C	UBP2	Q01476	1272 aa		3.55	□□□□□ -1.84
DOT6	YER088C	PUN1	Q06991	263 aa		3.55	□□□□□ -1.84
DOT6	YER088C	IRE1	P32361	1115 aa		3.54	□□□□□ -1.84
DOT6	YER088C	CDC3	P32457	520 aa	Known RBP	3.54	□□□□□ -1.84
DOT6	YER088C	UTP4	Q06679	776 aa	Known RBP	3.54	□□□□□ -1.84
DOT6	YER088C	YDL176W	Q12027	708 aa		3.54	□□□□□ -1.84
DOT6	YER088C	PSH1	Q12161	406 aa		3.54	□□□□□ -1.84
DOT6	YER088C	TRL1	P09880	827 aa	Known RBP	3.54	□□□□□ -1.84
DOT6	YER088C	MLF3	P32047	452 aa		3.54	□□□□□ -1.84
DOT6	YER088C	BOI1	P38041	980 aa	Known RBP	3.54	□□□□□ -1.84
DOT6	YER088C	ACO2	P39533	789 aa		3.54	□□□□□ -1.84
DOT6	YER088C	ALD2	P47771	506 aa		3.54	□□□□□ -1.84
DOT6	YER088C	YLR346C	Q06139	101 aa		3.54	□□□□□ -1.84
DOT6	YER088C	CCP1	P00431	361 aa		3.53	□□□□□ -1.84
DOT6	YER088C	PDC6	P26263	563 aa	Known RBP	3.53	□□□□□ -1.84
DOT6	YER088C	SCD5	P34758	872 aa		3.53	□□□□□ -1.84
DOT6	YER088C	ALA1	P40825	983 aa	Known RBP	3.53	□□□□□ -1.84
DOT6	YER088C	APC11	Q12157	165 aa		3.53	□□□□□ -1.84
DOT6	YER088C	Q0182	Q9ZZW1	134 aa		3.53	□□□□□ -1.84
DOT6	YER088C	AHP1	P38013	176 aa	Known RBP	3.53	□□□□□ -1.84
DOT6	YER088C	UBP15	P50101	1230 aa		3.53	□□□□□ -1.84
DOT6	YER088C	SCW11	P53189	542 aa		3.53	□□□□□ -1.84
DOT6	YER088C	LSO1	Q3E827	93 aa		3.53	□□□□□ -1.84
DOT6	YER088C	LEU1	P07264	779 aa	Known RBP	3.52	□□□□□ -1.85
DOT6	YER088C	MRPL33	P20084	86 aa		3.52	□□□□□ -1.85
DOT6	YER088C	CWH41	P53008	833 aa		3.52	□□□□□ -1.85
DOT6	YER088C	ISC10	P32645	267 aa		3.51	□□□□□ -1.85
DOT6	YER088C	TY1A-MR1	Q04215	440 aa		3.51	□□□□□ -1.85
DOT6	YER088C	RPC31	P17890	251 aa		3.51	□□□□□ -1.85
DOT6	YER088C	SSF1	P38789	453 aa	Predicted RBP	3.51	□□□□□ -1.85
DOT6	YER088C	YIR007W	P40566	764 aa		3.51	□□□□□ -1.85
DOT6	YER088C	ROG3	P43602	733 aa		3.51	□□□□□ -1.85
DOT6	YER088C	FOX2	Q02207	900 aa	Known RBP	3.51	□□□□□ -1.85
DOT6	YER088C	VMA3	P25515	160 aa		3.5	□□□□□ -1.85
DOT6	YER088C	RGA1	P39083	1007 aa		3.5	□□□□□ -1.85
DOT6	YER088C	MDJ2	P42834	146 aa		3.5	□□□□□ -1.85
DOT6	YER088C	ATG1	P53104	897 aa		3.5	□□□□□ -1.85
DOT6	YER088C	NOP8	Q08287	484 aa	Predicted RBP	3.5	□□□□□ -1.85
DOT6	YER088C	HAT1	Q12341	374 aa		3.5	□□□□□ -1.85
DOT6	YER088C	FUR4	P05316	633 aa	Known RBP	3.49	□□□□□ -1.85
DOT6	YER088C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	3.49	□□□□□ -1.85	not detected
DOT6	YER088C	ERP5	P38819	212 aa		3.49	□□□□□ -1.85
DOT6	YER088C	SKP1	P52286	194 aa		3.49	□□□□□ -1.85
DOT6	YER088C	KAR5	Q04746	504 aa		3.49	□□□□□ -1.85
DOT6	YER088C	RPB10	P22139	70 aa		3.49	□□□□□ -1.85
DOT6	YER088C	QDR2	P40474	542 aa		3.49	□□□□□ -1.85
DOT6	YER088C	SPR3	P41901	512 aa		3.49	□□□□□ -1.85
DOT6	YER088C	CAF120	P53836	1060 aa		3.49	□□□□□ -1.85
DOT6	YER088C	YBL113C	Q7M4S9	792 aa		3.49	□□□□□ -1.85
DOT6	YER088C	KAP122	P32767	1081 aa		3.48	□□□□□ -1.85
DOT6	YER088C	CUZ1	P53899	274 aa		3.48	□□□□□ -1.85
DOT6	YER088C	RGP1	P16664	663 aa		3.48	□□□□□ -1.85
DOT6	YER088C	DIT1	P21623	536 aa		3.48	□□□□□ -1.85
DOT6	YER088C	GAR1	P28007	205 aa	Known RBP	3.48	□□□□□ -1.85

Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms