RNA–Protein interactions for RNA: YDR404C

RPB7, Transcript of RNA polymerase II subunit B16, yeastyeast

Gene RPB7, Length 516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB7YDR404C MRX10Q05648 414 aa7.11□□□□□ -1.27
RPB7YDR404C SOH1P38633 127 aa7.1□□□□□ -1.27
RPB7YDR404C DAT1P13483 248 aaKnown RBP7.09□□□□□ -1.27
RPB7YDR404C UTR2P32623 467 aa7.09□□□□□ -1.27
RPB7YDR404C TBS1P38114 1094 aa7.09□□□□□ -1.27
RPB7YDR404C APL6P46682 809 aa7.09□□□□□ -1.27
RPB7YDR404C RIM21P48565 533 aa7.09□□□□□ -1.27
RPB7YDR404C CAF120P53836 1060 aa7.09□□□□□ -1.27
RPB7YDR404C RPL34AP87262 121 aaPredicted RBP7.09□□□□□ -1.27
RPB7YDR404C UTP13Q05946 817 aaKnown RBP7.09□□□□□ -1.27
RPB7YDR404C TCB1Q12466 1186 aa7.09□□□□□ -1.27
RPB7YDR404C PUP1P25043 261 aa7.08□□□□□ -1.28
RPB7YDR404C RGA1P39083 1007 aa7.08□□□□□ -1.28
RPB7YDR404C YML083CQ04526 418 aa7.08□□□□□ -1.28
RPB7YDR404C SIS2P36024 562 aa7.07□□□□□ -1.28
RPB7YDR404C TY1A-BLQ12266 440 aa7.06□□□□□ -1.28
RPB7YDR404C CDC3P32457 520 aaKnown RBP7.05□□□□□ -1.28
RPB7YDR404C TAF2P23255 1407 aa7.04□□□□□ -1.28
RPB7YDR404C SPT2P06843 333 aaPredicted RBP7.04□□□□□ -1.28
RPB7YDR404C TGL4P36165 910 aa7.04□□□□□ -1.28
RPB7YDR404C HAL5P38970 855 aaKnown RBP7.04□□□□□ -1.28
RPB7YDR404C WTM2Q12206 467 aa7.04□□□□□ -1.28
RPB7YDR404C ACO2P39533 789 aa7.03□□□□□ -1.28
RPB7YDR404C YDL176WQ12027 708 aa7.03□□□□□ -1.28
RPB7YDR404C PEP12P32854 288 aa7.02□□□□□ -1.29
RPB7YDR404C HDA3Q06623 655 aa7.02□□□□□ -1.29
RPB7YDR404C BNI1P41832 1953 aa7.02□□□□□ -1.29
RPB7YDR404C RDS2P19541 446 aaKnown RBP7.01□□□□□ -1.29
RPB7YDR404C OSH7P38755 437 aa7□□□□□ -1.29
RPB7YDR404C YIR007WP40566 764 aa7□□□□□ -1.29
RPB7YDR404C CBC2Q08920 208 aaKnown RBP RIP-Chip data7□□□□□ -1.29not detected
RPB7YDR404C SKI3P17883 1432 aaKnown RBP7□□□□□ -1.29
RPB7YDR404C SSK2P53599 1579 aa6.99□□□□□ -1.29
RPB7YDR404C UTP7P40055 554 aaKnown RBP6.99□□□□□ -1.29
RPB7YDR404C YFL034WP43564 1073 aa6.99□□□□□ -1.29
RPB7YDR404C VTC4P47075 721 aa6.99□□□□□ -1.29
RPB7YDR404C MYO2P19524 1574 aaKnown RBP6.99□□□□□ -1.29
RPB7YDR404C SLD2P34252 453 aa6.98□□□□□ -1.29
RPB7YDR404C AIM9P40053 627 aaKnown RBP6.98□□□□□ -1.29
RPB7YDR404C KTR7P40504 517 aa6.98□□□□□ -1.29
RPB7YDR404C ALA1P40825 983 aaKnown RBP6.98□□□□□ -1.29
RPB7YDR404C AHP1P38013 176 aaKnown RBP6.97□□□□□ -1.29
RPB7YDR404C SSF1P38789 453 aaPredicted RBP6.97□□□□□ -1.29
RPB7YDR404C DAL1P32375 460 aa6.96□□□□□ -1.3
RPB7YDR404C ROG3P43602 733 aa6.96□□□□□ -1.3
RPB7YDR404C MSN5P52918 1224 aa6.96□□□□□ -1.3
RPB7YDR404C ECM23Q02710 187 aa6.96□□□□□ -1.3
RPB7YDR404C HAT1Q12341 374 aa6.96□□□□□ -1.3
RPB7YDR404C SUM1P46676 1062 aa6.95□□□□□ -1.3
RPB7YDR404C TY1A-MR1Q04215 440 aa6.95□□□□□ -1.3
RPB7YDR404C CDC25P04821 1589 aa6.95□□□□□ -1.3
RPB7YDR404C YGR035CP53222 116 aa6.94□□□□□ -1.3
RPB7YDR404C DNF1P32660 1571 aa6.94□□□□□ -1.3
RPB7YDR404C CDC19P00549 500 aaKnown RBP6.93□□□□□ -1.3
RPB7YDR404C ESC1Q03661 1658 aaKnown RBP6.93□□□□□ -1.3
RPB7YDR404C SWI5P08153 709 aa6.92□□□□□ -1.3
RPB7YDR404C GAL2P13181 574 aa6.92□□□□□ -1.3
RPB7YDR404C PDI1P17967 522 aaKnown RBP6.92□□□□□ -1.3
RPB7YDR404C SSN3P39073 555 aa6.92□□□□□ -1.3
RPB7YDR404C TSC13Q99190 310 aa6.92□□□□□ -1.3
RPB7YDR404C RPA190P10964 1664 aaKnown RBP6.92□□□□□ -1.3
RPB7YDR404C UBX7P38349 436 aa6.91□□□□□ -1.3
RPB7YDR404C UBP15P50101 1230 aa6.91□□□□□ -1.3
RPB7YDR404C RPS6AP0CX37 236 aaKnown RBP6.9□□□□□ -1.3
RPB7YDR404C RPS6BP0CX38 236 aaPredicted RBP6.9□□□□□ -1.3
RPB7YDR404C NTH2P35172 780 aa6.9□□□□□ -1.3
RPB7YDR404C SEN54Q02825 467 aaPredicted RBP6.9□□□□□ -1.3
RPB7YDR404C LTE1P07866 1435 aa6.9□□□□□ -1.31
RPB7YDR404C UFD4P33202 1483 aa6.9□□□□□ -1.31
RPB7YDR404C HPF1Q05164 967 aa6.89□□□□□ -1.31
RPB7YDR404C MET5P47169 1442 aa6.89□□□□□ -1.31
RPB7YDR404C PHO87P25360 923 aa6.88□□□□□ -1.31
RPB7YDR404C JJJ2P46997 583 aa6.88□□□□□ -1.31
RPB7YDR404C NAM8Q00539 523 aaKnown RBP6.88□□□□□ -1.31
RPB7YDR404C HAP4P14064 554 aa6.87□□□□□ -1.31
RPB7YDR404C HEM3P28789 327 aa6.86□□□□□ -1.31
RPB7YDR404C SLA1P32790 1244 aa6.86□□□□□ -1.31
RPB7YDR404C SIN3P22579 1536 aa6.86□□□□□ -1.31
RPB7YDR404C CCP1P00431 361 aa6.85□□□□□ -1.31
RPB7YDR404C CYT1P07143 309 aa6.85□□□□□ -1.31
RPB7YDR404C TRK2P28584 889 aa6.85□□□□□ -1.31
RPB7YDR404C IRE1P32361 1115 aa6.85□□□□□ -1.31
RPB7YDR404C LYS5P50113 272 aa6.85□□□□□ -1.31
RPB7YDR404C ACS2P52910 683 aaKnown RBP6.85□□□□□ -1.31
RPB7YDR404C CUZ1P53899 274 aa6.85□□□□□ -1.31
RPB7YDR404C TY1A-DR3Q12441 440 aa6.85□□□□□ -1.31
RPB7YDR404C YBL113CQ7M4S9 792 aa6.85□□□□□ -1.31
RPB7YDR404C TPS3P38426 1054 aaKnown RBP6.84□□□□□ -1.31
RPB7YDR404C CEM1P39525 442 aa6.84□□□□□ -1.31
RPB7YDR404C YMR265CQ03508 461 aaKnown RBP6.84□□□□□ -1.31
RPB7YDR404C GAS4Q08271 471 aa6.84□□□□□ -1.31
RPB7YDR404C DPH6Q12429 685 aa6.84□□□□□ -1.31
RPB7YDR404C RKR1Q04781 1562 aa6.83□□□□□ -1.32
RPB7YDR404C IRC20Q06554 1556 aa6.83□□□□□ -1.32
RPB7YDR404C TY1B-BRQ12193 1756 aa6.83□□□□□ -1.32
RPB7YDR404C TY1B-GR3Q12316 1755 aa6.83□□□□□ -1.32
RPB7YDR404C TY1B-ORQ92393 1755 aa6.83□□□□□ -1.32
RPB7YDR404C YTA6P40328 754 aa6.83□□□□□ -1.32
RPB7YDR404C CWC15Q03772 175 aaKnown RBP6.83□□□□□ -1.32
RPB7YDR404C YPQ2Q06328 317 aa6.83□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms