RNA–Protein interactions for RNA: YDR261W-A

YDR261W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YDR261W-A, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR261W-AYDR261W-A CDC19P00549 500 aaKnown RBP6.95□□□□□ -1.3
YDR261W-AYDR261W-A SUM1P46676 1062 aa6.95□□□□□ -1.3
YDR261W-AYDR261W-A TSC13Q99190 310 aa6.95□□□□□ -1.3
YDR261W-AYDR261W-A SLA1P32790 1244 aa6.94□□□□□ -1.3
YDR261W-AYDR261W-A NTH2P35172 780 aa6.94□□□□□ -1.3
YDR261W-AYDR261W-A SIS2P36024 562 aa6.94□□□□□ -1.3
YDR261W-AYDR261W-A MSN5P52918 1224 aa6.94□□□□□ -1.3
YDR261W-AYDR261W-A NAM8Q00539 523 aaKnown RBP6.94□□□□□ -1.3
YDR261W-AYDR261W-A RPS6AP0CX37 236 aaKnown RBP6.93□□□□□ -1.3
YDR261W-AYDR261W-A RPS6BP0CX38 236 aaPredicted RBP6.93□□□□□ -1.3
YDR261W-AYDR261W-A ACS2P52910 683 aaKnown RBP6.93□□□□□ -1.3
YDR261W-AYDR261W-A TY1A-DR3Q12441 440 aa6.93□□□□□ -1.3
YDR261W-AYDR261W-A CPS1P27614 576 aa6.92□□□□□ -1.3
YDR261W-AYDR261W-A TGL4P36165 910 aa6.92□□□□□ -1.3
YDR261W-AYDR261W-A YFL034WP43564 1073 aa6.92□□□□□ -1.3
YDR261W-AYDR261W-A ROG3P43602 733 aa6.92□□□□□ -1.3
YDR261W-AYDR261W-A TY1A-MR1Q04215 440 aa6.92□□□□□ -1.3
YDR261W-AYDR261W-A YPQ2Q06328 317 aa6.92□□□□□ -1.3
YDR261W-AYDR261W-A CCP1P00431 361 aa6.91□□□□□ -1.3
YDR261W-AYDR261W-A GAL2P13181 574 aa6.9□□□□□ -1.3
YDR261W-AYDR261W-A PHO87P25360 923 aa6.9□□□□□ -1.3
YDR261W-AYDR261W-A ALA1P40825 983 aaKnown RBP6.89□□□□□ -1.31
YDR261W-AYDR261W-A SHM1P37292 490 aaPredicted RBP6.88□□□□□ -1.31
YDR261W-AYDR261W-A HAP4P14064 554 aa6.87□□□□□ -1.31
YDR261W-AYDR261W-A PUP1P25043 261 aa6.87□□□□□ -1.31
YDR261W-AYDR261W-A JJJ2P46997 583 aa6.87□□□□□ -1.31
YDR261W-AYDR261W-A ROM1P53046 1155 aa6.87□□□□□ -1.31
YDR261W-AYDR261W-A ECM23Q02710 187 aa6.87□□□□□ -1.31
YDR261W-AYDR261W-A UBP15P50101 1230 aa6.86□□□□□ -1.31
YDR261W-AYDR261W-A RLF2Q12495 606 aa6.86□□□□□ -1.31
YDR261W-AYDR261W-A RPS31P05759 152 aaKnown RBP6.85□□□□□ -1.31
YDR261W-AYDR261W-A CYT1P07143 309 aa6.85□□□□□ -1.31
YDR261W-AYDR261W-A IRE1P32361 1115 aa6.85□□□□□ -1.31
YDR261W-AYDR261W-A AHP1P38013 176 aaKnown RBP6.85□□□□□ -1.31
YDR261W-AYDR261W-A GAS4Q08271 471 aa6.85□□□□□ -1.31
YDR261W-AYDR261W-A YNL165WP53891 406 aa6.84□□□□□ -1.31
YDR261W-AYDR261W-A HPF1Q05164 967 aa6.84□□□□□ -1.31
YDR261W-AYDR261W-A MCM1P11746 286 aa6.82□□□□□ -1.32
YDR261W-AYDR261W-A CUZ1P53899 274 aa6.82□□□□□ -1.32
YDR261W-AYDR261W-A UBP1P25037 809 aa6.81□□□□□ -1.32
YDR261W-AYDR261W-A YML083CQ04526 418 aa6.81□□□□□ -1.32
YDR261W-AYDR261W-A NOB1Q08444 459 aaKnown RBP6.81□□□□□ -1.32
YDR261W-AYDR261W-A PSH1Q12161 406 aa6.81□□□□□ -1.32
YDR261W-AYDR261W-A SSA4P22202 642 aaKnown RBP6.8□□□□□ -1.32
YDR261W-AYDR261W-A PDC6P26263 563 aaKnown RBP6.8□□□□□ -1.32
YDR261W-AYDR261W-A UBX7P38349 436 aa6.8□□□□□ -1.32
YDR261W-AYDR261W-A YGR035CP53222 116 aa6.8□□□□□ -1.32
YDR261W-AYDR261W-A NGR1P32831 672 aaKnown RBP6.79□□□□□ -1.32
YDR261W-AYDR261W-A DIT1P21623 536 aa6.77□□□□□ -1.32
YDR261W-AYDR261W-A VAN1P23642 535 aa6.77□□□□□ -1.32
YDR261W-AYDR261W-A SUV3P32580 737 aa6.77□□□□□ -1.32
YDR261W-AYDR261W-A Q0182Q9ZZW1 134 aa6.77□□□□□ -1.32
YDR261W-AYDR261W-A MLF3P32047 452 aa6.76□□□□□ -1.33
YDR261W-AYDR261W-A YMR265CQ03508 461 aaKnown RBP6.76□□□□□ -1.33
YDR261W-AYDR261W-A TRK2P28584 889 aa6.76□□□□□ -1.33
YDR261W-AYDR261W-A HXT5P38695 592 aa6.76□□□□□ -1.33
YDR261W-AYDR261W-A ALD2P47771 506 aa6.76□□□□□ -1.33
YDR261W-AYDR261W-A LYS5P50113 272 aa6.76□□□□□ -1.33
YDR261W-AYDR261W-A SUB2Q07478 446 aaKnown RBP6.76□□□□□ -1.33
YDR261W-AYDR261W-A LEU1P07264 779 aaKnown RBP6.75□□□□□ -1.33
YDR261W-AYDR261W-A MRPL16P38064 232 aa6.75□□□□□ -1.33
YDR261W-AYDR261W-A KRE33P53914 1056 aaKnown RBP6.75□□□□□ -1.33
YDR261W-AYDR261W-A CEM1P39525 442 aa6.74□□□□□ -1.33
YDR261W-AYDR261W-A ADE12P80210 433 aaKnown RBP6.74□□□□□ -1.33
YDR261W-AYDR261W-A SYT1Q06836 1226 aa6.74□□□□□ -1.33
YDR261W-AYDR261W-A DPH6Q12429 685 aa6.74□□□□□ -1.33
YDR261W-AYDR261W-A JJJ3P47138 172 aa6.73□□□□□ -1.33
YDR261W-AYDR261W-A TRS33Q99394 268 aa6.73□□□□□ -1.33
YDR261W-AYDR261W-A YTA6P40328 754 aa6.72□□□□□ -1.33
YDR261W-AYDR261W-A SPR3P41901 512 aa6.72□□□□□ -1.33
YDR261W-AYDR261W-A YDR461C-AQ2V2P7 80 aa6.72□□□□□ -1.33
YDR261W-AYDR261W-A CAB1Q04430 367 aa6.71□□□□□ -1.34
YDR261W-AYDR261W-A STB3Q12427 513 aa6.71□□□□□ -1.34
YDR261W-AYDR261W-A SCD5P34758 872 aa6.7□□□□□ -1.34
YDR261W-AYDR261W-A CWH41P53008 833 aa6.7□□□□□ -1.34
YDR261W-AYDR261W-A CWC15Q03772 175 aaKnown RBP6.7□□□□□ -1.34
YDR261W-AYDR261W-A PUF6Q04373 656 aaKnown RBP6.7□□□□□ -1.34
YDR261W-AYDR261W-A UTP4Q06679 776 aaKnown RBP6.7□□□□□ -1.34
YDR261W-AYDR261W-A RGP1P16664 663 aa6.69□□□□□ -1.34
YDR261W-AYDR261W-A YBR197CP38306 217 aa6.68□□□□□ -1.34
YDR261W-AYDR261W-A ALD4P46367 519 aaKnown RBP6.68□□□□□ -1.34
YDR261W-AYDR261W-A MTO1P53070 669 aa6.68□□□□□ -1.34
YDR261W-AYDR261W-A TAF7Q05021 590 aa6.68□□□□□ -1.34
YDR261W-AYDR261W-A PUN1Q06991 263 aa6.68□□□□□ -1.34
YDR261W-AYDR261W-A FPS1P23900 669 aa6.67□□□□□ -1.34
YDR261W-AYDR261W-A KAP122P32767 1081 aa6.67□□□□□ -1.34
YDR261W-AYDR261W-A TPS3P38426 1054 aaKnown RBP6.66□□□□□ -1.34
YDR261W-AYDR261W-A SRS2P12954 1174 aa6.65□□□□□ -1.35
YDR261W-AYDR261W-A FOX2Q02207 900 aaKnown RBP6.65□□□□□ -1.35
YDR261W-AYDR261W-A MRPL33P20084 86 aa6.64□□□□□ -1.35
YDR261W-AYDR261W-A MSC7P38694 644 aa6.64□□□□□ -1.35
YDR261W-AYDR261W-A QDR2P40474 542 aa6.64□□□□□ -1.35
YDR261W-AYDR261W-A SKP1P52286 194 aa6.64□□□□□ -1.35
YDR261W-AYDR261W-A VMA3P25515 160 aa6.63□□□□□ -1.35
YDR261W-AYDR261W-A ISC10P32645 267 aa6.63□□□□□ -1.35
YDR261W-AYDR261W-A TY1A-DR2Q03964 440 aaKnown RBP6.63□□□□□ -1.35
YDR261W-AYDR261W-A RPC31P17890 251 aa6.62□□□□□ -1.35
YDR261W-AYDR261W-A CUS1Q02554 436 aaPredicted RBP6.62□□□□□ -1.35
YDR261W-AYDR261W-A PNP1Q05788 311 aa6.62□□□□□ -1.35
YDR261W-AYDR261W-A NAB2P32505 525 aaKnown RBP RIP-Chip data6.61□□□□□ -1.35not detected
Retrieved 100 of 5,963 RNA–protein pairs in 52.8 ms