RNA–Protein interactions for RNA: YDL223C

HBT1, Transcript of Shmoo tip protein, substrate of Hub1p ubiquitin-like protein, yeast

Gene HBT1, Length 3,141 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HBT1	YDL223C	YRF1-8	P0CX22	1796 aa		4.58	□□□□□ -1.68
HBT1	YDL223C	SUV3	P32580	737 aa		4.58	□□□□□ -1.68
HBT1	YDL223C	TEC1	P18412	486 aa		4.58	□□□□□ -1.68
HBT1	YDL223C	PHO87	P25360	923 aa		4.58	□□□□□ -1.68
HBT1	YDL223C	TY1B-JR2	P47100	1755 aa	Known RBP	4.57	□□□□□ -1.68
HBT1	YDL223C	TY1B-ER2	Q03619	1755 aa		4.57	□□□□□ -1.68
HBT1	YDL223C	TY1B-MR1	Q04214	1755 aa		4.57	□□□□□ -1.68
HBT1	YDL223C	TY1B-MR2	Q04670	1755 aa	Known RBP	4.57	□□□□□ -1.68
HBT1	YDL223C	TY1B-LR1	Q12088	1755 aa	Known RBP	4.57	□□□□□ -1.68
HBT1	YDL223C	TY1B-NL1	Q12112	1755 aa		4.57	□□□□□ -1.68
HBT1	YDL223C	TY1B-GR1	Q12141	1755 aa		4.57	□□□□□ -1.68
HBT1	YDL223C	TY1B-BL	Q12490	1755 aa		4.57	□□□□□ -1.68
HBT1	YDL223C	PDC1	P06169	563 aa	Known RBP	4.57	□□□□□ -1.68
HBT1	YDL223C	BOI1	P38041	980 aa	Known RBP	4.57	□□□□□ -1.68
HBT1	YDL223C	OCA5	P38738	679 aa		4.57	□□□□□ -1.68
HBT1	YDL223C	NUT2	Q06213	157 aa		4.57	□□□□□ -1.68
HBT1	YDL223C	YPR097W	Q06839	1073 aa		4.57	□□□□□ -1.68
HBT1	YDL223C	PDI1	P17967	522 aa	Known RBP	4.57	□□□□□ -1.68
HBT1	YDL223C	RPA14	P50106	137 aa		4.57	□□□□□ -1.68
HBT1	YDL223C	YNL035C	P53962	389 aa	Known RBP	4.57	□□□□□ -1.68
HBT1	YDL223C	YOR1	P53049	1477 aa		4.57	□□□□□ -1.68
HBT1	YDL223C	GCD11	P32481	527 aa	Known RBP	4.57	□□□□□ -1.68
HBT1	YDL223C	SEC8	P32855	1065 aa		4.57	□□□□□ -1.68
HBT1	YDL223C	NTE1	Q04958	1679 aa		4.56	□□□□□ -1.68
HBT1	YDL223C	MET4	P32389	672 aa		4.56	□□□□□ -1.68
HBT1	YDL223C	STE20	Q03497	939 aa	Known RBP	4.56	□□□□□ -1.68
HBT1	YDL223C	SMC4	Q12267	1418 aa		4.56	□□□□□ -1.68
HBT1	YDL223C	SEC20	P28791	383 aa		4.56	□□□□□ -1.68
HBT1	YDL223C	GEA2	P39993	1459 aa	Known RBP	4.56	□□□□□ -1.68
HBT1	YDL223C	TRM732	Q03496	1420 aa		4.56	□□□□□ -1.68
HBT1	YDL223C	OYE2	Q03558	400 aa	Known RBP	4.55	□□□□□ -1.68
HBT1	YDL223C	MAG2	Q06436	670 aa	Known RBP	4.55	□□□□□ -1.68
HBT1	YDL223C	ATG1	P53104	897 aa		4.55	□□□□□ -1.68
HBT1	YDL223C	GPI13	Q07830	1017 aa		4.55	□□□□□ -1.68
HBT1	YDL223C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
HBT1	YDL223C	GUT2	P32191	649 aa		4.55	□□□□□ -1.68
HBT1	YDL223C	RTG1	P32607	177 aa		4.55	□□□□□ -1.68
HBT1	YDL223C	IXR1	P33417	597 aa		4.55	□□□□□ -1.68
HBT1	YDL223C	PPX1	P38698	397 aa		4.55	□□□□□ -1.68
HBT1	YDL223C	QDR1	P40475	563 aa		4.55	□□□□□ -1.68
HBT1	YDL223C	PUN1	Q06991	263 aa		4.55	□□□□□ -1.68
HBT1	YDL223C	LDB19	Q12502	818 aa		4.55	□□□□□ -1.68
HBT1	YDL223C	RPO21	P04050	1733 aa	Known RBP	4.54	□□□□□ -1.68
HBT1	YDL223C	GLO3	P38682	493 aa	Known RBP	4.54	□□□□□ -1.68
HBT1	YDL223C	FYV10	P40492	516 aa		4.54	□□□□□ -1.68
HBT1	YDL223C	THI12	P42883	340 aa		4.54	□□□□□ -1.68
HBT1	YDL223C	THI5	P43534	340 aa		4.54	□□□□□ -1.68
HBT1	YDL223C	THI11	P47183	340 aa		4.54	□□□□□ -1.68
HBT1	YDL223C	SPP1	Q03012	353 aa		4.54	□□□□□ -1.68
HBT1	YDL223C	THI13	Q07748	340 aa		4.54	□□□□□ -1.68
HBT1	YDL223C	STU1	P38198	1513 aa		4.54	□□□□□ -1.68
HBT1	YDL223C	SPP41	P38904	1435 aa		4.53	□□□□□ -1.68
HBT1	YDL223C	TSC13	Q99190	310 aa		4.53	□□□□□ -1.68
HBT1	YDL223C	YTA7	P40340	1379 aa		4.53	□□□□□ -1.68
HBT1	YDL223C	HAP4	P14064	554 aa		4.53	□□□□□ -1.68
HBT1	YDL223C	NPL4	P33755	580 aa		4.53	□□□□□ -1.68
HBT1	YDL223C	NUP159	P40477	1460 aa		4.52	□□□□□ -1.69
HBT1	YDL223C	MET1	P36150	593 aa		4.52	□□□□□ -1.69
HBT1	YDL223C	ALD4	P46367	519 aa	Known RBP	4.52	□□□□□ -1.69
HBT1	YDL223C	SRS2	P12954	1174 aa		4.52	□□□□□ -1.69
HBT1	YDL223C	HAP5	Q02516	242 aa		4.52	□□□□□ -1.69
HBT1	YDL223C	MIP1	P15801	1254 aa		4.52	□□□□□ -1.69
HBT1	YDL223C	KTR2	P33550	425 aa		4.52	□□□□□ -1.69
HBT1	YDL223C	RRN7	P40992	514 aa		4.52	□□□□□ -1.69
HBT1	YDL223C	ISR1	Q06098	443 aa	Known RBP	4.52	□□□□□ -1.69
HBT1	YDL223C	ALR1	Q08269	859 aa		4.52	□□□□□ -1.69
HBT1	YDL223C	VTH1	P40438	1549 aa		4.52	□□□□□ -1.69
HBT1	YDL223C	VTH2	P40890	1549 aa		4.52	□□□□□ -1.69
HBT1	YDL223C	VAC17	P25591	423 aa		4.51	□□□□□ -1.69
HBT1	YDL223C	YJR107W	P47145	328 aa		4.51	□□□□□ -1.69
HBT1	YDL223C	ELP4	Q02884	456 aa	Known RBP	4.51	□□□□□ -1.69
HBT1	YDL223C	VPS15	P22219	1454 aa		4.51	□□□□□ -1.69
HBT1	YDL223C	HDA3	Q06623	655 aa		4.51	□□□□□ -1.69
HBT1	YDL223C	GAS4	Q08271	471 aa		4.51	□□□□□ -1.69
HBT1	YDL223C	MCM2	P29469	868 aa		4.5	□□□□□ -1.69
HBT1	YDL223C	SEC61	P32915	480 aa		4.5	□□□□□ -1.69
HBT1	YDL223C	UTP13	Q05946	817 aa	Known RBP	4.5	□□□□□ -1.69
HBT1	YDL223C	ASF1	P32447	279 aa		4.5	□□□□□ -1.69
HBT1	YDL223C	HXT10	P43581	546 aa		4.5	□□□□□ -1.69
HBT1	YDL223C	SPR28	Q04921	423 aa		4.5	□□□□□ -1.69
HBT1	YDL223C	YDL129W	Q07555	291 aa		4.5	□□□□□ -1.69
HBT1	YDL223C	TSC11	P40061	1430 aa		4.5	□□□□□ -1.69
HBT1	YDL223C	FUR4	P05316	633 aa	Known RBP	4.5	□□□□□ -1.69
HBT1	YDL223C	ARH1	P48360	493 aa		4.5	□□□□□ -1.69
HBT1	YDL223C	JIP5	Q06214	492 aa	Predicted RBP	4.5	□□□□□ -1.69
HBT1	YDL223C	MNL2	Q12205	849 aa		4.5	□□□□□ -1.69
HBT1	YDL223C	MOD5	P07884	428 aa		4.49	□□□□□ -1.69
HBT1	YDL223C	AIM9	P40053	627 aa	Known RBP	4.49	□□□□□ -1.69
HBT1	YDL223C	TOS4	Q06266	489 aa		4.49	□□□□□ -1.69
HBT1	YDL223C	RPB10	P22139	70 aa		4.49	□□□□□ -1.69
HBT1	YDL223C	ACF4	P47129	309 aa		4.49	□□□□□ -1.69
HBT1	YDL223C	LSO1	Q3E827	93 aa		4.49	□□□□□ -1.69
HBT1	YDL223C	BUD31	P25337	157 aa	Predicted RBP	4.48	□□□□□ -1.69
HBT1	YDL223C	MMS1	Q06211	1407 aa		4.48	□□□□□ -1.69
HBT1	YDL223C	IRC20	Q06554	1556 aa		4.48	□□□□□ -1.69
HBT1	YDL223C	NTH2	P35172	780 aa		4.48	□□□□□ -1.69
HBT1	YDL223C	MYO4	P32492	1471 aa		4.47	□□□□□ -1.69
HBT1	YDL223C	DRS2	P39524	1355 aa		4.47	□□□□□ -1.69
HBT1	YDL223C	VAN1	P23642	535 aa		4.47	□□□□□ -1.69
HBT1	YDL223C	RRD1	P40454	393 aa	Known RBP	4.47	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 9.2 ms