RNA–Protein interactions for RNA: YBR102C

EXO84, Transcript of Exocyst subunit with dual roles in exocytosis and spliceosome assembly, yeast

Gene EXO84, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cellular bud .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
EXO84	YBR102C	TPM2	P40414	161 aa		3.81	□□□□□ -1.8
EXO84	YBR102C	IOC3	P43596	787 aa		3.81	□□□□□ -1.8
EXO84	YBR102C	ACF4	P47129	309 aa		3.81	□□□□□ -1.8
EXO84	YBR102C	ALG12	P53730	551 aa		3.81	□□□□□ -1.8
EXO84	YBR102C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	3.81	□□□□□ -1.8	not detected
EXO84	YBR102C	LSO1	Q3E827	93 aa		3.81	□□□□□ -1.8
EXO84	YBR102C	HAP4	P14064	554 aa		3.81	□□□□□ -1.8
EXO84	YBR102C	MNN4	P36044	1178 aa		3.81	□□□□□ -1.8
EXO84	YBR102C	TAT2	P38967	592 aa		3.81	□□□□□ -1.8
EXO84	YBR102C	ALD3	P54114	506 aa		3.81	□□□□□ -1.8
EXO84	YBR102C	STE20	Q03497	939 aa	Known RBP	3.81	□□□□□ -1.8
EXO84	YBR102C	SPR28	Q04921	423 aa		3.81	□□□□□ -1.8
EXO84	YBR102C	JIP5	Q06214	492 aa	Predicted RBP	3.81	□□□□□ -1.8
EXO84	YBR102C	PHO4	P07270	312 aa	Known RBP	3.8	□□□□□ -1.8
EXO84	YBR102C	SSB1	P11484	613 aa	Known RBP	3.8	□□□□□ -1.8
EXO84	YBR102C	EAP1	P36041	632 aa	Known RBP	3.8	□□□□□ -1.8
EXO84	YBR102C	GLO3	P38682	493 aa	Known RBP	3.8	□□□□□ -1.8
EXO84	YBR102C	SSB2	P40150	613 aa	Known RBP	3.8	□□□□□ -1.8
EXO84	YBR102C	YOL057W	Q08225	711 aa		3.8	□□□□□ -1.8
EXO84	YBR102C	MOD5	P07884	428 aa		3.79	□□□□□ -1.8
EXO84	YBR102C	VAC17	P25591	423 aa		3.79	□□□□□ -1.8
EXO84	YBR102C	TFG1	P41895	735 aa	Predicted RBP	3.79	□□□□□ -1.8
EXO84	YBR102C	PUN1	Q06991	263 aa		3.79	□□□□□ -1.8
EXO84	YBR102C	GAS4	Q08271	471 aa		3.79	□□□□□ -1.8
EXO84	YBR102C	APC11	Q12157	165 aa		3.79	□□□□□ -1.8
EXO84	YBR102C	MCM2	P29469	868 aa		3.79	□□□□□ -1.8
EXO84	YBR102C	GRX4	P32642	244 aa		3.79	□□□□□ -1.8
EXO84	YBR102C	YFR016C	P43597	1233 aa	Known RBP	3.79	□□□□□ -1.8
EXO84	YBR102C	GUT2	P32191	649 aa		3.78	□□□□□ -1.8
EXO84	YBR102C	SRP40	P32583	406 aa	Predicted RBP	3.78	□□□□□ -1.8
EXO84	YBR102C	ULI1	P43604	169 aa		3.78	□□□□□ -1.8
EXO84	YBR102C	BRE1	Q07457	700 aa	Known RBP	3.78	□□□□□ -1.8
EXO84	YBR102C	GAL11	P19659	1081 aa		3.78	□□□□□ -1.8
EXO84	YBR102C	UBP1	P25037	809 aa		3.78	□□□□□ -1.8
EXO84	YBR102C	VAC8	P39968	578 aa		3.78	□□□□□ -1.8
EXO84	YBR102C	DAK2	P43550	591 aa		3.78	□□□□□ -1.8
EXO84	YBR102C	KIP3	P53086	805 aa	Known RBP	3.78	□□□□□ -1.8
EXO84	YBR102C	TBF1	Q02457	562 aa		3.78	□□□□□ -1.8
EXO84	YBR102C	CAB1	Q04430	367 aa		3.78	□□□□□ -1.8
EXO84	YBR102C	HDA3	Q06623	655 aa		3.78	□□□□□ -1.8
EXO84	YBR102C	RPB10	P22139	70 aa		3.77	□□□□□ -1.81
EXO84	YBR102C	YKL091C	P33324	310 aa	Known RBP	3.77	□□□□□ -1.81
EXO84	YBR102C	ISW1	P38144	1129 aa		3.77	□□□□□ -1.81
EXO84	YBR102C	YBR197C	P38306	217 aa		3.77	□□□□□ -1.81
EXO84	YBR102C	RGA1	P39083	1007 aa		3.77	□□□□□ -1.81
EXO84	YBR102C	MTO1	P53070	669 aa		3.77	□□□□□ -1.81
EXO84	YBR102C	YNL035C	P53962	389 aa	Known RBP	3.77	□□□□□ -1.81
EXO84	YBR102C	YDL121C	Q07541	149 aa		3.77	□□□□□ -1.81
EXO84	YBR102C	FUR4	P05316	633 aa	Known RBP	3.77	□□□□□ -1.81
EXO84	YBR102C	RPA135	P22138	1203 aa	Known RBP	3.77	□□□□□ -1.81
EXO84	YBR102C	TPD3	P31383	635 aa		3.77	□□□□□ -1.81
EXO84	YBR102C	HXT10	P43581	546 aa		3.77	□□□□□ -1.81
EXO84	YBR102C	VPS16	Q03308	798 aa		3.77	□□□□□ -1.81
EXO84	YBR102C	ISR1	Q06098	443 aa	Known RBP	3.77	□□□□□ -1.81
EXO84	YBR102C	MIP1	P15801	1254 aa		3.76	□□□□□ -1.81
EXO84	YBR102C	TOA1	P32773	286 aa		3.76	□□□□□ -1.81
EXO84	YBR102C	NGR1	P32831	672 aa	Known RBP	3.76	□□□□□ -1.81
EXO84	YBR102C	BCK2	P33306	851 aa		3.76	□□□□□ -1.81
EXO84	YBR102C	AIM9	P40053	627 aa	Known RBP	3.76	□□□□□ -1.81
EXO84	YBR102C	AIM21	P40563	679 aa		3.76	□□□□□ -1.81
EXO84	YBR102C	BUD6	P41697	788 aa		3.76	□□□□□ -1.81
EXO84	YBR102C	THI12	P42883	340 aa		3.76	□□□□□ -1.81
EXO84	YBR102C	THI5	P43534	340 aa		3.76	□□□□□ -1.81
EXO84	YBR102C	TY4A-J	P47023	414 aa		3.76	□□□□□ -1.81
EXO84	YBR102C	THI11	P47183	340 aa		3.76	□□□□□ -1.81
EXO84	YBR102C	ELP4	Q02884	456 aa	Known RBP	3.76	□□□□□ -1.81
EXO84	YBR102C	RPN4	Q03465	531 aa		3.76	□□□□□ -1.81
EXO84	YBR102C	TRS120	Q04183	1289 aa		3.76	□□□□□ -1.81
EXO84	YBR102C	THI13	Q07748	340 aa		3.76	□□□□□ -1.81
EXO84	YBR102C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	3.75	□□□□□ -1.81	not detected
EXO84	YBR102C	POB3	Q04636	552 aa	Known RBP	3.75	□□□□□ -1.81
EXO84	YBR102C	ALR1	Q08269	859 aa		3.75	□□□□□ -1.81
EXO84	YBR102C	SSF2	Q12153	453 aa	Predicted RBP	3.75	□□□□□ -1.81
EXO84	YBR102C	VMA4	P22203	233 aa	Known RBP	3.75	□□□□□ -1.81
EXO84	YBR102C	GCD11	P32481	527 aa	Known RBP	3.75	□□□□□ -1.81
EXO84	YBR102C	RRD1	P40454	393 aa	Known RBP	3.75	□□□□□ -1.81
EXO84	YBR102C	ALD6	P54115	500 aa	Known RBP	3.75	□□□□□ -1.81
EXO84	YBR102C	NSE3	Q05541	303 aa		3.75	□□□□□ -1.81
EXO84	YBR102C	PIN2	Q12057	282 aa		3.75	□□□□□ -1.81
EXO84	YBR102C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	3.74	□□□□□ -1.81	not detected
EXO84	YBR102C	NTH2	P35172	780 aa		3.74	□□□□□ -1.81
EXO84	YBR102C	BOI2	P39969	1040 aa		3.74	□□□□□ -1.81
EXO84	YBR102C	HAP5	Q02516	242 aa		3.74	□□□□□ -1.81
EXO84	YBR102C	RPT1	P33299	467 aa	Known RBP	3.74	□□□□□ -1.81
EXO84	YBR102C	ENP1	P38333	483 aa	Known RBP	3.74	□□□□□ -1.81
EXO84	YBR102C	HXT5	P38695	592 aa		3.74	□□□□□ -1.81
EXO84	YBR102C	NOP2	P40991	618 aa	Known RBP	3.74	□□□□□ -1.81
EXO84	YBR102C	ARH1	P48360	493 aa		3.74	□□□□□ -1.81
EXO84	YBR102C	SWI5	P08153	709 aa		3.73	□□□□□ -1.81
EXO84	YBR102C	RTG1	P32607	177 aa		3.73	□□□□□ -1.81
EXO84	YBR102C	SEC61	P32915	480 aa		3.73	□□□□□ -1.81
EXO84	YBR102C	MPE1	P35728	441 aa	Known RBP	3.73	□□□□□ -1.81
EXO84	YBR102C	RRN7	P40992	514 aa		3.73	□□□□□ -1.81
EXO84	YBR102C	YJR142W	P47173	342 aa		3.73	□□□□□ -1.81
EXO84	YBR102C	VAN1	P23642	535 aa		3.73	□□□□□ -1.81
EXO84	YBR102C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	3.73	□□□□□ -1.81	not detected
EXO84	YBR102C	MGE1	P38523	228 aa		3.73	□□□□□ -1.81
EXO84	YBR102C	DNM1	P54861	757 aa		3.73	□□□□□ -1.81
EXO84	YBR102C	GIR2	Q03768	265 aa	Predicted RBP	3.73	□□□□□ -1.81
EXO84	YBR102C	ECM16	Q04217	1267 aa	Known RBP	3.73	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms