RNA–Protein interactions for RNA: YBR005W

RCR1, Transcript of Protein of the ER membrane involved in cell wall chitin deposition, yeast

Gene RCR1, Length 642 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RCR1	YBR005W	PEA2	P40091	420 aa		10.36	□□□□□ -0.75
RCR1	YBR005W	CRF1	Q04930	467 aa		10.36	□□□□□ -0.75
RCR1	YBR005W	TYW1	Q08960	810 aa	Known RBP	10.36	□□□□□ -0.75
RCR1	YBR005W	YIL089W	P40500	205 aa		10.35	□□□□□ -0.75
RCR1	YBR005W	FET4	P40988	552 aa		10.35	□□□□□ -0.75
RCR1	YBR005W	CWC15	Q03772	175 aa	Known RBP	10.34	□□□□□ -0.75
RCR1	YBR005W	UBX2	Q04228	584 aa		10.34	□□□□□ -0.75
RCR1	YBR005W	YPR204W	Q08995	1032 aa		10.34	□□□□□ -0.75
RCR1	YBR005W	SRF1	Q12516	437 aa		10.34	□□□□□ -0.75
RCR1	YBR005W	VPS64	Q03944	604 aa		10.33	□□□□□ -0.76
RCR1	YBR005W	TIF6	Q12522	245 aa	Known RBP	10.33	□□□□□ -0.76
RCR1	YBR005W	TOM1	Q03280	3268 aa		10.32	□□□□□ -0.76
RCR1	YBR005W	EMP47	P43555	445 aa		10.32	□□□□□ -0.76
RCR1	YBR005W	YGR117C	P53270	476 aa		10.32	□□□□□ -0.76
RCR1	YBR005W	IOC4	Q04213	475 aa		10.32	□□□□□ -0.76
RCR1	YBR005W	HKR1	P41809	1802 aa		10.31	□□□□□ -0.76
RCR1	YBR005W	APL2	P36000	726 aa	Predicted RBP	10.31	□□□□□ -0.76
RCR1	YBR005W	BSD2	P38356	321 aa		10.31	□□□□□ -0.76
RCR1	YBR005W	RTR1	P40084	226 aa	Predicted RBP	10.31	□□□□□ -0.76
RCR1	YBR005W	PKH1	Q03407	766 aa		10.31	□□□□□ -0.76
RCR1	YBR005W	DCD1	P06773	312 aa		10.3	□□□□□ -0.76
RCR1	YBR005W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	10.3	□□□□□ -0.76	RIP-Chip
RCR1	YBR005W	TRM44	Q02648	567 aa	Known RBP	10.3	□□□□□ -0.76
RCR1	YBR005W	YLR271W	Q06152	274 aa		10.3	□□□□□ -0.76
RCR1	YBR005W	DNM1	P54861	757 aa		10.29	□□□□□ -0.76
RCR1	YBR005W	BMS1	Q08965	1183 aa	Known RBP	10.29	□□□□□ -0.76
RCR1	YBR005W	PRD1	P25375	712 aa		10.28	□□□□□ -0.76
RCR1	YBR005W	RRP46	P53256	223 aa	Predicted RBP	10.28	□□□□□ -0.76
RCR1	YBR005W	RRG1	Q12167	365 aa	Predicted RBP	10.28	□□□□□ -0.76
RCR1	YBR005W	DPH6	Q12429	685 aa		10.27	□□□□□ -0.77
RCR1	YBR005W	SDH2	P21801	266 aa		10.26	□□□□□ -0.77
RCR1	YBR005W	RRT6	P53117	311 aa	Predicted RBP	10.26	□□□□□ -0.77
RCR1	YBR005W	SEN54	Q02825	467 aa	Predicted RBP	10.26	□□□□□ -0.77
RCR1	YBR005W	COQ4	O13525	335 aa		10.25	□□□□□ -0.77
RCR1	YBR005W	GAP1	P19145	602 aa	Predicted RBP	10.25	□□□□□ -0.77
RCR1	YBR005W	RSC30	P38781	883 aa		10.25	□□□□□ -0.77
RCR1	YBR005W	GYP7	P48365	746 aa		10.25	□□□□□ -0.77
RCR1	YBR005W	YOL057W	Q08225	711 aa		10.25	□□□□□ -0.77
RCR1	YBR005W	FIG2	P25653	1609 aa		10.25	□□□□□ -0.77
RCR1	YBR005W	HPR1	P17629	752 aa	Known RBP	10.24	□□□□□ -0.77
RCR1	YBR005W	KRE2	P27809	442 aa		10.24	□□□□□ -0.77
RCR1	YBR005W	AFG2	P32794	780 aa		10.24	□□□□□ -0.77
RCR1	YBR005W	ZDS2	P54786	942 aa		10.23	□□□□□ -0.77
RCR1	YBR005W	SUP35	P05453	685 aa	Known RBP	10.22	□□□□□ -0.77
RCR1	YBR005W	HVG1	P0CE11	249 aa		10.22	□□□□□ -0.77
RCR1	YBR005W	VPS4	P52917	437 aa		10.22	□□□□□ -0.77
RCR1	YBR005W	NCS6	P53088	359 aa		10.22	□□□□□ -0.77
RCR1	YBR005W	GSC2	P40989	1895 aa		10.21	□□□□□ -0.77
RCR1	YBR005W	ICP55	P40051	511 aa		10.21	□□□□□ -0.77
RCR1	YBR005W	CST6	P40535	587 aa		10.21	□□□□□ -0.77
RCR1	YBR005W	CST9	Q06032	482 aa		10.21	□□□□□ -0.77
RCR1	YBR005W	YBR287W	P38355	427 aa		10.2	□□□□□ -0.78
RCR1	YBR005W	TRP5	P00931	707 aa	Known RBP	10.19	□□□□□ -0.78
RCR1	YBR005W	CSR2	Q12734	1121 aa		10.19	□□□□□ -0.78
RCR1	YBR005W	MAC1	P35192	417 aa		10.18	□□□□□ -0.78
RCR1	YBR005W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	10.18	□□□□□ -0.78	not detected
RCR1	YBR005W	YJR008W	P47085	338 aa		10.18	□□□□□ -0.78
RCR1	YBR005W	PRP42	Q03776	544 aa	Known RBP	10.18	□□□□□ -0.78
RCR1	YBR005W	PSF3	Q12146	194 aa		10.18	□□□□□ -0.78
RCR1	YBR005W	SET4	P42948	560 aa		10.16	□□□□□ -0.78
RCR1	YBR005W	PSD2	P53037	1138 aa	Known RBP	10.16	□□□□□ -0.78
RCR1	YBR005W	GAS5	Q08193	484 aa		10.16	□□□□□ -0.78
RCR1	YBR005W	SAC3	P46674	1301 aa		10.15	□□□□□ -0.78
RCR1	YBR005W	CBP1	P07252	654 aa		10.15	□□□□□ -0.78
RCR1	YBR005W	GAL2	P13181	574 aa		10.15	□□□□□ -0.78
RCR1	YBR005W	RPT4	P53549	437 aa	Known RBP	10.15	□□□□□ -0.78
RCR1	YBR005W	ACK1	Q07622	623 aa	Predicted RBP	10.15	□□□□□ -0.78
RCR1	YBR005W	SWI1	P09547	1314 aa		10.14	□□□□□ -0.79
RCR1	YBR005W	NUP133	P36161	1157 aa		10.14	□□□□□ -0.79
RCR1	YBR005W	STV1	P37296	890 aa		10.14	□□□□□ -0.79
RCR1	YBR005W	APE3	P37302	537 aa	Known RBP	10.14	□□□□□ -0.79
RCR1	YBR005W	ITC1	P53125	1264 aa		10.14	□□□□□ -0.79
RCR1	YBR005W	FCP1	Q03254	732 aa		10.14	□□□□□ -0.79
RCR1	YBR005W	SRC1	Q03707	834 aa		10.14	□□□□□ -0.79
RCR1	YBR005W	MRP7	P12687	371 aa		10.13	□□□□□ -0.79
RCR1	YBR005W	MGM1	P32266	881 aa		10.13	□□□□□ -0.79
RCR1	YBR005W	SET1	P38827	1080 aa	Known RBP	10.13	□□□□□ -0.79
RCR1	YBR005W	NUG1	P40010	520 aa	Known RBP	10.13	□□□□□ -0.79
RCR1	YBR005W	RBA50	Q04418	439 aa		10.13	□□□□□ -0.79
RCR1	YBR005W	THI22	Q06490	572 aa		10.13	□□□□□ -0.79
RCR1	YBR005W	PSH1	Q12161	406 aa		10.13	□□□□□ -0.79
RCR1	YBR005W	NGR1	P32831	672 aa	Known RBP	10.12	□□□□□ -0.79
RCR1	YBR005W	GSM1	P42950	618 aa		10.12	□□□□□ -0.79
RCR1	YBR005W	MTC5	Q03897	1148 aa		10.12	□□□□□ -0.79
RCR1	YBR005W	YDR306C	Q06640	478 aa		10.12	□□□□□ -0.79
RCR1	YBR005W	THI3	Q07471	609 aa		10.12	□□□□□ -0.79
RCR1	YBR005W	MOT2	P34909	587 aa	Known RBP	10.11	□□□□□ -0.79
RCR1	YBR005W	NIT1	P40447	199 aa		10.11	□□□□□ -0.79
RCR1	YBR005W	JJJ2	P46997	583 aa		10.11	□□□□□ -0.79
RCR1	YBR005W	RTT109	Q07794	436 aa		10.11	□□□□□ -0.79
RCR1	YBR005W	SPL2	P38839	148 aa		10.1	□□□□□ -0.79
RCR1	YBR005W	AAD16	Q02895	342 aa		10.1	□□□□□ -0.79
RCR1	YBR005W	NOP8	Q08287	484 aa	Predicted RBP	10.1	□□□□□ -0.79
RCR1	YBR005W	PNT1	P38969	423 aa		10.09	□□□□□ -0.79
RCR1	YBR005W	MPP10	P47083	593 aa	Known RBP	10.09	□□□□□ -0.79
RCR1	YBR005W	SRT1	Q03175	343 aa		10.09	□□□□□ -0.79
RCR1	YBR005W	SNU66	Q12420	587 aa	Predicted RBP	10.09	□□□□□ -0.79
RCR1	YBR005W	ARG82	P07250	355 aa		10.07	□□□□□ -0.8
RCR1	YBR005W	TPD3	P31383	635 aa		10.07	□□□□□ -0.8
RCR1	YBR005W	IRC4	Q03036	179 aa		10.06	□□□□□ -0.8

Retrieved 100 of 5,963 RNA–protein pairs in 31.7 ms