RNA–Protein interactions for RNA: ENST00000641411.1

CASC19-227, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,285 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-227ENST00000641411 PRDM2Q13029 1718 aa12.28□□□□□ -0.44
CASC19-227ENST00000641411 HDGFP51858 240 aaKnown RBP12.27□□□□□ -0.45
CASC19-227ENST00000641411 LAPTM4AQ15012 233 aa12.27□□□□□ -0.45
CASC19-227ENST00000641411 NECTIN2Q92692 538 aa12.27□□□□□ -0.45
CASC19-227ENST00000641411 ARHGEF1Q92888 912 aaKnown RBP12.27□□□□□ -0.45
CASC19-227ENST00000641411 ZNF516Q92618 1163 aa12.26□□□□□ -0.45
CASC19-227ENST00000641411 EYA1Q99502 592 aa12.26□□□□□ -0.45
CASC19-227ENST00000641411 SWT1Q5T5J6 900 aaKnown RBP12.25□□□□□ -0.45
CASC19-227ENST00000641411 PPP1R18Q6NYC8 613 aa12.25□□□□□ -0.45
CASC19-227ENST00000641411 Q6ZNB5 142 aa12.25□□□□□ -0.45
CASC19-227ENST00000641411 LOC105371045A0A1W2PR82 267 aa12.24□□□□□ -0.45
CASC19-227ENST00000641411 CFTRP13569 1480 aa12.24□□□□□ -0.45
CASC19-227ENST00000641411 CC2D2AQ9P2K1 1620 aa12.24□□□□□ -0.45
CASC19-227ENST00000641411 SLF2Q8IX21 1173 aa12.23□□□□□ -0.45
CASC19-227ENST00000641411 TOP2BQ02880 1626 aa12.22□□□□□ -0.45
CASC19-227ENST00000641411 BIVM-ERCC5R4GMW8 1640 aa12.22□□□□□ -0.45
CASC19-227ENST00000641411 LCE2BO14633 110 aa12.22□□□□□ -0.45
CASC19-227ENST00000641411 RNF40O75150 1001 aa12.22□□□□□ -0.45
CASC19-227ENST00000641411 MLLT3P42568 568 aaPredicted RBP12.22□□□□□ -0.45
CASC19-227ENST00000641411 V9GY48 417 aaPredicted RBP12.22□□□□□ -0.45
CASC19-227ENST00000641411 SYNJ1O43426 1573 aa12.22□□□□□ -0.45
CASC19-227ENST00000641411 KCNV2Q8TDN2 545 aa12.21□□□□□ -0.45
CASC19-227ENST00000641411 PRKD2Q9BZL6 878 aa12.21□□□□□ -0.45
CASC19-227ENST00000641411 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.2□□□□□ -0.46
CASC19-227ENST00000641411 PTGDRQ13258 359 aa12.18□□□□□ -0.46
CASC19-227ENST00000641411 TSHZ2Q9NRE2 1034 aa12.18□□□□□ -0.46
CASC19-227ENST00000641411 GFRA3O60609 400 aa12.16□□□□□ -0.46
CASC19-227ENST00000641411 SLC4A3P48751 1232 aa12.16□□□□□ -0.46
CASC19-227ENST00000641411 NKX2-3Q8TAU0 364 aa12.16□□□□□ -0.46
CASC19-227ENST00000641411 NRG2O14511 850 aaPredicted RBP12.14□□□□□ -0.47
CASC19-227ENST00000641411 PRR14Q9BWN1 585 aa12.14□□□□□ -0.47
CASC19-227ENST00000641411 KIF21BO75037 1637 aa12.13□□□□□ -0.47
CASC19-227ENST00000641411 ZPR1O75312 459 aa12.13□□□□□ -0.47
CASC19-227ENST00000641411 TMUB1Q9BVT8 246 aa12.13□□□□□ -0.47
CASC19-227ENST00000641411 SOGA1O94964 1423 aa12.12□□□□□ -0.47
CASC19-227ENST00000641411 DNAJB2P25686 324 aa12.12□□□□□ -0.47
CASC19-227ENST00000641411 COPS2P61201 443 aa12.12□□□□□ -0.47
CASC19-227ENST00000641411 ADGRG1Q9Y653 693 aa12.12□□□□□ -0.47
CASC19-227ENST00000641411 CADPSQ9ULU8 1353 aa12.12□□□□□ -0.47
CASC19-227ENST00000641411 FAM9AQ8IZU1 332 aaPredicted RBP12.11□□□□□ -0.47
CASC19-227ENST00000641411 TMEM134Q9H6X4 195 aa12.11□□□□□ -0.47
CASC19-227ENST00000641411 TRAF7Q6Q0C0 670 aa12.1□□□□□ -0.47
CASC19-227ENST00000641411 TNIKQ9UKE5 1360 aa12.09□□□□□ -0.47
CASC19-227ENST00000641411 GGCXP38435 758 aa12.09□□□□□ -0.47
CASC19-227ENST00000641411 GOLGA3Q08378 1498 aa12.08□□□□□ -0.47
CASC19-227ENST00000641411 CUX1P39880 1505 aa12.08□□□□□ -0.48
CASC19-227ENST00000641411 RBM46Q8TBY0 533 aaKnown RBP12.08□□□□□ -0.48
CASC19-227ENST00000641411 PCDHB3Q9Y5E6 796 aa12.08□□□□□ -0.48
CASC19-227ENST00000641411 CEP164Q9UPV0 1460 aa12.08□□□□□ -0.48
CASC19-227ENST00000641411 BLOC1S3Q6QNY0 202 aa12.06□□□□□ -0.48
CASC19-227ENST00000641411 RUSC2Q8N2Y8 1516 aa12.05□□□□□ -0.48
CASC19-227ENST00000641411 RCCD1A6NED2 376 aa12.04□□□□□ -0.48
CASC19-227ENST00000641411 P3H3Q8IVL6 736 aa12.04□□□□□ -0.48
CASC19-227ENST00000641411 LAMC3Q9Y6N6 1575 aa12.04□□□□□ -0.48
CASC19-227ENST00000641411 ACTN4O43707 911 aaKnown RBP12.03□□□□□ -0.48
CASC19-227ENST00000641411 ERICH3Q5RHP9 1530 aa12.02□□□□□ -0.48
CASC19-227ENST00000641411 EMID1Q96A84 441 aaPredicted RBP12.02□□□□□ -0.49
CASC19-227ENST00000641411 RNF223E7ERA6 249 aa12.01□□□□□ -0.49
CASC19-227ENST00000641411 PDZRN3Q9UPQ7 1066 aa12.01□□□□□ -0.49
CASC19-227ENST00000641411 NUTM2FA1L443 756 aa12□□□□□ -0.49
CASC19-227ENST00000641411 FCHSD2O94868 740 aa12□□□□□ -0.49
CASC19-227ENST00000641411 FAM161AQ3B820 660 aa12□□□□□ -0.49
CASC19-227ENST00000641411 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.99□□□□□ -0.49
CASC19-227ENST00000641411 TLL1O43897 1013 aa11.99□□□□□ -0.49
CASC19-227ENST00000641411 KMT5BQ4FZB7 885 aa11.99□□□□□ -0.49
CASC19-227ENST00000641411 TRIM67Q6ZTA4 783 aa11.99□□□□□ -0.49
CASC19-227ENST00000641411 CEP162Q5TB80 1403 aa11.99□□□□□ -0.49
CASC19-227ENST00000641411 FANCD2Q9BXW9 1451 aa11.98□□□□□ -0.49
CASC19-227ENST00000641411 SEMA3EO15041 775 aa11.98□□□□□ -0.49
CASC19-227ENST00000641411 CFHP08603 1231 aa11.98□□□□□ -0.49
CASC19-227ENST00000641411 SLC10A3P09131 477 aa11.98□□□□□ -0.49
CASC19-227ENST00000641411 TRIM26Q12899 539 aaPredicted RBP11.98□□□□□ -0.49
CASC19-227ENST00000641411 KIF27Q86VH2 1401 aa11.97□□□□□ -0.49
CASC19-227ENST00000641411 ANKLE1Q8NAG6 615 aa11.97□□□□□ -0.49
CASC19-227ENST00000641411 PXYLP1Q8TE99 480 aa11.97□□□□□ -0.49
CASC19-227ENST00000641411 DNMBPQ6XZF7 1577 aa11.96□□□□□ -0.49
CASC19-227ENST00000641411 PRXQ9BXM0 1461 aa11.96□□□□□ -0.49
CASC19-227ENST00000641411 OATP04181 439 aa11.94□□□□□ -0.5
CASC19-227ENST00000641411 SLC19A1P41440 591 aa11.94□□□□□ -0.5
CASC19-227ENST00000641411 HIC1Q14526 733 aa11.92□□□□□ -0.5
CASC19-227ENST00000641411 SPRYD7Q5W111 196 aa11.92□□□□□ -0.5
CASC19-227ENST00000641411 TESPA1A2RU30 521 aaPredicted RBP11.91□□□□□ -0.5
CASC19-227ENST00000641411 S1PR4O95977 384 aa11.91□□□□□ -0.5
CASC19-227ENST00000641411 ADH1BP00325 375 aa11.91□□□□□ -0.5
CASC19-227ENST00000641411 PRR20EP86478 221 aa11.91□□□□□ -0.5
CASC19-227ENST00000641411 PRR20CP86479 221 aa11.91□□□□□ -0.5
CASC19-227ENST00000641411 PRR20DP86480 221 aa11.91□□□□□ -0.5
CASC19-227ENST00000641411 PRR20BP86481 221 aa11.91□□□□□ -0.5
CASC19-227ENST00000641411 PRR20AP86496 221 aa11.91□□□□□ -0.5
CASC19-227ENST00000641411 METTL3Q86U44 580 aaKnown RBP11.91□□□□□ -0.5
CASC19-227ENST00000641411 FGD5Q6ZNL6 1462 aa11.9□□□□□ -0.5
CASC19-227ENST00000641411 RAPGEF2Q9Y4G8 1499 aa11.9□□□□□ -0.5
CASC19-227ENST00000641411 ZNF598Q86UK7 904 aaKnown RBP11.9□□□□□ -0.5
CASC19-227ENST00000641411 PCGF6Q9BYE7 350 aa11.9□□□□□ -0.5
CASC19-227ENST00000641411 NR1I2O75469 434 aa11.89□□□□□ -0.51
CASC19-227ENST00000641411 TOPBP1Q92547 1522 aa11.89□□□□□ -0.51
CASC19-227ENST00000641411 PDS5BQ9NTI5 1447 aa11.88□□□□□ -0.51
CASC19-227ENST00000641411 GPR37O15354 613 aa11.88□□□□□ -0.51
CASC19-227ENST00000641411 ABCA10Q8WWZ4 1543 aa11.87□□□□□ -0.51
CASC19-227ENST00000641411 PPEF1O14829 653 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms