RNA–Protein interactions for RNA: ENST00000640421.1

SPIN3-238, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,872 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-238ENST00000640421 CEP170BQ9Y4F5 1589 aaPredicted RBP25.43■■□□□ 1.66
SPIN3-238ENST00000640421 MYOM2P54296 1465 aa25.42■■□□□ 1.66
SPIN3-238ENST00000640421 RPGRIP1LQ68CZ1 1315 aa25.41■■□□□ 1.66
SPIN3-238ENST00000640421 NUTM2DQ5VT03 806 aaPredicted RBP25.4■■□□□ 1.66
SPIN3-238ENST00000640421 ZNF142P52746 1687 aaPredicted RBP25.4■■□□□ 1.66
SPIN3-238ENST00000640421 ADGRF5Q8IZF2 1346 aa25.4■■□□□ 1.66
SPIN3-238ENST00000640421 NRXN1Q9ULB1 1477 aa25.39■■□□□ 1.65
SPIN3-238ENST00000640421 ZFYVE9O95405 1425 aa25.38■■□□□ 1.65
SPIN3-238ENST00000640421 RIMS2Q9UQ26 1411 aa25.37■■□□□ 1.65
SPIN3-238ENST00000640421 TRPM1Q7Z4N2 1603 aa25.36■■□□□ 1.65
SPIN3-238ENST00000640421 STAC3Q96MF2 364 aa25.36■■□□□ 1.65
SPIN3-238ENST00000640421 TMEM2Q9UHN6 1383 aa25.35■■□□□ 1.65
SPIN3-238ENST00000640421 RALGAPBQ86X10 1494 aa25.33■■□□□ 1.65
SPIN3-238ENST00000640421 PIK3C2GO75747 1445 aa25.33■■□□□ 1.65
SPIN3-238ENST00000640421 SLIT1O75093 1534 aa25.32■■□□□ 1.64
SPIN3-238ENST00000640421 ARHGAP23Q9P227 1491 aa25.32■■□□□ 1.64
SPIN3-238ENST00000640421 VGFO15240 615 aaPredicted RBP25.31■■□□□ 1.64
SPIN3-238ENST00000640421 NBPF1Q3BBV0 1214 aa25.29■■□□□ 1.64
SPIN3-238ENST00000640421 THEMISQ8N1K5 641 aaPredicted RBP25.29■■□□□ 1.64
SPIN3-238ENST00000640421 SENP3Q9H4L4 574 aaPredicted RBP25.28■■□□□ 1.64
SPIN3-238ENST00000640421 LTKP29376 864 aa25.28■■□□□ 1.64
SPIN3-238ENST00000640421 KIAA1210Q9ULL0 1709 aa25.26■■□□□ 1.63
SPIN3-238ENST00000640421 CFAP70Q5T0N1 1121 aa25.26■■□□□ 1.63
SPIN3-238ENST00000640421 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.24■■□□□ 1.63
SPIN3-238ENST00000640421 ROCK2O75116 1388 aaKnown RBP25.24■■□□□ 1.63
SPIN3-238ENST00000640421 NRXN3Q9Y4C0 1643 aa25.23■■□□□ 1.63
SPIN3-238ENST00000640421 GPRASP1Q5JY77 1395 aa25.23■■□□□ 1.63
SPIN3-238ENST00000640421 TXNDC2Q86VQ3 553 aa25.21■■□□□ 1.63
SPIN3-238ENST00000640421 C14orf93Q9H972 538 aaKnown RBP25.21■■□□□ 1.63
SPIN3-238ENST00000640421 IQGAP1P46940 1657 aa25.2■■□□□ 1.63
SPIN3-238ENST00000640421 SCAF11Q99590 1463 aaKnown RBP25.2■■□□□ 1.62
SPIN3-238ENST00000640421 CARD11Q9BXL7 1154 aa25.19■■□□□ 1.62
SPIN3-238ENST00000640421 SETBP1Q9Y6X0 1596 aa25.19■■□□□ 1.62
SPIN3-238ENST00000640421 ALKQ9UM73 1620 aa25.19■■□□□ 1.62
SPIN3-238ENST00000640421 HDGFP51858 240 aaKnown RBP25.19■■□□□ 1.62
SPIN3-238ENST00000640421 LMTK3Q96Q04 1460 aa25.19■■□□□ 1.62
SPIN3-238ENST00000640421 ADGRB1O14514 1584 aa25.18■■□□□ 1.62
SPIN3-238ENST00000640421 LAMC1P11047 1609 aa25.18■■□□□ 1.62
SPIN3-238ENST00000640421 SETD1AO15047 1707 aaKnown RBP25.18■■□□□ 1.62
SPIN3-238ENST00000640421 EID1Q9Y6B2 187 aa25.18■■□□□ 1.62
SPIN3-238ENST00000640421 ASXL1Q8IXJ9 1541 aa25.18■■□□□ 1.62
SPIN3-238ENST00000640421 PLEKHG1Q9ULL1 1385 aa25.17■■□□□ 1.62
SPIN3-238ENST00000640421 HIRIP3Q9BW71 556 aaPredicted RBP25.15■■□□□ 1.62
SPIN3-238ENST00000640421 TMEM132EQ6IEE7 984 aa25.14■■□□□ 1.61
SPIN3-238ENST00000640421 ADAMTS13Q76LX8 1427 aa25.13■■□□□ 1.61
SPIN3-238ENST00000640421 USP47Q96K76 1375 aa25.13■■□□□ 1.61
SPIN3-238ENST00000640421 HSPA5P11021 654 aaKnown RBP25.13■■□□□ 1.61
SPIN3-238ENST00000640421 HSPA2P54652 639 aa25.12■■□□□ 1.61
SPIN3-238ENST00000640421 ANKLE2Q86XL3 938 aa25.12■■□□□ 1.61
SPIN3-238ENST00000640421 POLR1AO95602 1720 aaPredicted RBP25.12■■□□□ 1.61
SPIN3-238ENST00000640421 EIF4G2P78344 907 aaKnown RBP eCLIP25.11■■□□□ 1.61
SPIN3-238ENST00000640421 MED14O60244 1454 aa25.09■■□□□ 1.61
SPIN3-238ENST00000640421 BCANQ96GW7 911 aa25.09■■□□□ 1.61
SPIN3-238ENST00000640421 METP08581 1390 aa25.08■■□□□ 1.6
SPIN3-238ENST00000640421 NCKAP5LQ9HCH0 1330 aa25.07■■□□□ 1.6
SPIN3-238ENST00000640421 SLC26A8Q96RN1 970 aa25.06■■□□□ 1.6
SPIN3-238ENST00000640421 ZNF316A6NFI3 1004 aaPredicted RBP25.04■■□□□ 1.6
SPIN3-238ENST00000640421 ST20-MTHFSA0A0A6YYL1 179 aa25.03■■□□□ 1.6
SPIN3-238ENST00000640421 YTHDC2Q9H6S0 1430 aaKnown RBP25.03■■□□□ 1.6
SPIN3-238ENST00000640421 NPHP4O75161 1426 aaPredicted RBP25.02■■□□□ 1.6
SPIN3-238ENST00000640421 DIP2AQ14689 1571 aa25.02■■□□□ 1.6
SPIN3-238ENST00000640421 TRAK1Q9UPV9 953 aa25.02■■□□□ 1.6
SPIN3-238ENST00000640421 ARHGEF28Q8N1W1 1705 aaKnown RBP25■■□□□ 1.59
SPIN3-238ENST00000640421 STRCQ7RTU9 1775 aa25■■□□□ 1.59
SPIN3-238ENST00000640421 STK26Q9P289 416 aa25■■□□□ 1.59
SPIN3-238ENST00000640421 TBX22Q9Y458 520 aa25■■□□□ 1.59
SPIN3-238ENST00000640421 PTPRUQ92729 1446 aa24.98■■□□□ 1.59
SPIN3-238ENST00000640421 LRPPRCP42704 1394 aaKnown RBP24.98■■□□□ 1.59
SPIN3-238ENST00000640421 TESK2Q96S53 571 aa24.96■■□□□ 1.59
SPIN3-238ENST00000640421 EIF3AQ14152 1382 aaKnown RBP24.95■■□□□ 1.58
SPIN3-238ENST00000640421 KNDC1Q76NI1 1749 aa24.94■■□□□ 1.58
SPIN3-238ENST00000640421 ABCC11Q96J66 1382 aa24.94■■□□□ 1.58
SPIN3-238ENST00000640421 C11orf95C9JLR9 678 aaPredicted RBP24.94■■□□□ 1.58
SPIN3-238ENST00000640421 TECPR2O15040 1411 aa24.93■■□□□ 1.58
SPIN3-238ENST00000640421 DLC1Q96QB1 1528 aa24.92■■□□□ 1.58
SPIN3-238ENST00000640421 QRICH2Q9H0J4 1663 aa24.91■■□□□ 1.58
SPIN3-238ENST00000640421 CPS1P31327 1500 aa24.91■■□□□ 1.58
SPIN3-238ENST00000640421 XRN1Q8IZH2 1706 aaKnown RBP24.9■■□□□ 1.58
SPIN3-238ENST00000640421 CENPJQ9HC77 1338 aaPredicted RBP24.9■■□□□ 1.58
SPIN3-238ENST00000640421 CHD2O14647 1828 aaKnown RBP24.89■■□□□ 1.58
SPIN3-238ENST00000640421 PIK3R4Q99570 1358 aa24.89■■□□□ 1.57
SPIN3-238ENST00000640421 ROBO2Q9HCK4 1378 aa24.88■■□□□ 1.57
SPIN3-238ENST00000640421 PLEKHH1Q9ULM0 1364 aa24.88■■□□□ 1.57
SPIN3-238ENST00000640421 PRAM1Q96QH2 718 aa24.88■■□□□ 1.57
SPIN3-238ENST00000640421 AMOTL2Q9Y2J4 779 aa24.88■■□□□ 1.57
SPIN3-238ENST00000640421 SAFB2Q14151 953 aaKnown RBP eCLIP24.87■■□□□ 1.57
SPIN3-238ENST00000640421 WASHC2AQ641Q2 1341 aa24.86■■□□□ 1.57
SPIN3-238ENST00000640421 DISP3Q9P2K9 1392 aa24.86■■□□□ 1.57
SPIN3-238ENST00000640421 WAPLQ7Z5K2 1190 aa24.86■■□□□ 1.57
SPIN3-238ENST00000640421 SBNO2Q9Y2G9 1366 aa24.84■■□□□ 1.57
SPIN3-238ENST00000640421 FAM135BQ49AJ0 1406 aa24.84■■□□□ 1.57
SPIN3-238ENST00000640421 KCNA6P17658 529 aa24.83■■□□□ 1.57
SPIN3-238ENST00000640421 KIF7Q2M1P5 1343 aa24.83■■□□□ 1.57
SPIN3-238ENST00000640421 PTCH1Q13635 1447 aa24.82■■□□□ 1.56
SPIN3-238ENST00000640421 POGKQ9P215 609 aa24.82■■□□□ 1.56
SPIN3-238ENST00000640421 CCDC7Q96M83 1385 aa24.82■■□□□ 1.56
SPIN3-238ENST00000640421 NWD1Q149M9 1564 aa24.81■■□□□ 1.56
SPIN3-238ENST00000640421 SIRT1Q96EB6 747 aa24.81■■□□□ 1.56
SPIN3-238ENST00000640421 STRCP1A6NGW2 1772 aa24.79■■□□□ 1.56
SPIN3-238ENST00000640421 TULP4Q9NRJ4 1543 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms