RNA–Protein interactions for RNA: ENST00000640219.1

HLA-C-210, Transcript of major histocompatibility complex, class I, C, humanhuman

BASIC

Gene HLA-C, Length 976 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-210ENST00000640219 RRP7BPQ9NSQ0 103 aa21.6■■□□□ 1.05
HLA-C-210ENST00000640219 MYOM3Q5VTT5 1437 aa21.6■■□□□ 1.05
HLA-C-210ENST00000640219 C14orf37Q86TY3 774 aa21.58■■□□□ 1.05
HLA-C-210ENST00000640219 SHPRHQ149N8 1683 aa21.57■■□□□ 1.04
HLA-C-210ENST00000640219 ADGRB3O60242 1522 aa21.57■■□□□ 1.04
HLA-C-210ENST00000640219 NUTM2BA6NNL0 878 aaPredicted RBP21.57■■□□□ 1.04
HLA-C-210ENST00000640219 NUTM2EB1AL46 878 aaPredicted RBP21.57■■□□□ 1.04
HLA-C-210ENST00000640219 NUTM2AQ8IVF1 878 aaPredicted RBP21.57■■□□□ 1.04
HLA-C-210ENST00000640219 NCOA3Q9Y6Q9 1424 aa21.56■■□□□ 1.04
HLA-C-210ENST00000640219 AHDC1Q5TGY3 1603 aaPredicted RBP21.55■■□□□ 1.04
HLA-C-210ENST00000640219 CHD2O14647 1828 aaKnown RBP21.55■■□□□ 1.04
HLA-C-210ENST00000640219 CADPS2Q86UW7 1296 aa21.54■■□□□ 1.04
HLA-C-210ENST00000640219 SLC52A1Q9NWF4 448 aa21.54■■□□□ 1.04
HLA-C-210ENST00000640219 LMTK2Q8IWU2 1503 aa21.54■■□□□ 1.04
HLA-C-210ENST00000640219 NOS1P29475 1434 aa21.54■■□□□ 1.04
HLA-C-210ENST00000640219 VPS8Q8N3P4 1428 aa21.54■■□□□ 1.04
HLA-C-210ENST00000640219 AFF2P51816 1311 aa21.54■■□□□ 1.04
HLA-C-210ENST00000640219 PLEKHG1Q9ULL1 1385 aa21.53■■□□□ 1.04
HLA-C-210ENST00000640219 ATF3P18847 181 aa21.53■■□□□ 1.04
HLA-C-210ENST00000640219 SRCAPQ6ZRS2 3230 aa21.52■■□□□ 1.04
HLA-C-210ENST00000640219 PPP1R15AO75807 674 aaPredicted RBP21.52■■□□□ 1.04
HLA-C-210ENST00000640219 C19orf44Q9H6X5 657 aa21.51■■□□□ 1.03
HLA-C-210ENST00000640219 HDGFP51858 240 aaKnown RBP21.5■■□□□ 1.03
HLA-C-210ENST00000640219 TBX22Q9Y458 520 aa21.5■■□□□ 1.03
HLA-C-210ENST00000640219 ABCC5O15440 1437 aa21.49■■□□□ 1.03
HLA-C-210ENST00000640219 ZFYVE9O95405 1425 aa21.49■■□□□ 1.03
HLA-C-210ENST00000640219 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.48■■□□□ 1.03
HLA-C-210ENST00000640219 RIMS2Q9UQ26 1411 aa21.47■■□□□ 1.03
HLA-C-210ENST00000640219 KANK4Q5T7N3 995 aaPredicted RBP21.47■■□□□ 1.03
HLA-C-210ENST00000640219 NUTM2DQ5VT03 806 aaPredicted RBP21.47■■□□□ 1.03
HLA-C-210ENST00000640219 BRINP3Q76B58 766 aa21.47■■□□□ 1.03
HLA-C-210ENST00000640219 DIP2AQ14689 1571 aa21.47■■□□□ 1.03
HLA-C-210ENST00000640219 RGS12O14924 1447 aa21.46■■□□□ 1.03
HLA-C-210ENST00000640219 RBM6P78332 1123 aaKnown RBP21.46■■□□□ 1.03
HLA-C-210ENST00000640219 QTRT2Q9H974 415 aaKnown RBP21.46■■□□□ 1.03
HLA-C-210ENST00000640219 CROCC2H7BZ55 1655 aa21.45■■□□□ 1.02
HLA-C-210ENST00000640219 C8orf37Q96NL8 207 aa21.43■■□□□ 1.02
HLA-C-210ENST00000640219 DAPK1P53355 1430 aa21.41■■□□□ 1.02
HLA-C-210ENST00000640219 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.41■■□□□ 1.02
HLA-C-210ENST00000640219 SETD5Q9C0A6 1442 aa21.4■■□□□ 1.02
HLA-C-210ENST00000640219 CHIC2Q9UKJ5 165 aa21.4■■□□□ 1.02
HLA-C-210ENST00000640219 MYO5BQ9ULV0 1848 aa21.4■■□□□ 1.02
HLA-C-210ENST00000640219 PIK3R4Q99570 1358 aa21.39■■□□□ 1.02
HLA-C-210ENST00000640219 ANKRD30AQ9BXX3 1397 aa21.39■■□□□ 1.02
HLA-C-210ENST00000640219 ZRANB1Q9UGI0 708 aa21.39■■□□□ 1.01
HLA-C-210ENST00000640219 ADAMTS13Q76LX8 1427 aa21.38■■□□□ 1.01
HLA-C-210ENST00000640219 FOXD1Q16676 465 aa21.38■■□□□ 1.01
HLA-C-210ENST00000640219 LRRC59Q96AG4 307 aaKnown RBP21.38■■□□□ 1.01
HLA-C-210ENST00000640219 GCC2Q8IWJ2 1684 aa21.37■■□□□ 1.01
HLA-C-210ENST00000640219 CHGAP10645 457 aaKnown RBP21.37■■□□□ 1.01
HLA-C-210ENST00000640219 ASXL1Q8IXJ9 1541 aa21.37■■□□□ 1.01
HLA-C-210ENST00000640219 RPRD2Q5VT52 1461 aaKnown RBP21.37■■□□□ 1.01
HLA-C-210ENST00000640219 TMEM131LA2VDJ0 1609 aa21.37■■□□□ 1.01
HLA-C-210ENST00000640219 PTPN23Q9H3S7 1636 aa21.37■■□□□ 1.01
HLA-C-210ENST00000640219 ATAD2Q6PL18 1390 aa21.36■■□□□ 1.01
HLA-C-210ENST00000640219 NGLY1Q96IV0 654 aa21.36■■□□□ 1.01
HLA-C-210ENST00000640219 AMOTL2Q9Y2J4 779 aa21.36■■□□□ 1.01
HLA-C-210ENST00000640219 DCCP43146 1447 aa21.34■■□□□ 1.01
HLA-C-210ENST00000640219 PNPLA6Q8IY17 1366 aa21.32■■□□□ 1
HLA-C-210ENST00000640219 NHSL1Q5SYE7 1610 aa21.31■■□□□ 1
HLA-C-210ENST00000640219 MST1RQ04912 1400 aa21.3■■□□□ 1
HLA-C-210ENST00000640219 PTPRUQ92729 1446 aa21.3■■□□□ 1
HLA-C-210ENST00000640219 TRPM2O94759 1503 aa21.3■■□□□ 1
HLA-C-210ENST00000640219 ADAMTS2O95450 1211 aa21.3■■□□□ 1
HLA-C-210ENST00000640219 SETBP1Q9Y6X0 1596 aa21.29■■□□□ 1
HLA-C-210ENST00000640219 DDX17Q92841 729 aaKnown RBP21.29■■□□□ 1
HLA-C-210ENST00000640219 USP21Q9UK80 565 aa21.25■□□□□ 0.99
HLA-C-210ENST00000640219 TRPC5Q9UL62 973 aaPredicted RBP21.24■□□□□ 0.99
HLA-C-210ENST00000640219 ANKRD50Q9ULJ7 1429 aa21.22■□□□□ 0.99
HLA-C-210ENST00000640219 CCDC125Q86Z20 511 aa21.22■□□□□ 0.99
HLA-C-210ENST00000640219 ADGRL2O95490 1459 aa21.21■□□□□ 0.99
HLA-C-210ENST00000640219 UNC13BO14795 1591 aa21.2■□□□□ 0.98
HLA-C-210ENST00000640219 XRN1Q8IZH2 1706 aaKnown RBP21.19■□□□□ 0.98
HLA-C-210ENST00000640219 FNBP4Q8N3X1 1017 aaPredicted RBP21.18■□□□□ 0.98
HLA-C-210ENST00000640219 APLP2Q06481 763 aa21.17■□□□□ 0.98
HLA-C-210ENST00000640219 ATRNO75882 1429 aa21.17■□□□□ 0.98
HLA-C-210ENST00000640219 ADGRL3Q9HAR2 1447 aa21.17■□□□□ 0.98
HLA-C-210ENST00000640219 PTCH1Q13635 1447 aa21.15■□□□□ 0.98
HLA-C-210ENST00000640219 EP400Q96L91 3159 aa21.14■□□□□ 0.98
HLA-C-210ENST00000640219 METP08581 1390 aa21.13■□□□□ 0.97
HLA-C-210ENST00000640219 E9PCH4 1651 aa21.13■□□□□ 0.97
HLA-C-210ENST00000640219 C1orf167Q5SNV9 1468 aa21.13■□□□□ 0.97
HLA-C-210ENST00000640219 NRXN3Q9Y4C0 1643 aa21.12■□□□□ 0.97
HLA-C-210ENST00000640219 SOS2Q07890 1332 aaPredicted RBP21.12■□□□□ 0.97
HLA-C-210ENST00000640219 PPARGC1BQ86YN6 1023 aaKnown RBP21.11■□□□□ 0.97
HLA-C-210ENST00000640219 NALCNQ8IZF0 1738 aa21.09■□□□□ 0.97
HLA-C-210ENST00000640219 LAMC1P11047 1609 aa21.09■□□□□ 0.97
HLA-C-210ENST00000640219 FAM50AQ14320 339 aaKnown RBP21.09■□□□□ 0.97
HLA-C-210ENST00000640219 ORAI2Q96SN7 254 aa21.09■□□□□ 0.97
HLA-C-210ENST00000640219 ZNF326Q5BKZ1 582 aaKnown RBP21.06■□□□□ 0.96
HLA-C-210ENST00000640219 GJD4Q96KN9 370 aaPredicted RBP21.06■□□□□ 0.96
HLA-C-210ENST00000640219 BCL9LQ86UU0 1499 aa21.06■□□□□ 0.96
HLA-C-210ENST00000640219 BLMP54132 1417 aaPredicted RBP21.04■□□□□ 0.96
HLA-C-210ENST00000640219 COL22A1Q8NFW1 1626 aaPredicted RBP21.04■□□□□ 0.96
HLA-C-210ENST00000640219 DEFB132Q7Z7B7 95 aa21.03■□□□□ 0.96
HLA-C-210ENST00000640219 IQGAP3Q86VI3 1631 aa21.02■□□□□ 0.96
HLA-C-210ENST00000640219 MYOM2P54296 1465 aa21.01■□□□□ 0.95
HLA-C-210ENST00000640219 SF3B2Q13435 895 aaKnown RBP21■□□□□ 0.95
HLA-C-210ENST00000640219 LRP5O75197 1615 aa21■□□□□ 0.95
HLA-C-210ENST00000640219 NUP155O75694 1391 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms