RNA–Protein interactions for RNA: ENST00000639956.1

SPIN3-232, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,998 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-232ENST00000639956 SCAPERQ9BY12 1400 aa16.31■□□□□ 0.2
SPIN3-232ENST00000639956 RTN4Q9NQC3 1192 aaKnown RBP16.31■□□□□ 0.2
SPIN3-232ENST00000639956 WDR7Q9Y4E6 1490 aa16.31■□□□□ 0.2
SPIN3-232ENST00000639956 BLMP54132 1417 aaPredicted RBP16.31■□□□□ 0.2
SPIN3-232ENST00000639956 GGT6Q6P531 493 aa16.31■□□□□ 0.2
SPIN3-232ENST00000639956 CARD14Q9BXL6 1004 aa16.31■□□□□ 0.2
SPIN3-232ENST00000639956 FRAT1Q92837 279 aaPredicted RBP16.3■□□□□ 0.2
SPIN3-232ENST00000639956 DUOX2Q9NRD8 1548 aa16.3■□□□□ 0.2
SPIN3-232ENST00000639956 CDCA8Q53HL2 280 aa16.29■□□□□ 0.2
SPIN3-232ENST00000639956 BCL2L13Q9BXK5 485 aa16.29■□□□□ 0.2
SPIN3-232ENST00000639956 MYO5CQ9NQX4 1742 aa16.29■□□□□ 0.2
SPIN3-232ENST00000639956 CANXP27824 592 aaKnown RBP16.29■□□□□ 0.2
SPIN3-232ENST00000639956 SLC12A5Q9H2X9 1139 aa16.28■□□□□ 0.2
SPIN3-232ENST00000639956 UNC13BO14795 1591 aa16.27■□□□□ 0.2
SPIN3-232ENST00000639956 UGGT1Q9NYU2 1555 aa16.27■□□□□ 0.2
SPIN3-232ENST00000639956 ABCC2Q92887 1545 aa16.27■□□□□ 0.2
SPIN3-232ENST00000639956 SLFN5Q08AF3 891 aa16.27■□□□□ 0.2
SPIN3-232ENST00000639956 MS4A1P11836 297 aa16.26■□□□□ 0.19
SPIN3-232ENST00000639956 DAXXQ9UER7 740 aaPredicted RBP16.26■□□□□ 0.19
SPIN3-232ENST00000639956 PANK1Q8TE04 598 aa16.26■□□□□ 0.19
SPIN3-232ENST00000639956 COG6Q9Y2V7 657 aa16.26■□□□□ 0.19
SPIN3-232ENST00000639956 IQGAP3Q86VI3 1631 aa16.26■□□□□ 0.19
SPIN3-232ENST00000639956 MAST1Q9Y2H9 1570 aa16.25■□□□□ 0.19
SPIN3-232ENST00000639956 ATP10AO60312 1499 aa16.25■□□□□ 0.19
SPIN3-232ENST00000639956 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.24■□□□□ 0.19
SPIN3-232ENST00000639956 ZMYM4Q5VZL5 1548 aa16.24■□□□□ 0.19
SPIN3-232ENST00000639956 CLUAP1Q96AJ1 413 aa16.23■□□□□ 0.19
SPIN3-232ENST00000639956 TNNQ9UQP3 1299 aa16.23■□□□□ 0.19
SPIN3-232ENST00000639956 SCAF11Q99590 1463 aaKnown RBP16.23■□□□□ 0.19
SPIN3-232ENST00000639956 KANK1Q14678 1352 aa16.23■□□□□ 0.19
SPIN3-232ENST00000639956 MORC1Q86VD1 984 aa16.23■□□□□ 0.19
SPIN3-232ENST00000639956 IGHDP01880 384 aa16.22■□□□□ 0.19
SPIN3-232ENST00000639956 CENPQQ7L2Z9 268 aaPredicted RBP16.22■□□□□ 0.19
SPIN3-232ENST00000639956 KDM2BQ8NHM5 1336 aa16.22■□□□□ 0.19
SPIN3-232ENST00000639956 ZNF521Q96K83 1311 aa16.22■□□□□ 0.19
SPIN3-232ENST00000639956 IL27Q8NEV9 243 aa16.21■□□□□ 0.19
SPIN3-232ENST00000639956 CFAP65Q6ZU64 1925 aaKnown RBP16.2■□□□□ 0.18
SPIN3-232ENST00000639956 EIF2AK4Q9P2K8 1649 aaKnown RBP16.2■□□□□ 0.18
SPIN3-232ENST00000639956 PLXNC1O60486 1568 aa16.19■□□□□ 0.18
SPIN3-232ENST00000639956 STK26Q9P289 416 aa16.19■□□□□ 0.18
SPIN3-232ENST00000639956 ASXL1Q8IXJ9 1541 aa16.19■□□□□ 0.18
SPIN3-232ENST00000639956 C8orf34Q49A92 452 aa16.18■□□□□ 0.18
SPIN3-232ENST00000639956 EIF3AQ14152 1382 aaKnown RBP16.18■□□□□ 0.18
SPIN3-232ENST00000639956 ABCC1P33527 1531 aa16.18■□□□□ 0.18
SPIN3-232ENST00000639956 ZCCHC11Q5TAX3 1644 aaKnown RBP16.18■□□□□ 0.18
SPIN3-232ENST00000639956 FAM161AQ3B820 660 aa16.17■□□□□ 0.18
SPIN3-232ENST00000639956 CLTCL1P53675 1640 aa16.17■□□□□ 0.18
SPIN3-232ENST00000639956 MADDQ8WXG6 1647 aa16.17■□□□□ 0.18
SPIN3-232ENST00000639956 WWC1Q8IX03 1113 aa16.17■□□□□ 0.18
SPIN3-232ENST00000639956 FANCAO15360 1455 aa16.16■□□□□ 0.18
SPIN3-232ENST00000639956 CENPJQ9HC77 1338 aaPredicted RBP16.16■□□□□ 0.18
SPIN3-232ENST00000639956 E9PSI1 815 aa16.16■□□□□ 0.18
SPIN3-232ENST00000639956 MTHFSP49914 203 aa16.16■□□□□ 0.18
SPIN3-232ENST00000639956 TCP11L2Q8N4U5 519 aa16.15■□□□□ 0.18
SPIN3-232ENST00000639956 DDRGK1Q96HY6 314 aa16.14■□□□□ 0.17
SPIN3-232ENST00000639956 NOS1P29475 1434 aa16.14■□□□□ 0.17
SPIN3-232ENST00000639956 NFKBIBQ15653 356 aa16.14■□□□□ 0.17
SPIN3-232ENST00000639956 CABP2Q9NPB3 220 aa16.14■□□□□ 0.17
SPIN3-232ENST00000639956 SEC24BO95487 1268 aa16.14■□□□□ 0.17
SPIN3-232ENST00000639956 NSD3Q9BZ95 1437 aa16.13■□□□□ 0.17
SPIN3-232ENST00000639956 U2AF1L5P0DN76 240 aaPredicted RBP16.13■□□□□ 0.17
SPIN3-232ENST00000639956 U2AF1Q01081 240 aaKnown RBP eCLIP16.13■□□□□ 0.17
SPIN3-232ENST00000639956 ADGRL1O94910 1474 aa16.13■□□□□ 0.17
SPIN3-232ENST00000639956 PPM1GO15355 546 aaPredicted RBP16.12■□□□□ 0.17
SPIN3-232ENST00000639956 ERVK-7P63135 1459 aa16.12■□□□□ 0.17
SPIN3-232ENST00000639956 U2SURPO15042 1029 aaKnown RBP16.11■□□□□ 0.17
SPIN3-232ENST00000639956 NKTRP30414 1462 aaKnown RBP16.11■□□□□ 0.17
SPIN3-232ENST00000639956 RLBP1P12271 317 aa16.11■□□□□ 0.17
SPIN3-232ENST00000639956 TRMT2AQ8IZ69 625 aaKnown RBP16.11■□□□□ 0.17
SPIN3-232ENST00000639956 TRPM2O94759 1503 aa16.11■□□□□ 0.17
SPIN3-232ENST00000639956 ZFYVE16Q7Z3T8 1539 aa16.11■□□□□ 0.17
SPIN3-232ENST00000639956 PTPRTO14522 1441 aa16.11■□□□□ 0.17
SPIN3-232ENST00000639956 RAPGEF3O95398 923 aa16.11■□□□□ 0.17
SPIN3-232ENST00000639956 PIK3C2GO75747 1445 aa16.11■□□□□ 0.17
SPIN3-232ENST00000639956 LAMC1P11047 1609 aa16.1■□□□□ 0.17
SPIN3-232ENST00000639956 SPRYD3Q8NCJ5 442 aa16.1■□□□□ 0.17
SPIN3-232ENST00000639956 RNF17Q9BXT8 1623 aaKnown RBP16.09■□□□□ 0.17
SPIN3-232ENST00000639956 FRAT2O75474 233 aaPredicted RBP16.09■□□□□ 0.17
SPIN3-232ENST00000639956 TSR2Q969E8 191 aaKnown RBP16.09■□□□□ 0.17
SPIN3-232ENST00000639956 SLKQ9H2G2 1235 aaPredicted RBP16.09■□□□□ 0.17
SPIN3-232ENST00000639956 SHROOM2Q13796 1616 aa16.09■□□□□ 0.17
SPIN3-232ENST00000639956 GGNBP2Q9H3C7 697 aa16.08■□□□□ 0.16
SPIN3-232ENST00000639956 ATP7AQ04656 1500 aa16.08■□□□□ 0.16
SPIN3-232ENST00000639956 IQGAP1P46940 1657 aa16.08■□□□□ 0.16
SPIN3-232ENST00000639956 NPM1P06748 294 aaKnown RBP eCLIP16.07■□□□□ 0.16
SPIN3-232ENST00000639956 ARXQ96QS3 562 aa16.07■□□□□ 0.16
SPIN3-232ENST00000639956 FBLN1P23142 703 aa16.07■□□□□ 0.16
SPIN3-232ENST00000639956 BRPF3Q9ULD4 1205 aa16.07■□□□□ 0.16
SPIN3-232ENST00000639956 PCDHB15Q9Y5E8 787 aa16.07■□□□□ 0.16
SPIN3-232ENST00000639956 SYNMO15061 1565 aa16.07■□□□□ 0.16
SPIN3-232ENST00000639956 SPHKAPQ2M3C7 1700 aa16.06■□□□□ 0.16
SPIN3-232ENST00000639956 SRPK2P78362 688 aaKnown RBP16.06■□□□□ 0.16
SPIN3-232ENST00000639956 RUNDC1Q96C34 613 aa16.06■□□□□ 0.16
SPIN3-232ENST00000639956 RTEL1-TNFRSF6BF6WH68 1400 aa16.06■□□□□ 0.16
SPIN3-232ENST00000639956 INSRP06213 1382 aa16.06■□□□□ 0.16
SPIN3-232ENST00000639956 RARSP54136 660 aaKnown RBP16.05■□□□□ 0.16
SPIN3-232ENST00000639956 STAC3Q96MF2 364 aa16.05■□□□□ 0.16
SPIN3-232ENST00000639956 MINK1Q8N4C8 1332 aaPredicted RBP16.03■□□□□ 0.16
SPIN3-232ENST00000639956 ASXL2Q76L83 1435 aa16.03■□□□□ 0.16
SPIN3-232ENST00000639956 MYOM1P52179 1685 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms