RNA–Protein interactions for RNA: ENST00000639628.1

HNRNPU-219, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 1 (best) BASIC

Gene HNRNPU, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-219ENST00000639628 RTF1Q92541 710 aaKnown RBP10.82□□□□□ -0.68
HNRNPU-219ENST00000639628 ADAMTS12P58397 1594 aa10.82□□□□□ -0.68
HNRNPU-219ENST00000639628 PTMSP20962 102 aa10.82□□□□□ -0.68
HNRNPU-219ENST00000639628 GBP4Q96PP9 640 aa10.82□□□□□ -0.68
HNRNPU-219ENST00000639628 SLC4A3P48751 1232 aa10.81□□□□□ -0.68
HNRNPU-219ENST00000639628 SAMD9Q5K651 1589 aa10.81□□□□□ -0.68
HNRNPU-219ENST00000639628 GSE1Q14687 1217 aa10.8□□□□□ -0.68
HNRNPU-219ENST00000639628 BACH2Q9BYV9 841 aa10.8□□□□□ -0.68
HNRNPU-219ENST00000639628 DDX19BQ9UMR2 479 aa10.8□□□□□ -0.68
HNRNPU-219ENST00000639628 RALGAPBQ86X10 1494 aa10.8□□□□□ -0.68
HNRNPU-219ENST00000639628 DZIP1LQ8IYY4 767 aaKnown RBP10.8□□□□□ -0.68
HNRNPU-219ENST00000639628 KIAA0556O60303 1618 aa10.8□□□□□ -0.68
HNRNPU-219ENST00000639628 SOX12O15370 315 aa10.79□□□□□ -0.68
HNRNPU-219ENST00000639628 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.79□□□□□ -0.68
HNRNPU-219ENST00000639628 PDE3AQ14432 1141 aa10.79□□□□□ -0.68
HNRNPU-219ENST00000639628 ABCA5Q8WWZ7 1642 aa10.79□□□□□ -0.68
HNRNPU-219ENST00000639628 MCCP23508 829 aa10.79□□□□□ -0.68
HNRNPU-219ENST00000639628 MINK1Q8N4C8 1332 aaPredicted RBP10.79□□□□□ -0.68
HNRNPU-219ENST00000639628 DIAPH1O60610 1272 aaKnown RBP10.78□□□□□ -0.68
HNRNPU-219ENST00000639628 TCP11L2Q8N4U5 519 aa10.78□□□□□ -0.68
HNRNPU-219ENST00000639628 MTHFSP49914 203 aa10.77□□□□□ -0.69
HNRNPU-219ENST00000639628 MSH5O43196 834 aa10.77□□□□□ -0.69
HNRNPU-219ENST00000639628 PAK3O75914 559 aaPredicted RBP10.77□□□□□ -0.69
HNRNPU-219ENST00000639628 NINLQ9Y2I6 1382 aa10.77□□□□□ -0.69
HNRNPU-219ENST00000639628 DNMT1P26358 1616 aaKnown RBP10.77□□□□□ -0.69
HNRNPU-219ENST00000639628 PANK1Q8TE04 598 aa10.77□□□□□ -0.69
HNRNPU-219ENST00000639628 TMEM132EQ6IEE7 984 aa10.76□□□□□ -0.69
HNRNPU-219ENST00000639628 OSCARQ8IYS5 282 aa10.76□□□□□ -0.69
HNRNPU-219ENST00000639628 RIPK4P57078 832 aa10.76□□□□□ -0.69
HNRNPU-219ENST00000639628 GOLGA6L3A6NEY3 463 aa10.76□□□□□ -0.69
HNRNPU-219ENST00000639628 HMMRO75330 724 aa10.76□□□□□ -0.69
HNRNPU-219ENST00000639628 KIF16BQ96L93 1317 aa10.76□□□□□ -0.69
HNRNPU-219ENST00000639628 NAP1L5Q96NT1 182 aaPredicted RBP10.76□□□□□ -0.69
HNRNPU-219ENST00000639628 PTMAP06454 111 aaKnown RBP10.75□□□□□ -0.69
HNRNPU-219ENST00000639628 OS9Q13438 667 aaPredicted RBP10.75□□□□□ -0.69
HNRNPU-219ENST00000639628 ATP10BO94823 1461 aa10.75□□□□□ -0.69
HNRNPU-219ENST00000639628 APBB1O00213 710 aa10.75□□□□□ -0.69
HNRNPU-219ENST00000639628 GZF1Q9H116 711 aaPredicted RBP10.75□□□□□ -0.69
HNRNPU-219ENST00000639628 PLEKHG5O94827 1062 aa10.75□□□□□ -0.69
HNRNPU-219ENST00000639628 COG3Q96JB2 828 aa10.74□□□□□ -0.69
HNRNPU-219ENST00000639628 STK31Q9BXU1 1019 aa10.74□□□□□ -0.69
HNRNPU-219ENST00000639628 SLFN5Q08AF3 891 aa10.74□□□□□ -0.69
HNRNPU-219ENST00000639628 SHANK2Q9UPX8 1470 aa10.73□□□□□ -0.69
HNRNPU-219ENST00000639628 ARHGEF12Q9NZN5 1544 aa10.73□□□□□ -0.69
HNRNPU-219ENST00000639628 BCAR3O75815 825 aa10.73□□□□□ -0.69
HNRNPU-219ENST00000639628 NFKBIBQ15653 356 aa10.73□□□□□ -0.69
HNRNPU-219ENST00000639628 CHMP4AQ9BY43 222 aa10.73□□□□□ -0.69
HNRNPU-219ENST00000639628 CABP2Q9NPB3 220 aa10.73□□□□□ -0.69
HNRNPU-219ENST00000639628 SLC12A5Q9H2X9 1139 aa10.73□□□□□ -0.69
HNRNPU-219ENST00000639628 GCC2Q8IWJ2 1684 aa10.73□□□□□ -0.69
HNRNPU-219ENST00000639628 DDX11L8A8MPP1 907 aa10.73□□□□□ -0.69
HNRNPU-219ENST00000639628 ANKRD45Q5TZF3 282 aa10.73□□□□□ -0.69
HNRNPU-219ENST00000639628 GGNBP2Q9H3C7 697 aa10.73□□□□□ -0.69
HNRNPU-219ENST00000639628 PZPP20742 1482 aa10.73□□□□□ -0.69
HNRNPU-219ENST00000639628 RPGRIP1LQ68CZ1 1315 aa10.73□□□□□ -0.69
HNRNPU-219ENST00000639628 WDR63Q8IWG1 891 aa10.72□□□□□ -0.69
HNRNPU-219ENST00000639628 TEX14Q8IWB6 1497 aa10.72□□□□□ -0.69
HNRNPU-219ENST00000639628 ELL2O00472 640 aaPredicted RBP10.72□□□□□ -0.69
HNRNPU-219ENST00000639628 DISP3Q9P2K9 1392 aa10.71□□□□□ -0.69
HNRNPU-219ENST00000639628 PRAG1Q86YV5 1406 aa10.71□□□□□ -0.69
HNRNPU-219ENST00000639628 API5Q9BZZ5 524 aaKnown RBP10.71□□□□□ -0.69
HNRNPU-219ENST00000639628 SCAF11Q99590 1463 aaKnown RBP10.71□□□□□ -0.7
HNRNPU-219ENST00000639628 DISP1Q96F81 1524 aa10.71□□□□□ -0.7
HNRNPU-219ENST00000639628 PBRM1Q86U86 1689 aa10.71□□□□□ -0.7
HNRNPU-219ENST00000639628 ADGRL2O95490 1459 aa10.71□□□□□ -0.7
HNRNPU-219ENST00000639628 NUP160Q12769 1436 aa10.7□□□□□ -0.7
HNRNPU-219ENST00000639628 DHX29Q7Z478 1369 aaKnown RBP10.7□□□□□ -0.7
HNRNPU-219ENST00000639628 CT47B1P0C2W7 299 aaPredicted RBP10.7□□□□□ -0.7
HNRNPU-219ENST00000639628 GNAI1P63096 354 aa10.7□□□□□ -0.7
HNRNPU-219ENST00000639628 LMOD2Q6P5Q4 547 aa10.7□□□□□ -0.7
HNRNPU-219ENST00000639628 MAGI3Q5TCQ9 1506 aa10.7□□□□□ -0.7
HNRNPU-219ENST00000639628 PARD3Q8TEW0 1356 aa10.7□□□□□ -0.7
HNRNPU-219ENST00000639628 FAM135AQ9P2D6 1515 aa10.7□□□□□ -0.7
HNRNPU-219ENST00000639628 EID1Q9Y6B2 187 aa10.7□□□□□ -0.7
HNRNPU-219ENST00000639628 KCNJ4P48050 445 aa10.69□□□□□ -0.7
HNRNPU-219ENST00000639628 CHMP5Q9NZZ3 219 aa10.69□□□□□ -0.7
HNRNPU-219ENST00000639628 UHRF1BP1Q6BDS2 1440 aa10.69□□□□□ -0.7
HNRNPU-219ENST00000639628 MSNP26038 577 aaKnown RBP10.69□□□□□ -0.7
HNRNPU-219ENST00000639628 SLC4A10Q6U841 1118 aa10.68□□□□□ -0.7
HNRNPU-219ENST00000639628 WWC1Q8IX03 1113 aa10.68□□□□□ -0.7
HNRNPU-219ENST00000639628 NGDNQ8NEJ9 315 aaKnown RBP10.68□□□□□ -0.7
HNRNPU-219ENST00000639628 ST18O60284 1047 aa10.68□□□□□ -0.7
HNRNPU-219ENST00000639628 C22orf23Q9BZE7 217 aa10.68□□□□□ -0.7
HNRNPU-219ENST00000639628 SLC52A1Q9NWF4 448 aa10.68□□□□□ -0.7
HNRNPU-219ENST00000639628 AMPHP49418 695 aa10.68□□□□□ -0.7
HNRNPU-219ENST00000639628 KIAA1211Q6ZU35 1233 aa10.68□□□□□ -0.7
HNRNPU-219ENST00000639628 NSD3Q9BZ95 1437 aa10.68□□□□□ -0.7
HNRNPU-219ENST00000639628 DUOX2Q9NRD8 1548 aa10.68□□□□□ -0.7
HNRNPU-219ENST00000639628 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.68□□□□□ -0.7
HNRNPU-219ENST00000639628 PDZRN3Q9UPQ7 1066 aa10.68□□□□□ -0.7
HNRNPU-219ENST00000639628 DNTTIP2Q5QJE6 756 aaKnown RBP10.67□□□□□ -0.7
HNRNPU-219ENST00000639628 NKTRP30414 1462 aaKnown RBP10.67□□□□□ -0.7
HNRNPU-219ENST00000639628 EXOSC9Q06265 439 aaKnown RBP10.67□□□□□ -0.7
HNRNPU-219ENST00000639628 DUSP27Q5VZP5 1158 aa10.67□□□□□ -0.7
HNRNPU-219ENST00000639628 SKOR2Q2VWA4 1001 aaPredicted RBP10.66□□□□□ -0.7
HNRNPU-219ENST00000639628 SYCP2Q9BX26 1530 aa10.66□□□□□ -0.7
HNRNPU-219ENST00000639628 C20orf194Q5TEA3 1177 aa10.66□□□□□ -0.7
HNRNPU-219ENST00000639628 TPRNQ4KMQ1 711 aa10.66□□□□□ -0.7
HNRNPU-219ENST00000639628 LNPKQ9C0E8 428 aa10.66□□□□□ -0.7
HNRNPU-219ENST00000639628 HDAC5Q9UQL6 1122 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 192 ms