RNA–Protein interactions for RNA: ENST00000638139.1

SMARCA2-265, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 2,675 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-265ENST00000638139 CEP152O94986 1710 aa13.21□□□□□ -0.29
SMARCA2-265ENST00000638139 MYOM1P52179 1685 aa13.2□□□□□ -0.3
SMARCA2-265ENST00000638139 ABCC1P33527 1531 aa13.2□□□□□ -0.3
SMARCA2-265ENST00000638139 CLASP1Q7Z460 1538 aa13.2□□□□□ -0.3
SMARCA2-265ENST00000638139 ASXL1Q8IXJ9 1541 aa13.2□□□□□ -0.3
SMARCA2-265ENST00000638139 NEFMP07197 916 aa13.2□□□□□ -0.3
SMARCA2-265ENST00000638139 SCAF11Q99590 1463 aaKnown RBP13.2□□□□□ -0.3
SMARCA2-265ENST00000638139 TRAPPC8Q9Y2L5 1435 aa13.19□□□□□ -0.3
SMARCA2-265ENST00000638139 TRPM2O94759 1503 aa13.19□□□□□ -0.3
SMARCA2-265ENST00000638139 GOLGA2Q08379 1002 aa13.19□□□□□ -0.3
SMARCA2-265ENST00000638139 EFCAB2Q5VUJ9 269 aa13.19□□□□□ -0.3
SMARCA2-265ENST00000638139 CDCA8Q53HL2 280 aa13.18□□□□□ -0.3
SMARCA2-265ENST00000638139 CENPQQ7L2Z9 268 aaPredicted RBP13.18□□□□□ -0.3
SMARCA2-265ENST00000638139 USP35Q9P2H5 1018 aa13.18□□□□□ -0.3
SMARCA2-265ENST00000638139 CLTCL1P53675 1640 aa13.18□□□□□ -0.3
SMARCA2-265ENST00000638139 PIK3C2GO75747 1445 aa13.18□□□□□ -0.3
SMARCA2-265ENST00000638139 SCAPERQ9BY12 1400 aa13.18□□□□□ -0.3
SMARCA2-265ENST00000638139 DDRGK1Q96HY6 314 aa13.18□□□□□ -0.3
SMARCA2-265ENST00000638139 PPM1GO15355 546 aaPredicted RBP13.17□□□□□ -0.3
SMARCA2-265ENST00000638139 ZCCHC11Q5TAX3 1644 aaKnown RBP13.17□□□□□ -0.3
SMARCA2-265ENST00000638139 PTPRTO14522 1441 aa13.16□□□□□ -0.3
SMARCA2-265ENST00000638139 SLFN5Q08AF3 891 aa13.16□□□□□ -0.3
SMARCA2-265ENST00000638139 NPC1L1Q9UHC9 1359 aa13.16□□□□□ -0.3
SMARCA2-265ENST00000638139 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.15□□□□□ -0.3
SMARCA2-265ENST00000638139 STAC3Q96MF2 364 aa13.15□□□□□ -0.3
SMARCA2-265ENST00000638139 KDM5AP29375 1690 aaKnown RBP13.15□□□□□ -0.3
SMARCA2-265ENST00000638139 CCDC146Q8IYE0 955 aa13.15□□□□□ -0.31
SMARCA2-265ENST00000638139 TRMT2AQ8IZ69 625 aaKnown RBP13.15□□□□□ -0.31
SMARCA2-265ENST00000638139 SPAG9O60271 1321 aaKnown RBP13.14□□□□□ -0.31
SMARCA2-265ENST00000638139 DEPDC5O75140 1603 aa13.14□□□□□ -0.31
SMARCA2-265ENST00000638139 KIAA1210Q9ULL0 1709 aa13.14□□□□□ -0.31
SMARCA2-265ENST00000638139 ZFYVE16Q7Z3T8 1539 aa13.13□□□□□ -0.31
SMARCA2-265ENST00000638139 TET3O43151 1660 aa13.13□□□□□ -0.31
SMARCA2-265ENST00000638139 RTEL1-TNFRSF6BF6WH68 1400 aa13.13□□□□□ -0.31
SMARCA2-265ENST00000638139 SPINK5Q9NQ38 1064 aaPredicted RBP13.13□□□□□ -0.31
SMARCA2-265ENST00000638139 EIF3AQ14152 1382 aaKnown RBP13.12□□□□□ -0.31
SMARCA2-265ENST00000638139 FAM161AQ3B820 660 aa13.12□□□□□ -0.31
SMARCA2-265ENST00000638139 C8orf34Q49A92 452 aa13.12□□□□□ -0.31
SMARCA2-265ENST00000638139 AFAP1Q8N556 730 aa13.12□□□□□ -0.31
SMARCA2-265ENST00000638139 APAF1O14727 1248 aa13.11□□□□□ -0.31
SMARCA2-265ENST00000638139 NKTRP30414 1462 aaKnown RBP13.11□□□□□ -0.31
SMARCA2-265ENST00000638139 SLC4A3P48751 1232 aa13.1□□□□□ -0.31
SMARCA2-265ENST00000638139 UHRF1BP1LA0JNW5 1464 aa13.1□□□□□ -0.31
SMARCA2-265ENST00000638139 ERVK-7P63135 1459 aa13.09□□□□□ -0.31
SMARCA2-265ENST00000638139 VWDEQ8N2E2 1590 aa13.09□□□□□ -0.31
SMARCA2-265ENST00000638139 BCAR3O75815 825 aa13.09□□□□□ -0.31
SMARCA2-265ENST00000638139 ABCA6Q8N139 1617 aa13.09□□□□□ -0.31
SMARCA2-265ENST00000638139 MAP3K4Q9Y6R4 1608 aa13.08□□□□□ -0.32
SMARCA2-265ENST00000638139 RGS3P49796 1198 aa13.08□□□□□ -0.32
SMARCA2-265ENST00000638139 ARAP3Q8WWN8 1544 aa13.08□□□□□ -0.32
SMARCA2-265ENST00000638139 NEURL4Q96JN8 1562 aa13.08□□□□□ -0.32
SMARCA2-265ENST00000638139 E9PSI1 815 aa13.07□□□□□ -0.32
SMARCA2-265ENST00000638139 CFAP70Q5T0N1 1121 aa13.07□□□□□ -0.32
SMARCA2-265ENST00000638139 CARD14Q9BXL6 1004 aa13.07□□□□□ -0.32
SMARCA2-265ENST00000638139 DMRT2Q9Y5R5 561 aa13.07□□□□□ -0.32
SMARCA2-265ENST00000638139 NFKBIBQ15653 356 aa13.07□□□□□ -0.32
SMARCA2-265ENST00000638139 IL27Q8NEV9 243 aa13.07□□□□□ -0.32
SMARCA2-265ENST00000638139 KANK1Q14678 1352 aa13.07□□□□□ -0.32
SMARCA2-265ENST00000638139 INO80Q9ULG1 1556 aaPredicted RBP13.06□□□□□ -0.32
SMARCA2-265ENST00000638139 ATP7AQ04656 1500 aa13.06□□□□□ -0.32
SMARCA2-265ENST00000638139 UGGT1Q9NYU2 1555 aa13.06□□□□□ -0.32
SMARCA2-265ENST00000638139 KIF1BO60333 1816 aa13.06□□□□□ -0.32
SMARCA2-265ENST00000638139 DAXXQ9UER7 740 aaPredicted RBP13.06□□□□□ -0.32
SMARCA2-265ENST00000638139 VIRMAQ69YN4 1812 aaKnown RBP13.06□□□□□ -0.32
SMARCA2-265ENST00000638139 MYOM2P54296 1465 aa13.06□□□□□ -0.32
SMARCA2-265ENST00000638139 ADGRF5Q8IZF2 1346 aa13.05□□□□□ -0.32
SMARCA2-265ENST00000638139 IFT172Q9UG01 1749 aa13.05□□□□□ -0.32
SMARCA2-265ENST00000638139 KIF3BO15066 747 aa13.04□□□□□ -0.32
SMARCA2-265ENST00000638139 MROH1Q8NDA8 1641 aa13.04□□□□□ -0.32
SMARCA2-265ENST00000638139 IGHDP01880 384 aa13.04□□□□□ -0.32
SMARCA2-265ENST00000638139 NGEFQ8N5V2 710 aa13.04□□□□□ -0.32
SMARCA2-265ENST00000638139 MYO3AQ8NEV4 1616 aa13.03□□□□□ -0.32
SMARCA2-265ENST00000638139 MROH2AA6NES4 1674 aa13.03□□□□□ -0.32
SMARCA2-265ENST00000638139 ABCA9Q8IUA7 1624 aa13.02□□□□□ -0.32
SMARCA2-265ENST00000638139 GSE1Q14687 1217 aa13.02□□□□□ -0.32
SMARCA2-265ENST00000638139 POLR3AO14802 1390 aaPredicted RBP13.02□□□□□ -0.33
SMARCA2-265ENST00000638139 PDE3AQ14432 1141 aa13.02□□□□□ -0.33
SMARCA2-265ENST00000638139 SHPRHQ149N8 1683 aa13.01□□□□□ -0.33
SMARCA2-265ENST00000638139 WWC1Q8IX03 1113 aa13.01□□□□□ -0.33
SMARCA2-265ENST00000638139 CGNL1Q0VF96 1302 aa13.01□□□□□ -0.33
SMARCA2-265ENST00000638139 CENPJQ9HC77 1338 aaPredicted RBP13.01□□□□□ -0.33
SMARCA2-265ENST00000638139 FANCAO15360 1455 aa13.01□□□□□ -0.33
SMARCA2-265ENST00000638139 NRXN1Q9ULB1 1477 aa13□□□□□ -0.33
SMARCA2-265ENST00000638139 NINLQ9Y2I6 1382 aa13□□□□□ -0.33
SMARCA2-265ENST00000638139 EFCAB6Q5THR3 1501 aa13□□□□□ -0.33
SMARCA2-265ENST00000638139 SBNO2Q9Y2G9 1366 aa12.99□□□□□ -0.33
SMARCA2-265ENST00000638139 PANK1Q8TE04 598 aa12.99□□□□□ -0.33
SMARCA2-265ENST00000638139 CLUAP1Q96AJ1 413 aa12.99□□□□□ -0.33
SMARCA2-265ENST00000638139 COG6Q9Y2V7 657 aa12.99□□□□□ -0.33
SMARCA2-265ENST00000638139 USP19O94966 1318 aa12.98□□□□□ -0.33
SMARCA2-265ENST00000638139 RTN4Q9NQC3 1192 aaKnown RBP12.98□□□□□ -0.33
SMARCA2-265ENST00000638139 PPRC1Q5VV67 1664 aaKnown RBP12.98□□□□□ -0.33
SMARCA2-265ENST00000638139 CANXP27824 592 aaKnown RBP12.98□□□□□ -0.33
SMARCA2-265ENST00000638139 FRAT1Q92837 279 aaPredicted RBP12.98□□□□□ -0.33
SMARCA2-265ENST00000638139 ZC3H13Q5T200 1668 aaKnown RBP12.97□□□□□ -0.33
SMARCA2-265ENST00000638139 ADGRL1O94910 1474 aa12.97□□□□□ -0.33
SMARCA2-265ENST00000638139 NSD3Q9BZ95 1437 aa12.97□□□□□ -0.33
SMARCA2-265ENST00000638139 FRAT2O75474 233 aaPredicted RBP12.96□□□□□ -0.33
SMARCA2-265ENST00000638139 MORC1Q86VD1 984 aa12.96□□□□□ -0.33
SMARCA2-265ENST00000638139 SETBP1Q9Y6X0 1596 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms