RNA–Protein interactions for RNA: ENST00000637915.1

CTSD-213, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,982 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-213ENST00000637915 PER1O15534 1290 aaPredicted RBP22.57■■□□□ 1.2
CTSD-213ENST00000637915 ADGRF5Q8IZF2 1346 aa22.57■■□□□ 1.2
CTSD-213ENST00000637915 ZC3H13Q5T200 1668 aaKnown RBP22.57■■□□□ 1.2
CTSD-213ENST00000637915 FAM69CQ0P6D2 419 aa22.56■■□□□ 1.2
CTSD-213ENST00000637915 ZBED9Q6R2W3 1325 aa22.56■■□□□ 1.2
CTSD-213ENST00000637915 ZMYM4Q5VZL5 1548 aa22.56■■□□□ 1.2
CTSD-213ENST00000637915 FKBP8Q14318 412 aa22.56■■□□□ 1.2
CTSD-213ENST00000637915 MYBBP1AQ9BQG0 1328 aaKnown RBP22.56■■□□□ 1.2
CTSD-213ENST00000637915 PPLO60437 1756 aa22.54■■□□□ 1.2
CTSD-213ENST00000637915 NOS1P29475 1434 aa22.54■■□□□ 1.2
CTSD-213ENST00000637915 PARD3Q8TEW0 1356 aa22.54■■□□□ 1.2
CTSD-213ENST00000637915 EIF3AQ14152 1382 aaKnown RBP22.53■■□□□ 1.2
CTSD-213ENST00000637915 BRD4O60885 1362 aaPredicted RBP22.53■■□□□ 1.2
CTSD-213ENST00000637915 PIK3C2BO00750 1634 aa22.53■■□□□ 1.2
CTSD-213ENST00000637915 CFAP70Q5T0N1 1121 aa22.52■■□□□ 1.2
CTSD-213ENST00000637915 NEFLP07196 543 aa22.52■■□□□ 1.2
CTSD-213ENST00000637915 TMC1Q8TDI8 760 aa22.52■■□□□ 1.2
CTSD-213ENST00000637915 TSPOAP1O95153 1857 aa22.52■■□□□ 1.19
CTSD-213ENST00000637915 SYNMO15061 1565 aa22.51■■□□□ 1.19
CTSD-213ENST00000637915 PNISRQ8TF01 805 aaKnown RBP22.51■■□□□ 1.19
CTSD-213ENST00000637915 PANK3Q9H999 370 aa22.5■■□□□ 1.19
CTSD-213ENST00000637915 ARHGAP31Q2M1Z3 1444 aa22.5■■□□□ 1.19
CTSD-213ENST00000637915 CHGAP10645 457 aaKnown RBP22.49■■□□□ 1.19
CTSD-213ENST00000637915 PELP1Q8IZL8 1130 aaKnown RBP22.49■■□□□ 1.19
CTSD-213ENST00000637915 SETBP1Q9Y6X0 1596 aa22.48■■□□□ 1.19
CTSD-213ENST00000637915 PIK3C2GO75747 1445 aa22.47■■□□□ 1.19
CTSD-213ENST00000637915 LRPPRCP42704 1394 aaKnown RBP22.46■■□□□ 1.19
CTSD-213ENST00000637915 CDCA8Q53HL2 280 aa22.46■■□□□ 1.19
CTSD-213ENST00000637915 MYO3AQ8NEV4 1616 aa22.46■■□□□ 1.19
CTSD-213ENST00000637915 MYOM1P52179 1685 aa22.46■■□□□ 1.19
CTSD-213ENST00000637915 NLRP13Q86W25 1043 aa22.45■■□□□ 1.18
CTSD-213ENST00000637915 KDM5AP29375 1690 aaKnown RBP22.44■■□□□ 1.18
CTSD-213ENST00000637915 RPGRIP1LQ68CZ1 1315 aa22.44■■□□□ 1.18
CTSD-213ENST00000637915 BCANQ96GW7 911 aa22.43■■□□□ 1.18
CTSD-213ENST00000637915 REREQ9P2R6 1566 aa22.41■■□□□ 1.18
CTSD-213ENST00000637915 CC2D1BQ5T0F9 858 aaKnown RBP22.41■■□□□ 1.18
CTSD-213ENST00000637915 PREX1Q8TCU6 1659 aa22.41■■□□□ 1.18
CTSD-213ENST00000637915 ERVK-7P63135 1459 aa22.41■■□□□ 1.18
CTSD-213ENST00000637915 NEXMIFQ5QGS0 1516 aa22.4■■□□□ 1.18
CTSD-213ENST00000637915 ADGRB1O14514 1584 aa22.4■■□□□ 1.18
CTSD-213ENST00000637915 C14orf93Q9H972 538 aaKnown RBP22.39■■□□□ 1.17
CTSD-213ENST00000637915 SLC24A1O60721 1099 aa22.38■■□□□ 1.17
CTSD-213ENST00000637915 KIF13AQ9H1H9 1805 aa22.38■■□□□ 1.17
CTSD-213ENST00000637915 SBNO2Q9Y2G9 1366 aa22.37■■□□□ 1.17
CTSD-213ENST00000637915 AGLP35573 1532 aa22.36■■□□□ 1.17
CTSD-213ENST00000637915 IDI1Q13907 227 aa22.35■■□□□ 1.17
CTSD-213ENST00000637915 SLC52A1Q9NWF4 448 aa22.34■■□□□ 1.17
CTSD-213ENST00000637915 KNSTRNQ9Y448 316 aa22.34■■□□□ 1.17
CTSD-213ENST00000637915 SMG6Q86US8 1419 aaKnown RBP22.34■■□□□ 1.17
CTSD-213ENST00000637915 ASXL1Q8IXJ9 1541 aa22.33■■□□□ 1.17
CTSD-213ENST00000637915 MYO5BQ9ULV0 1848 aa22.33■■□□□ 1.17
CTSD-213ENST00000637915 QRICH2Q9H0J4 1663 aa22.33■■□□□ 1.17
CTSD-213ENST00000637915 CENPJQ9HC77 1338 aaPredicted RBP22.33■■□□□ 1.16
CTSD-213ENST00000637915 AMER1Q5JTC6 1135 aaPredicted RBP22.32■■□□□ 1.16
CTSD-213ENST00000637915 TMEM131LA2VDJ0 1609 aa22.32■■□□□ 1.16
CTSD-213ENST00000637915 VGFO15240 615 aaPredicted RBP22.31■■□□□ 1.16
CTSD-213ENST00000637915 TRAK1Q9UPV9 953 aa22.3■■□□□ 1.16
CTSD-213ENST00000637915 ZFYVE9O95405 1425 aa22.3■■□□□ 1.16
CTSD-213ENST00000637915 TMEM132EQ6IEE7 984 aa22.29■■□□□ 1.16
CTSD-213ENST00000637915 NUTM2DQ5VT03 806 aaPredicted RBP22.29■■□□□ 1.16
CTSD-213ENST00000637915 NPC1L1Q9UHC9 1359 aa22.28■■□□□ 1.16
CTSD-213ENST00000637915 IRX6P78412 446 aaPredicted RBP22.28■■□□□ 1.16
CTSD-213ENST00000637915 CLTCQ00610 1675 aaKnown RBP22.28■■□□□ 1.16
CTSD-213ENST00000637915 ARHGEF40Q8TER5 1519 aa22.28■■□□□ 1.16
CTSD-213ENST00000637915 SENP3-EIF4A1A0A087X0R7 540 aa22.27■■□□□ 1.16
CTSD-213ENST00000637915 NUDCQ9Y266 331 aa22.27■■□□□ 1.16
CTSD-213ENST00000637915 ARHGEF28Q8N1W1 1705 aaKnown RBP22.26■■□□□ 1.15
CTSD-213ENST00000637915 PPP6R1Q9UPN7 881 aa22.26■■□□□ 1.15
CTSD-213ENST00000637915 INSRP06213 1382 aa22.26■■□□□ 1.15
CTSD-213ENST00000637915 FBXO31Q5XUX0 539 aaPredicted RBP22.25■■□□□ 1.15
CTSD-213ENST00000637915 BLMP54132 1417 aaPredicted RBP22.24■■□□□ 1.15
CTSD-213ENST00000637915 PPP2R1AP30153 589 aa22.23■■□□□ 1.15
CTSD-213ENST00000637915 ERICH6BQ5W0A0 696 aa22.22■■□□□ 1.15
CTSD-213ENST00000637915 SPATA31D1Q6ZQQ2 1576 aa22.2■■□□□ 1.14
CTSD-213ENST00000637915 CARD14Q9BXL6 1004 aa22.19■■□□□ 1.14
CTSD-213ENST00000637915 TULP4Q9NRJ4 1543 aa22.16■■□□□ 1.14
CTSD-213ENST00000637915 RNF123Q5XPI4 1314 aa22.15■■□□□ 1.14
CTSD-213ENST00000637915 MLECQ14165 292 aa22.14■■□□□ 1.14
CTSD-213ENST00000637915 TSHZ2Q9NRE2 1034 aa22.12■■□□□ 1.13
CTSD-213ENST00000637915 ADAMTS8Q9UP79 889 aa22.12■■□□□ 1.13
CTSD-213ENST00000637915 SALL2Q9Y467 1007 aaPredicted RBP22.12■■□□□ 1.13
CTSD-213ENST00000637915 A2ML1A8K2U0 1454 aa22.11■■□□□ 1.13
CTSD-213ENST00000637915 NSD3Q9BZ95 1437 aa22.11■■□□□ 1.13
CTSD-213ENST00000637915 PDE3BQ13370 1112 aa22.11■■□□□ 1.13
CTSD-213ENST00000637915 PUS7Q96PZ0 661 aaKnown RBP22.11■■□□□ 1.13
CTSD-213ENST00000637915 ALKQ9UM73 1620 aa22.11■■□□□ 1.13
CTSD-213ENST00000637915 EVC2Q86UK5 1308 aa22.11■■□□□ 1.13
CTSD-213ENST00000637915 SLC12A5Q9H2X9 1139 aa22.1■■□□□ 1.13
CTSD-213ENST00000637915 PPP4R2Q9NY27 417 aa22.1■■□□□ 1.13
CTSD-213ENST00000637915 STAG3Q9UJ98 1225 aa22.1■■□□□ 1.13
CTSD-213ENST00000637915 PTPRMP28827 1452 aa22.1■■□□□ 1.13
CTSD-213ENST00000637915 USP32Q8NFA0 1604 aa22.1■■□□□ 1.13
CTSD-213ENST00000637915 SENP3Q9H4L4 574 aaPredicted RBP22.1■■□□□ 1.13
CTSD-213ENST00000637915 WDR43Q15061 677 aaKnown RBP eCLIP22.08■■□□□ 1.13
CTSD-213ENST00000637915 YTHDC2Q9H6S0 1430 aaKnown RBP22.08■■□□□ 1.13
CTSD-213ENST00000637915 STK26Q9P289 416 aa22.08■■□□□ 1.12
CTSD-213ENST00000637915 ZMYM3Q14202 1370 aa22.05■■□□□ 1.12
CTSD-213ENST00000637915 SAFB2Q14151 953 aaKnown RBP eCLIP22.05■■□□□ 1.12
CTSD-213ENST00000637915 RIMS2Q9UQ26 1411 aa22.04■■□□□ 1.12
CTSD-213ENST00000637915 SETD1AO15047 1707 aaKnown RBP22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms