RNA–Protein interactions for RNA: ENST00000635853.1

SPTAN1-228, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 5,870 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-228ENST00000635853 EIF3AQ14152 1382 aaKnown RBP12.02□□□□□ -0.49
SPTAN1-228ENST00000635853 LETM1O95202 739 aaPredicted RBP12.01□□□□□ -0.49
SPTAN1-228ENST00000635853 CWC15Q9P013 229 aaKnown RBP12.01□□□□□ -0.49
SPTAN1-228ENST00000635853 GPS2Q13227 327 aa12.01□□□□□ -0.49
SPTAN1-228ENST00000635853 C1orf141Q5JVX7 400 aa12.01□□□□□ -0.49
SPTAN1-228ENST00000635853 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.01□□□□□ -0.492e-7■■■■■ 86.5
SPTAN1-228ENST00000635853 NUTM2DQ5VT03 806 aaPredicted RBP12.01□□□□□ -0.49
SPTAN1-228ENST00000635853 TERF2IPQ9NYB0 399 aa12.01□□□□□ -0.49
SPTAN1-228ENST00000635853 KIF3AQ9Y496 699 aa12.01□□□□□ -0.49
SPTAN1-228ENST00000635853 DYNC1I1O14576 645 aa12.01□□□□□ -0.49
SPTAN1-228ENST00000635853 DHX16O60231 1041 aaKnown RBP12.01□□□□□ -0.49
SPTAN1-228ENST00000635853 NUTM2FA1L443 756 aa12□□□□□ -0.49
SPTAN1-228ENST00000635853 GTPBP4Q9BZE4 634 aaKnown RBP12□□□□□ -0.49
SPTAN1-228ENST00000635853 MCM4P33991 863 aa12□□□□□ -0.49
SPTAN1-228ENST00000635853 SYNE3Q6ZMZ3 975 aa12□□□□□ -0.49
SPTAN1-228ENST00000635853 CCDC43Q96MW1 224 aaKnown RBP12□□□□□ -0.49
SPTAN1-228ENST00000635853 H3BQV1 296 aa11.99□□□□□ -0.49
SPTAN1-228ENST00000635853 IFFO2Q5TF58 517 aa11.99□□□□□ -0.49
SPTAN1-228ENST00000635853 SMC4Q9NTJ3 1288 aa11.99□□□□□ -0.49
SPTAN1-228ENST00000635853 FMN1Q68DA7 1419 aa11.99□□□□□ -0.49
SPTAN1-228ENST00000635853 CCDC7Q96M83 1385 aa11.99□□□□□ -0.49
SPTAN1-228ENST00000635853 SAMD1Q6SPF0 538 aaPredicted RBP11.99□□□□□ -0.49
SPTAN1-228ENST00000635853 LMOD3Q0VAK6 560 aa11.99□□□□□ -0.49
SPTAN1-228ENST00000635853 VPS37DQ86XT2 251 aa11.98□□□□□ -0.49
SPTAN1-228ENST00000635853 SYTL4Q96C24 671 aaPredicted RBP11.98□□□□□ -0.49
SPTAN1-228ENST00000635853 CGNL1Q0VF96 1302 aa11.98□□□□□ -0.49
SPTAN1-228ENST00000635853 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.98□□□□□ -0.49
SPTAN1-228ENST00000635853 PATL2C9JE40 543 aaKnown RBP11.98□□□□□ -0.49
SPTAN1-228ENST00000635853 PCMTD1Q96MG8 357 aaPredicted RBP11.97□□□□□ -0.49
SPTAN1-228ENST00000635853 RRAGDQ9NQL2 400 aaPredicted RBP11.97□□□□□ -0.49
SPTAN1-228ENST00000635853 CBX1P83916 185 aa11.97□□□□□ -0.49
SPTAN1-228ENST00000635853 TTC5Q8N0Z6 440 aa11.97□□□□□ -0.49
SPTAN1-228ENST00000635853 WDR97A6NE52 1622 aa11.97□□□□□ -0.49
SPTAN1-228ENST00000635853 TPM1P09493 284 aa11.96□□□□□ -0.5
SPTAN1-228ENST00000635853 IRX3P78415 501 aaPredicted RBP11.96□□□□□ -0.5
SPTAN1-228ENST00000635853 NGEFQ8N5V2 710 aa11.96□□□□□ -0.5
SPTAN1-228ENST00000635853 FAM184AQ8NB25 1140 aa11.96□□□□□ -0.5
SPTAN1-228ENST00000635853 DNAJC2Q99543 621 aaKnown RBP11.96□□□□□ -0.5
SPTAN1-228ENST00000635853 C22orf23Q9BZE7 217 aa11.96□□□□□ -0.5
SPTAN1-228ENST00000635853 NUCB2P80303 420 aa11.95□□□□□ -0.5
SPTAN1-228ENST00000635853 CENPJQ9HC77 1338 aaPredicted RBP11.95□□□□□ -0.5
SPTAN1-228ENST00000635853 ST18O60284 1047 aa11.95□□□□□ -0.5
SPTAN1-228ENST00000635853 CCDC47Q96A33 483 aaKnown RBP11.95□□□□□ -0.5
SPTAN1-228ENST00000635853 CGNQ9P2M7 1197 aaKnown RBP11.95□□□□□ -0.5
SPTAN1-228ENST00000635853 PDCL2Q8N4E4 241 aa11.95□□□□□ -0.5
SPTAN1-228ENST00000635853 PKD2Q13563 968 aa11.94□□□□□ -0.5
SPTAN1-228ENST00000635853 CCDC70Q6NSX1 233 aa11.94□□□□□ -0.5
SPTAN1-228ENST00000635853 CARMIL2Q6F5E8 1435 aa11.94□□□□□ -0.5
SPTAN1-228ENST00000635853 MCTP1Q6DN14 999 aa11.94□□□□□ -0.5
SPTAN1-228ENST00000635853 RBM33Q96EV2 1170 aaKnown RBP11.94□□□□□ -0.5
SPTAN1-228ENST00000635853 RRBP1Q9P2E9 1410 aaKnown RBP11.94□□□□□ -0.5
SPTAN1-228ENST00000635853 TRIM29Q14134 588 aa11.93□□□□□ -0.5
SPTAN1-228ENST00000635853 CCDC94Q9BW85 323 aaPredicted RBP11.93□□□□□ -0.5
SPTAN1-228ENST00000635853 CALCOCO1Q9P1Z2 691 aa11.93□□□□□ -0.5
SPTAN1-228ENST00000635853 FOXD4L5Q5VV16 416 aaPredicted RBP11.93□□□□□ -0.5
SPTAN1-228ENST00000635853 FOXD4L4Q8WXT5 416 aaPredicted RBP11.93□□□□□ -0.5
SPTAN1-228ENST00000635853 CHMP4CQ96CF2 233 aa11.93□□□□□ -0.5
SPTAN1-228ENST00000635853 AAMPQ13685 434 aa11.93□□□□□ -0.5
SPTAN1-228ENST00000635853 LRRFIP1Q32MZ4 808 aaKnown RBP11.93□□□□□ -0.5
SPTAN1-228ENST00000635853 L3MBTL2Q969R5 705 aa11.93□□□□□ -0.5
SPTAN1-228ENST00000635853 EFCAB2Q5VUJ9 269 aa11.92□□□□□ -0.5
SPTAN1-228ENST00000635853 KIF3BO15066 747 aa11.92□□□□□ -0.5
SPTAN1-228ENST00000635853 XRCC6P12956 609 aaKnown RBP eCLIP11.92□□□□□ -0.5
SPTAN1-228ENST00000635853 CCAR2Q8N163 923 aaKnown RBP11.92□□□□□ -0.5
SPTAN1-228ENST00000635853 BCL11BQ9C0K0 894 aaPredicted RBP11.92□□□□□ -0.5
SPTAN1-228ENST00000635853 ARGLU1Q9NWB6 273 aaPredicted RBP11.92□□□□□ -0.5
SPTAN1-228ENST00000635853 NACADO15069 1562 aa11.92□□□□□ -0.5
SPTAN1-228ENST00000635853 MCM5P33992 734 aa11.92□□□□□ -0.5
SPTAN1-228ENST00000635853 RILPL2Q969X0 211 aa11.91□□□□□ -0.5
SPTAN1-228ENST00000635853 BRD4O60885 1362 aaPredicted RBP11.91□□□□□ -0.5
SPTAN1-228ENST00000635853 ZNF592Q92610 1267 aa11.91□□□□□ -0.5
SPTAN1-228ENST00000635853 CCAR1Q8IX12 1150 aaKnown RBP11.9□□□□□ -0.5
SPTAN1-228ENST00000635853 MPHOSPH9Q99550 1183 aa11.9□□□□□ -0.5
SPTAN1-228ENST00000635853 NEXNQ0ZGT2 675 aa11.9□□□□□ -0.5
SPTAN1-228ENST00000635853 CCDC18Q5T9S5 1454 aa11.9□□□□□ -0.5
SPTAN1-228ENST00000635853 ODF2Q5BJF6 829 aa11.9□□□□□ -0.5
SPTAN1-228ENST00000635853 WWC2Q6AWC2 1192 aa11.9□□□□□ -0.5
SPTAN1-228ENST00000635853 AEBP1Q8IUX7 1158 aa11.9□□□□□ -0.5
SPTAN1-228ENST00000635853 CCDC146Q8IYE0 955 aa11.89□□□□□ -0.51
SPTAN1-228ENST00000635853 TSPY26PQ9H489 355 aa11.89□□□□□ -0.51
SPTAN1-228ENST00000635853 CIZ1Q9ULV3 898 aaPredicted RBP11.89□□□□□ -0.51
SPTAN1-228ENST00000635853 BAZ1AQ9NRL2 1556 aaPredicted RBP11.89□□□□□ -0.51
SPTAN1-228ENST00000635853 PAF1Q8N7H5 531 aa11.89□□□□□ -0.51
SPTAN1-228ENST00000635853 TMEM132AQ24JP5 1023 aa11.89□□□□□ -0.51
SPTAN1-228ENST00000635853 CT47A1Q5JQC4 288 aaPredicted RBP11.89□□□□□ -0.51
SPTAN1-228ENST00000635853 CAVIN1Q6NZI2 390 aaKnown RBP11.89□□□□□ -0.51
SPTAN1-228ENST00000635853 MAPK8IP2Q13387 824 aaPredicted RBP11.89□□□□□ -0.51
SPTAN1-228ENST00000635853 PPP4R3BQ5MIZ7 849 aa11.89□□□□□ -0.51
SPTAN1-228ENST00000635853 TEFQ10587 303 aa11.88□□□□□ -0.51
SPTAN1-228ENST00000635853 KIF21BO75037 1637 aa11.88□□□□□ -0.51
SPTAN1-228ENST00000635853 OFD1O75665 1012 aa11.88□□□□□ -0.51
SPTAN1-228ENST00000635853 KIF20AO95235 890 aa11.88□□□□□ -0.51
SPTAN1-228ENST00000635853 NBPF1Q3BBV0 1214 aa11.88□□□□□ -0.51
SPTAN1-228ENST00000635853 ERICH2A1L162 156 aa11.88□□□□□ -0.51
SPTAN1-228ENST00000635853 GOLGA6L19H0YKK7 550 aa11.88□□□□□ -0.51
SPTAN1-228ENST00000635853 CPLX2Q6PUV4 134 aaKnown RBP11.88□□□□□ -0.51
SPTAN1-228ENST00000635853 KIF7Q2M1P5 1343 aa11.88□□□□□ -0.51
SPTAN1-228ENST00000635853 TERF1P54274 439 aa11.88□□□□□ -0.51
SPTAN1-228ENST00000635853 NFXL1Q6ZNB6 911 aa11.88□□□□□ -0.51
SPTAN1-228ENST00000635853 TIGD1Q96MW7 591 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms