RNA–Protein interactions for RNA: ENST00000630951.1

RAB28-208, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 5 BASIC

Gene RAB28, Length 1,679 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-208ENST00000630951 PPP1R15AO75807 674 aaPredicted RBP32.01■■■□□ 2.71
RAB28-208ENST00000630951 SLC4A1APQ9BWU0 796 aaKnown RBP32.01■■■□□ 2.71
RAB28-208ENST00000630951 PLEKHG1Q9ULL1 1385 aa32■■■□□ 2.71
RAB28-208ENST00000630951 SLC26A8Q96RN1 970 aa32■■■□□ 2.71
RAB28-208ENST00000630951 LRRC7Q96NW7 1537 aa31.99■■■□□ 2.71
RAB28-208ENST00000630951 BCANQ96GW7 911 aa31.98■■■□□ 2.71
RAB28-208ENST00000630951 TRPM2O94759 1503 aa31.97■■■□□ 2.71
RAB28-208ENST00000630951 ACIN1Q9UKV3 1341 aaKnown RBP31.95■■■□□ 2.71
RAB28-208ENST00000630951 TOM1O60784 492 aa31.95■■■□□ 2.7
RAB28-208ENST00000630951 KCNA6P17658 529 aa31.94■■■□□ 2.7
RAB28-208ENST00000630951 SETD5Q9C0A6 1442 aa31.89■■■□□ 2.7
RAB28-208ENST00000630951 NUTM2DQ5VT03 806 aaPredicted RBP31.89■■■□□ 2.7
RAB28-208ENST00000630951 TBX22Q9Y458 520 aa31.89■■■□□ 2.7
RAB28-208ENST00000630951 CLTCL1P53675 1640 aa31.89■■■□□ 2.7
RAB28-208ENST00000630951 ZNF326Q5BKZ1 582 aaKnown RBP31.87■■■□□ 2.69
RAB28-208ENST00000630951 MPHOSPH9Q99550 1183 aa31.86■■■□□ 2.69
RAB28-208ENST00000630951 SENP3Q9H4L4 574 aaPredicted RBP31.86■■■□□ 2.69
RAB28-208ENST00000630951 ADAMTS13Q76LX8 1427 aa31.83■■■□□ 2.69
RAB28-208ENST00000630951 NWD1Q149M9 1564 aa31.82■■■□□ 2.68
RAB28-208ENST00000630951 NKTRP30414 1462 aaKnown RBP31.81■■■□□ 2.68
RAB28-208ENST00000630951 KIF1BO60333 1816 aa31.81■■■□□ 2.68
RAB28-208ENST00000630951 PIP4K2BP78356 416 aa31.8■■■□□ 2.68
RAB28-208ENST00000630951 DIP2AQ14689 1571 aa31.8■■■□□ 2.68
RAB28-208ENST00000630951 FOXD1Q16676 465 aa31.8■■■□□ 2.68
RAB28-208ENST00000630951 PROSER2Q86WR7 435 aaPredicted RBP31.8■■■□□ 2.68
RAB28-208ENST00000630951 TMEM94Q12767 1356 aa31.79■■■□□ 2.68
RAB28-208ENST00000630951 PIK3R4Q99570 1358 aa31.79■■■□□ 2.68
RAB28-208ENST00000630951 SCAF1Q9H7N4 1312 aaKnown RBP31.78■■■□□ 2.68
RAB28-208ENST00000630951 ALKQ9UM73 1620 aa31.78■■■□□ 2.68
RAB28-208ENST00000630951 CHD2O14647 1828 aaKnown RBP31.76■■■□□ 2.68
RAB28-208ENST00000630951 XIRP1Q702N8 1843 aaKnown RBP31.76■■■□□ 2.68
RAB28-208ENST00000630951 RAB3GAP2Q9H2M9 1393 aa31.76■■■□□ 2.68
RAB28-208ENST00000630951 NEXMIFQ5QGS0 1516 aa31.75■■■□□ 2.67
RAB28-208ENST00000630951 SETBP1Q9Y6X0 1596 aa31.73■■■□□ 2.67
RAB28-208ENST00000630951 RPGRIP1LQ68CZ1 1315 aa31.72■■■□□ 2.67
RAB28-208ENST00000630951 CCDC144AA2RUR9 1427 aa31.71■■■□□ 2.67
RAB28-208ENST00000630951 VGFO15240 615 aaPredicted RBP31.7■■■□□ 2.66
RAB28-208ENST00000630951 NRXN3Q9Y4C0 1643 aa31.69■■■□□ 2.66
RAB28-208ENST00000630951 RBM33Q96EV2 1170 aaKnown RBP31.69■■■□□ 2.66
RAB28-208ENST00000630951 HRCP23327 699 aa31.67■■■□□ 2.66
RAB28-208ENST00000630951 HSPA1LP34931 641 aa31.66■■■□□ 2.66
RAB28-208ENST00000630951 NCOA3Q9Y6Q9 1424 aa31.66■■■□□ 2.66
RAB28-208ENST00000630951 AMOTL2Q9Y2J4 779 aa31.64■■■□□ 2.66
RAB28-208ENST00000630951 MSH6P52701 1360 aa31.63■■■□□ 2.65
RAB28-208ENST00000630951 PTPRUQ92729 1446 aa31.62■■■□□ 2.65
RAB28-208ENST00000630951 SPATA31E1Q6ZUB1 1445 aa31.6■■■□□ 2.65
RAB28-208ENST00000630951 METP08581 1390 aa31.6■■■□□ 2.65
RAB28-208ENST00000630951 FAM135BQ49AJ0 1406 aa31.57■■■□□ 2.64
RAB28-208ENST00000630951 PPLO60437 1756 aa31.57■■■□□ 2.64
RAB28-208ENST00000630951 RGL3Q3MIN7 710 aa31.56■■■□□ 2.64
RAB28-208ENST00000630951 C14orf37Q86TY3 774 aa31.54■■■□□ 2.64
RAB28-208ENST00000630951 XRN1Q8IZH2 1706 aaKnown RBP31.53■■■□□ 2.64
RAB28-208ENST00000630951 C19orf44Q9H6X5 657 aa31.53■■■□□ 2.64
RAB28-208ENST00000630951 ANKRD30BQ9BXX2 1392 aa31.52■■■□□ 2.64
RAB28-208ENST00000630951 SLAIN2Q9P270 581 aa31.51■■■□□ 2.63
RAB28-208ENST00000630951 CADPS2Q86UW7 1296 aa31.48■■■□□ 2.63
RAB28-208ENST00000630951 ADGRF5Q8IZF2 1346 aa31.47■■■□□ 2.63
RAB28-208ENST00000630951 SETD1AO15047 1707 aaKnown RBP31.46■■■□□ 2.63
RAB28-208ENST00000630951 DISP3Q9P2K9 1392 aa31.45■■■□□ 2.63
RAB28-208ENST00000630951 ATF3P18847 181 aa31.44■■■□□ 2.62
RAB28-208ENST00000630951 IFT172Q9UG01 1749 aa31.43■■■□□ 2.62
RAB28-208ENST00000630951 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.43■■■□□ 2.62
RAB28-208ENST00000630951 ROBO1Q9Y6N7 1651 aa31.42■■■□□ 2.62
RAB28-208ENST00000630951 DCCP43146 1447 aa31.4■■■□□ 2.62
RAB28-208ENST00000630951 PRAG1Q86YV5 1406 aa31.4■■■□□ 2.62
RAB28-208ENST00000630951 PTCH1Q13635 1447 aa31.4■■■□□ 2.62
RAB28-208ENST00000630951 PIK3C2GO75747 1445 aa31.37■■■□□ 2.61
RAB28-208ENST00000630951 ADGRL3Q9HAR2 1447 aa31.34■■■□□ 2.61
RAB28-208ENST00000630951 ROBO2Q9HCK4 1378 aa31.34■■■□□ 2.61
RAB28-208ENST00000630951 MYOM2P54296 1465 aa31.33■■■□□ 2.61
RAB28-208ENST00000630951 NRXN1Q9ULB1 1477 aa31.31■■■□□ 2.6
RAB28-208ENST00000630951 C14orf93Q9H972 538 aaKnown RBP31.29■■■□□ 2.6
RAB28-208ENST00000630951 MED1Q15648 1581 aaPredicted RBP31.28■■■□□ 2.6
RAB28-208ENST00000630951 LRPPRCP42704 1394 aaKnown RBP31.26■■■□□ 2.59
RAB28-208ENST00000630951 TECPR2O15040 1411 aa31.25■■■□□ 2.59
RAB28-208ENST00000630951 MST1RQ04912 1400 aa31.25■■■□□ 2.59
RAB28-208ENST00000630951 NALCNQ8IZF0 1738 aa31.25■■■□□ 2.59
RAB28-208ENST00000630951 ABCC11Q96J66 1382 aa31.25■■■□□ 2.59
RAB28-208ENST00000630951 TMEM132EQ6IEE7 984 aa31.25■■■□□ 2.59
RAB28-208ENST00000630951 STAC3Q96MF2 364 aa31.25■■■□□ 2.59
RAB28-208ENST00000630951 BRINP3Q76B58 766 aa31.24■■■□□ 2.59
RAB28-208ENST00000630951 STK26Q9P289 416 aa31.22■■■□□ 2.59
RAB28-208ENST00000630951 ASXL1Q8IXJ9 1541 aa31.22■■■□□ 2.59
RAB28-208ENST00000630951 PHLPP1O60346 1717 aa31.21■■■□□ 2.59
RAB28-208ENST00000630951 CFAP70Q5T0N1 1121 aa31.21■■■□□ 2.59
RAB28-208ENST00000630951 DCAF11Q8TEB1 546 aa31.2■■■□□ 2.59
RAB28-208ENST00000630951 YTHDC2Q9H6S0 1430 aaKnown RBP31.2■■■□□ 2.59
RAB28-208ENST00000630951 LAMC1P11047 1609 aa31.19■■■□□ 2.58
RAB28-208ENST00000630951 AHDC1Q5TGY3 1603 aaPredicted RBP31.18■■■□□ 2.58
RAB28-208ENST00000630951 SIRT1Q96EB6 747 aa31.17■■■□□ 2.58
RAB28-208ENST00000630951 ILDR2Q71H61 639 aa31.16■■■□□ 2.58
RAB28-208ENST00000630951 DHX57Q6P158 1386 aaKnown RBP31.16■■■□□ 2.58
RAB28-208ENST00000630951 KNDC1Q76NI1 1749 aa31.16■■■□□ 2.58
RAB28-208ENST00000630951 KDM2AQ9Y2K7 1162 aa31.16■■■□□ 2.58
RAB28-208ENST00000630951 JCADQ9P266 1359 aa31.16■■■□□ 2.58
RAB28-208ENST00000630951 COL16A1Q07092 1604 aaPredicted RBP31.15■■■□□ 2.58
RAB28-208ENST00000630951 WAPLQ7Z5K2 1190 aa31.15■■■□□ 2.58
RAB28-208ENST00000630951 C1orf167Q5SNV9 1468 aa31.14■■■□□ 2.57
RAB28-208ENST00000630951 PHF23Q9BUL5 403 aaPredicted RBP31.12■■■□□ 2.57
RAB28-208ENST00000630951 CDC42BPGQ6DT37 1551 aa31.09■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms