RNA–Protein interactions for RNA: ENST00000625662.2

CHD2-205, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 5,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-205ENST00000625662 DAPK1P53355 1430 aa14.8□□□□□ -0.04
CHD2-205ENST00000625662 TATP17735 454 aaPredicted RBP14.8□□□□□ -0.04
CHD2-205ENST00000625662 KIAA1211Q6ZU35 1233 aa14.8□□□□□ -0.04
CHD2-205ENST00000625662 KLHL34Q8N239 644 aa14.8□□□□□ -0.04
CHD2-205ENST00000625662 NOL10Q9BSC4 688 aaKnown RBP14.8□□□□□ -0.04
CHD2-205ENST00000625662 BIVM-ERCC5R4GMW8 1640 aa14.79□□□□□ -0.04
CHD2-205ENST00000625662 PLEKHO1Q53GL0 409 aaPredicted RBP14.79□□□□□ -0.04
CHD2-205ENST00000625662 PDE3BQ13370 1112 aa14.79□□□□□ -0.04
CHD2-205ENST00000625662 PRDM11Q9NQV5 511 aa14.79□□□□□ -0.04
CHD2-205ENST00000625662 LRRFIP1Q32MZ4 808 aaKnown RBP14.78□□□□□ -0.04
CHD2-205ENST00000625662 MYBBP1AQ9BQG0 1328 aaKnown RBP14.78□□□□□ -0.04
CHD2-205ENST00000625662 SLC26A8Q96RN1 970 aa14.78□□□□□ -0.04
CHD2-205ENST00000625662 RTEL1-TNFRSF6BF6WH68 1400 aa14.77□□□□□ -0.04
CHD2-205ENST00000625662 WDR7Q9Y4E6 1490 aa14.77□□□□□ -0.04
CHD2-205ENST00000625662 WDR97A6NE52 1622 aa14.77□□□□□ -0.04
CHD2-205ENST00000625662 WWC1Q8IX03 1113 aa14.77□□□□□ -0.04
CHD2-205ENST00000625662 PRAM1Q96QH2 718 aa14.77□□□□□ -0.04
CHD2-205ENST00000625662 CDK13Q14004 1512 aaKnown RBP14.77□□□□□ -0.05
CHD2-205ENST00000625662 ERBINQ96RT1 1412 aa14.77□□□□□ -0.05
CHD2-205ENST00000625662 KIAA1107Q9UPP5 1409 aa14.77□□□□□ -0.05
CHD2-205ENST00000625662 SMC4Q9NTJ3 1288 aa14.77□□□□□ -0.05
CHD2-205ENST00000625662 NAP1L2Q9ULW6 460 aaPredicted RBP14.76□□□□□ -0.05
CHD2-205ENST00000625662 STRN4Q9NRL3 753 aa14.76□□□□□ -0.05
CHD2-205ENST00000625662 HSP90AB1P08238 724 aaKnown RBP14.76□□□□□ -0.05
CHD2-205ENST00000625662 TIAM1Q13009 1591 aa14.75□□□□□ -0.05
CHD2-205ENST00000625662 AMOTL1Q8IY63 956 aa14.75□□□□□ -0.05
CHD2-205ENST00000625662 TNRQ92752 1358 aa14.75□□□□□ -0.05
CHD2-205ENST00000625662 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.75□□□□□ -0.05
CHD2-205ENST00000625662 TOM1L2Q6ZVM7 507 aa14.75□□□□□ -0.05
CHD2-205ENST00000625662 KCNH5Q8NCM2 988 aa14.75□□□□□ -0.05
CHD2-205ENST00000625662 TMEM132EQ6IEE7 984 aa14.75□□□□□ -0.05
CHD2-205ENST00000625662 GAS2L2Q8NHY3 880 aa14.75□□□□□ -0.05
CHD2-205ENST00000625662 ATAD2Q6PL18 1390 aa14.75□□□□□ -0.05
CHD2-205ENST00000625662 CADPS2Q86UW7 1296 aa14.75□□□□□ -0.05
CHD2-205ENST00000625662 FAM135AQ9P2D6 1515 aa14.74□□□□□ -0.05
CHD2-205ENST00000625662 RWDD1Q9H446 243 aaPredicted RBP14.74□□□□□ -0.05
CHD2-205ENST00000625662 ITPRIPQ8IWB1 547 aa14.74□□□□□ -0.05
CHD2-205ENST00000625662 SPG7Q9UQ90 795 aa14.74□□□□□ -0.05
CHD2-205ENST00000625662 TRIM34Q9BYJ4 488 aa14.73□□□□□ -0.05
CHD2-205ENST00000625662 CFAP70Q5T0N1 1121 aa14.73□□□□□ -0.05
CHD2-205ENST00000625662 CABP2Q9NPB3 220 aa14.73□□□□□ -0.05
CHD2-205ENST00000625662 SLC4A10Q6U841 1118 aa14.72□□□□□ -0.05
CHD2-205ENST00000625662 RBM33Q96EV2 1170 aaKnown RBP14.72□□□□□ -0.05
CHD2-205ENST00000625662 MSH6P52701 1360 aa14.72□□□□□ -0.05
CHD2-205ENST00000625662 DHX29Q7Z478 1369 aaKnown RBP14.72□□□□□ -0.05
CHD2-205ENST00000625662 CAMSAP2Q08AD1 1489 aa14.71□□□□□ -0.05
CHD2-205ENST00000625662 CNTLNQ9NXG0 1405 aa14.71□□□□□ -0.05
CHD2-205ENST00000625662 ZNF518AQ6AHZ1 1483 aa14.71□□□□□ -0.05
CHD2-205ENST00000625662 CDK19Q9BWU1 502 aa14.7□□□□□ -0.06
CHD2-205ENST00000625662 PLCH2O75038 1416 aa14.7□□□□□ -0.06
CHD2-205ENST00000625662 UBAP1LF5GYI3 381 aa14.7□□□□□ -0.06
CHD2-205ENST00000625662 PMFBP1Q8TBY8 1022 aa14.7□□□□□ -0.06
CHD2-205ENST00000625662 NUTM2GQ5VZR2 741 aa14.69□□□□□ -0.06
CHD2-205ENST00000625662 ADAMTS12P58397 1594 aa14.69□□□□□ -0.06
CHD2-205ENST00000625662 USP35Q9P2H5 1018 aa14.68□□□□□ -0.06
CHD2-205ENST00000625662 PNISRQ8TF01 805 aaKnown RBP14.68□□□□□ -0.06
CHD2-205ENST00000625662 GNAI1P63096 354 aa14.68□□□□□ -0.06
CHD2-205ENST00000625662 CHMP4CQ96CF2 233 aa14.68□□□□□ -0.06
CHD2-205ENST00000625662 EIF4G3O43432 1585 aaKnown RBP14.67□□□□□ -0.06
CHD2-205ENST00000625662 KIF6Q6ZMV9 814 aa14.67□□□□□ -0.06
CHD2-205ENST00000625662 VPS37DQ86XT2 251 aa14.67□□□□□ -0.06
CHD2-205ENST00000625662 GNL2Q13823 731 aaKnown RBP14.67□□□□□ -0.06
CHD2-205ENST00000625662 C9orf78Q9NZ63 289 aaPredicted RBP14.67□□□□□ -0.06
CHD2-205ENST00000625662 KIF21AQ7Z4S6 1674 aa14.66□□□□□ -0.06
CHD2-205ENST00000625662 NGLY1Q96IV0 654 aa14.66□□□□□ -0.06
CHD2-205ENST00000625662 CTDP1Q9Y5B0 961 aaPredicted RBP14.66□□□□□ -0.06
CHD2-205ENST00000625662 RAPGEF6Q8TEU7 1601 aa14.66□□□□□ -0.06
CHD2-205ENST00000625662 ABCC2Q92887 1545 aa14.66□□□□□ -0.06
CHD2-205ENST00000625662 THOC2Q8NI27 1593 aaKnown RBP14.65□□□□□ -0.06
CHD2-205ENST00000625662 MAP3K1Q13233 1512 aa14.65□□□□□ -0.06
CHD2-205ENST00000625662 E9PSI1 815 aa14.65□□□□□ -0.06
CHD2-205ENST00000625662 EIF2S2P20042 333 aaKnown RBP14.65□□□□□ -0.06
CHD2-205ENST00000625662 IRX6P78412 446 aaPredicted RBP14.65□□□□□ -0.06
CHD2-205ENST00000625662 PPP4R2Q9NY27 417 aa14.65□□□□□ -0.06
CHD2-205ENST00000625662 SENP3-EIF4A1A0A087X0R7 540 aa14.65□□□□□ -0.06
CHD2-205ENST00000625662 TRIM44Q96DX7 344 aaPredicted RBP14.65□□□□□ -0.06
CHD2-205ENST00000625662 API5Q9BZZ5 524 aaKnown RBP14.65□□□□□ -0.06
CHD2-205ENST00000625662 ABCC10Q5T3U5 1492 aa14.64□□□□□ -0.07
CHD2-205ENST00000625662 CCDC61Q9Y6R9 512 aa14.64□□□□□ -0.07
CHD2-205ENST00000625662 CCDC146Q8IYE0 955 aa14.64□□□□□ -0.07
CHD2-205ENST00000625662 TSPYL4Q9UJ04 414 aa14.64□□□□□ -0.07
CHD2-205ENST00000625662 CEBPAP49715 358 aaPredicted RBP14.64□□□□□ -0.07
CHD2-205ENST00000625662 GGNBP2Q9H3C7 697 aa14.63□□□□□ -0.07
CHD2-205ENST00000625662 AMOTL2Q9Y2J4 779 aa14.63□□□□□ -0.07
CHD2-205ENST00000625662 UHRF1BP1LA0JNW5 1464 aa14.63□□□□□ -0.07
CHD2-205ENST00000625662 RCAN3Q9UKA8 241 aa14.63□□□□□ -0.07
CHD2-205ENST00000625662 TULP1O00294 542 aaPredicted RBP14.62□□□□□ -0.07
CHD2-205ENST00000625662 RGS3P49796 1198 aa14.62□□□□□ -0.07
CHD2-205ENST00000625662 RUNDC1Q96C34 613 aa14.62□□□□□ -0.07
CHD2-205ENST00000625662 RBM42Q9BTD8 480 aaKnown RBP14.62□□□□□ -0.07
CHD2-205ENST00000625662 PHF8Q9UPP1 1060 aa14.62□□□□□ -0.07
CHD2-205ENST00000625662 PCF11O94913 1555 aaKnown RBP14.62□□□□□ -0.07
CHD2-205ENST00000625662 UGGT2Q9NYU1 1516 aa14.62□□□□□ -0.07
CHD2-205ENST00000625662 CABP4P57796 275 aa14.62□□□□□ -0.07
CHD2-205ENST00000625662 RIPK4P57078 832 aa14.62□□□□□ -0.07
CHD2-205ENST00000625662 SUPT16HQ9Y5B9 1047 aaKnown RBP14.62□□□□□ -0.07
CHD2-205ENST00000625662 APBB1O00213 710 aa14.61□□□□□ -0.07
CHD2-205ENST00000625662 NUP160Q12769 1436 aa14.61□□□□□ -0.07
CHD2-205ENST00000625662 NBR1Q14596 966 aa14.61□□□□□ -0.07
CHD2-205ENST00000625662 CWC22Q9HCG8 908 aaKnown RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms