RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 RIMBP3CA6NJZ7 1639 aa11.17□□□□□ -0.62
SND1-IT1-201ENST00000623342 RIMBP3BA6NNM3 1639 aa11.17□□□□□ -0.62
SND1-IT1-201ENST00000623342 RIMBP3Q9UFD9 1639 aa11.17□□□□□ -0.62
SND1-IT1-201ENST00000623342 INSRP06213 1382 aa11.16□□□□□ -0.62
SND1-IT1-201ENST00000623342 KIF1BO60333 1816 aa11.16□□□□□ -0.62
SND1-IT1-201ENST00000623342 PPRC1Q5VV67 1664 aaKnown RBP11.16□□□□□ -0.62
SND1-IT1-201ENST00000623342 MAP3K4Q9Y6R4 1608 aa11.16□□□□□ -0.62
SND1-IT1-201ENST00000623342 SENP3-EIF4A1A0A087X0R7 540 aa11.16□□□□□ -0.62
SND1-IT1-201ENST00000623342 SYNMO15061 1565 aa11.16□□□□□ -0.62
SND1-IT1-201ENST00000623342 UGGT1Q9NYU2 1555 aa11.16□□□□□ -0.62
SND1-IT1-201ENST00000623342 ZMYM4Q5VZL5 1548 aa11.16□□□□□ -0.62
SND1-IT1-201ENST00000623342 POGZQ7Z3K3 1410 aa11.15□□□□□ -0.62
SND1-IT1-201ENST00000623342 B4GALNT3Q6L9W6 998 aa11.15□□□□□ -0.62
SND1-IT1-201ENST00000623342 CFAP65Q6ZU64 1925 aaKnown RBP11.15□□□□□ -0.62
SND1-IT1-201ENST00000623342 RAPGEF3O95398 923 aa11.15□□□□□ -0.62
SND1-IT1-201ENST00000623342 MLH3Q9UHC1 1453 aa11.15□□□□□ -0.63
SND1-IT1-201ENST00000623342 PDE3BQ13370 1112 aa11.14□□□□□ -0.63
SND1-IT1-201ENST00000623342 KNSTRNQ9Y448 316 aa11.14□□□□□ -0.63
SND1-IT1-201ENST00000623342 IFT172Q9UG01 1749 aa11.14□□□□□ -0.63
SND1-IT1-201ENST00000623342 ABCA6Q8N139 1617 aa11.14□□□□□ -0.63
SND1-IT1-201ENST00000623342 HECW2Q9P2P5 1572 aa11.13□□□□□ -0.63
SND1-IT1-201ENST00000623342 SLC24A1O60721 1099 aa11.13□□□□□ -0.63
SND1-IT1-201ENST00000623342 BLMP54132 1417 aaPredicted RBP11.13□□□□□ -0.63
SND1-IT1-201ENST00000623342 FRMPD1Q5SYB0 1578 aa11.12□□□□□ -0.63
SND1-IT1-201ENST00000623342 MROH2AA6NES4 1674 aa11.12□□□□□ -0.63
SND1-IT1-201ENST00000623342 ADGRF5Q8IZF2 1346 aa11.12□□□□□ -0.63
SND1-IT1-201ENST00000623342 CFAP70Q5T0N1 1121 aa11.12□□□□□ -0.63
SND1-IT1-201ENST00000623342 NRXN1Q9ULB1 1477 aa11.11□□□□□ -0.63
SND1-IT1-201ENST00000623342 KDM5AP29375 1690 aaKnown RBP11.11□□□□□ -0.63
SND1-IT1-201ENST00000623342 MYOM1P52179 1685 aa11.11□□□□□ -0.63
SND1-IT1-201ENST00000623342 TSPOAP1O95153 1857 aa11.11□□□□□ -0.63
SND1-IT1-201ENST00000623342 ADGRB3O60242 1522 aa11.11□□□□□ -0.63
SND1-IT1-201ENST00000623342 AMER1Q5JTC6 1135 aaPredicted RBP11.11□□□□□ -0.63
SND1-IT1-201ENST00000623342 ASXL1Q8IXJ9 1541 aa11.1□□□□□ -0.63
SND1-IT1-201ENST00000623342 NEO1Q92859 1461 aa11.1□□□□□ -0.63
SND1-IT1-201ENST00000623342 SALL2Q9Y467 1007 aaPredicted RBP11.1□□□□□ -0.63
SND1-IT1-201ENST00000623342 NPATQ14207 1427 aa11.09□□□□□ -0.63
SND1-IT1-201ENST00000623342 NPC1L1Q9UHC9 1359 aa11.09□□□□□ -0.63
SND1-IT1-201ENST00000623342 PPP2R1AP30153 589 aa11.09□□□□□ -0.63
SND1-IT1-201ENST00000623342 GGT6Q6P531 493 aa11.09□□□□□ -0.63
SND1-IT1-201ENST00000623342 RRP1P56182 461 aaKnown RBP11.08□□□□□ -0.64
SND1-IT1-201ENST00000623342 RCAN3Q9UKA8 241 aa11.08□□□□□ -0.64
SND1-IT1-201ENST00000623342 NOS1P29475 1434 aa11.08□□□□□ -0.64
SND1-IT1-201ENST00000623342 SETBP1Q9Y6X0 1596 aa11.08□□□□□ -0.64
SND1-IT1-201ENST00000623342 ERVK-7P63135 1459 aa11.08□□□□□ -0.64
SND1-IT1-201ENST00000623342 MYO3AQ8NEV4 1616 aa11.08□□□□□ -0.64
SND1-IT1-201ENST00000623342 CCDC136Q96JN2 1154 aa11.08□□□□□ -0.64
SND1-IT1-201ENST00000623342 ABCC3O15438 1527 aa11.07□□□□□ -0.64
SND1-IT1-201ENST00000623342 CHGAP10645 457 aaKnown RBP11.07□□□□□ -0.64
SND1-IT1-201ENST00000623342 PIK3C2GO75747 1445 aa11.07□□□□□ -0.64
SND1-IT1-201ENST00000623342 SBNO2Q9Y2G9 1366 aa11.06□□□□□ -0.64
SND1-IT1-201ENST00000623342 PPLO60437 1756 aa11.06□□□□□ -0.64
SND1-IT1-201ENST00000623342 ADAMTS8Q9UP79 889 aa11.06□□□□□ -0.64
SND1-IT1-201ENST00000623342 FANCIQ9NVI1 1328 aa11.06□□□□□ -0.64
SND1-IT1-201ENST00000623342 WDR43Q15061 677 aaKnown RBP eCLIP11.06□□□□□ -0.64
SND1-IT1-201ENST00000623342 CDCA7LQ96GN5 454 aa11.06□□□□□ -0.64
SND1-IT1-201ENST00000623342 CAMSAP1Q5T5Y3 1602 aa11.05□□□□□ -0.64
SND1-IT1-201ENST00000623342 RPGRIP1LQ68CZ1 1315 aa11.05□□□□□ -0.64
SND1-IT1-201ENST00000623342 FAM69CQ0P6D2 419 aa11.05□□□□□ -0.64
SND1-IT1-201ENST00000623342 ANP32EQ9BTT0 268 aa11.05□□□□□ -0.64
SND1-IT1-201ENST00000623342 DIP2CQ9Y2E4 1556 aa11.04□□□□□ -0.64
SND1-IT1-201ENST00000623342 C14orf93Q9H972 538 aaKnown RBP11.04□□□□□ -0.64
SND1-IT1-201ENST00000623342 CENPJQ9HC77 1338 aaPredicted RBP11.03□□□□□ -0.64
SND1-IT1-201ENST00000623342 YEATS2Q9ULM3 1422 aa11.03□□□□□ -0.64
SND1-IT1-201ENST00000623342 RICTORQ6R327 1708 aa11.02□□□□□ -0.65
SND1-IT1-201ENST00000623342 PIK3C2BO00750 1634 aa11.02□□□□□ -0.65
SND1-IT1-201ENST00000623342 ADGRB1O14514 1584 aa11.02□□□□□ -0.65
SND1-IT1-201ENST00000623342 SIGLEC1Q9BZZ2 1709 aa11.02□□□□□ -0.65
SND1-IT1-201ENST00000623342 ZC3H13Q5T200 1668 aaKnown RBP11.01□□□□□ -0.65
SND1-IT1-201ENST00000623342 EXOC6Q8TAG9 804 aa11.01□□□□□ -0.65
SND1-IT1-201ENST00000623342 CARD14Q9BXL6 1004 aa11.01□□□□□ -0.65
SND1-IT1-201ENST00000623342 ARHGAP31Q2M1Z3 1444 aa11.01□□□□□ -0.65
SND1-IT1-201ENST00000623342 DIP2BQ9P265 1576 aa11.01□□□□□ -0.65
SND1-IT1-201ENST00000623342 TRAK1Q9UPV9 953 aa11□□□□□ -0.65
SND1-IT1-201ENST00000623342 QRICH2Q9H0J4 1663 aa11□□□□□ -0.65
SND1-IT1-201ENST00000623342 PLEKHH1Q9ULM0 1364 aa10.99□□□□□ -0.65
SND1-IT1-201ENST00000623342 VGFO15240 615 aaPredicted RBP10.99□□□□□ -0.65
SND1-IT1-201ENST00000623342 MSH5O43196 834 aa10.99□□□□□ -0.65
SND1-IT1-201ENST00000623342 ZNF521Q96K83 1311 aa10.99□□□□□ -0.65
SND1-IT1-201ENST00000623342 GLI2P10070 1586 aa10.98□□□□□ -0.65
SND1-IT1-201ENST00000623342 TMEM132EQ6IEE7 984 aa10.98□□□□□ -0.65
SND1-IT1-201ENST00000623342 NEXMIFQ5QGS0 1516 aa10.98□□□□□ -0.65
SND1-IT1-201ENST00000623342 GOLGA2Q08379 1002 aa10.97□□□□□ -0.65
SND1-IT1-201ENST00000623342 KIF13AQ9H1H9 1805 aa10.97□□□□□ -0.65
SND1-IT1-201ENST00000623342 NUTM2DQ5VT03 806 aaPredicted RBP10.96□□□□□ -0.65
SND1-IT1-201ENST00000623342 DUSP27Q5VZP5 1158 aa10.96□□□□□ -0.65
SND1-IT1-201ENST00000623342 NSD3Q9BZ95 1437 aa10.96□□□□□ -0.65
SND1-IT1-201ENST00000623342 SLC52A1Q9NWF4 448 aa10.96□□□□□ -0.66
SND1-IT1-201ENST00000623342 PLIN1O60240 522 aa10.95□□□□□ -0.66
SND1-IT1-201ENST00000623342 IDI1Q13907 227 aa10.95□□□□□ -0.66
SND1-IT1-201ENST00000623342 PUS7Q96PZ0 661 aaKnown RBP10.95□□□□□ -0.66
SND1-IT1-201ENST00000623342 ZFYVE9O95405 1425 aa10.95□□□□□ -0.66
SND1-IT1-201ENST00000623342 POLR3AO14802 1390 aaPredicted RBP10.95□□□□□ -0.66
SND1-IT1-201ENST00000623342 CCDC146Q8IYE0 955 aa10.95□□□□□ -0.66
SND1-IT1-201ENST00000623342 ARHGEF28Q8N1W1 1705 aaKnown RBP10.95□□□□□ -0.66
SND1-IT1-201ENST00000623342 SLC12A5Q9H2X9 1139 aa10.95□□□□□ -0.66
SND1-IT1-201ENST00000623342 USP32Q8NFA0 1604 aa10.94□□□□□ -0.66
SND1-IT1-201ENST00000623342 SLFN5Q08AF3 891 aa10.94□□□□□ -0.66
SND1-IT1-201ENST00000623342 MORC1Q86VD1 984 aa10.94□□□□□ -0.66
SND1-IT1-201ENST00000623342 NGEFQ8N5V2 710 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms