RNA–Protein interactions for RNA: ENST00000622457.1

LTBP4-238, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-238ENST00000622457 ITGAEP38570 1179 aa17.9■□□□□ 0.46
LTBP4-238ENST00000622457 NOS1P29475 1434 aa17.89■□□□□ 0.46
LTBP4-238ENST00000622457 LTKP29376 864 aa17.89■□□□□ 0.45
LTBP4-238ENST00000622457 PIK3C2BO00750 1634 aa17.89■□□□□ 0.45
LTBP4-238ENST00000622457 SPHKAPQ2M3C7 1700 aa17.84■□□□□ 0.45
LTBP4-238ENST00000622457 SLIT1O75093 1534 aa17.84■□□□□ 0.45
LTBP4-238ENST00000622457 SCAF11Q99590 1463 aaKnown RBP17.84■□□□□ 0.45
LTBP4-238ENST00000622457 COL16A1Q07092 1604 aaPredicted RBP17.83■□□□□ 0.45
LTBP4-238ENST00000622457 ADGRB3O60242 1522 aa17.83■□□□□ 0.45
LTBP4-238ENST00000622457 TMEM94Q12767 1356 aa17.83■□□□□ 0.45
LTBP4-238ENST00000622457 NUP155O75694 1391 aa17.82■□□□□ 0.44
LTBP4-238ENST00000622457 ARHGAP23Q9P227 1491 aa17.82■□□□□ 0.44
LTBP4-238ENST00000622457 MYO5BQ9ULV0 1848 aa17.8■□□□□ 0.44
LTBP4-238ENST00000622457 TMEM131LA2VDJ0 1609 aa17.78■□□□□ 0.44
LTBP4-238ENST00000622457 SLC52A1Q9NWF4 448 aa17.77■□□□□ 0.44
LTBP4-238ENST00000622457 TXNDC2Q86VQ3 553 aa17.76■□□□□ 0.43
LTBP4-238ENST00000622457 JCADQ9P266 1359 aa17.76■□□□□ 0.43
LTBP4-238ENST00000622457 TRPM2O94759 1503 aa17.74■□□□□ 0.43
LTBP4-238ENST00000622457 SETBP1Q9Y6X0 1596 aa17.74■□□□□ 0.43
LTBP4-238ENST00000622457 IDI1Q13907 227 aa17.73■□□□□ 0.43
LTBP4-238ENST00000622457 TMEM2Q9UHN6 1383 aa17.73■□□□□ 0.43
LTBP4-238ENST00000622457 ACIN1Q9UKV3 1341 aaKnown RBP17.72■□□□□ 0.43
LTBP4-238ENST00000622457 SHPRHQ149N8 1683 aa17.71■□□□□ 0.42
LTBP4-238ENST00000622457 KIF1BO60333 1816 aa17.7■□□□□ 0.42
LTBP4-238ENST00000622457 PROSER2Q86WR7 435 aaPredicted RBP17.69■□□□□ 0.42
LTBP4-238ENST00000622457 NWD1Q149M9 1564 aa17.69■□□□□ 0.42
LTBP4-238ENST00000622457 CLTCL1P53675 1640 aa17.69■□□□□ 0.42
LTBP4-238ENST00000622457 RGS12O14924 1447 aa17.68■□□□□ 0.42
LTBP4-238ENST00000622457 ZFYVE9O95405 1425 aa17.68■□□□□ 0.42
LTBP4-238ENST00000622457 RXRBP28702 533 aa17.68■□□□□ 0.42
LTBP4-238ENST00000622457 SLC26A8Q96RN1 970 aa17.68■□□□□ 0.42
LTBP4-238ENST00000622457 SETD5Q9C0A6 1442 aa17.67■□□□□ 0.42
LTBP4-238ENST00000622457 KCNA6P17658 529 aa17.67■□□□□ 0.42
LTBP4-238ENST00000622457 SLAIN2Q9P270 581 aa17.67■□□□□ 0.42
LTBP4-238ENST00000622457 STAG3Q9UJ98 1225 aa17.67■□□□□ 0.42
LTBP4-238ENST00000622457 MEX3CQ5U5Q3 659 aaKnown RBP17.66■□□□□ 0.42
LTBP4-238ENST00000622457 ZNF772Q68DY9 489 aaPredicted RBP17.66■□□□□ 0.42
LTBP4-238ENST00000622457 DIP2AQ14689 1571 aa17.66■□□□□ 0.42
LTBP4-238ENST00000622457 CDK12Q9NYV4 1490 aaPredicted RBP17.65■□□□□ 0.42
LTBP4-238ENST00000622457 EID1Q9Y6B2 187 aa17.64■□□□□ 0.41
LTBP4-238ENST00000622457 CHD2O14647 1828 aaKnown RBP17.63■□□□□ 0.41
LTBP4-238ENST00000622457 RIMS2Q9UQ26 1411 aa17.62■□□□□ 0.41
LTBP4-238ENST00000622457 SPATA31A6Q5VVP1 1343 aa17.61■□□□□ 0.41
LTBP4-238ENST00000622457 AHDC1Q5TGY3 1603 aaPredicted RBP17.61■□□□□ 0.41
LTBP4-238ENST00000622457 NUTM2BA6NNL0 878 aaPredicted RBP17.6■□□□□ 0.41
LTBP4-238ENST00000622457 NUTM2EB1AL46 878 aaPredicted RBP17.6■□□□□ 0.41
LTBP4-238ENST00000622457 NUTM2AQ8IVF1 878 aaPredicted RBP17.6■□□□□ 0.41
LTBP4-238ENST00000622457 SLC4A1APQ9BWU0 796 aaKnown RBP17.6■□□□□ 0.41
LTBP4-238ENST00000622457 AFF2P51816 1311 aa17.6■□□□□ 0.41
LTBP4-238ENST00000622457 RAB3GAP2Q9H2M9 1393 aa17.6■□□□□ 0.41
LTBP4-238ENST00000622457 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.59■□□□□ 0.41
LTBP4-238ENST00000622457 NKTRP30414 1462 aaKnown RBP17.59■□□□□ 0.41
LTBP4-238ENST00000622457 MSH6P52701 1360 aa17.59■□□□□ 0.41
LTBP4-238ENST00000622457 PLEKHG1Q9ULL1 1385 aa17.59■□□□□ 0.41
LTBP4-238ENST00000622457 NEXMIFQ5QGS0 1516 aa17.57■□□□□ 0.4
LTBP4-238ENST00000622457 HDGFP51858 240 aaKnown RBP17.57■□□□□ 0.4
LTBP4-238ENST00000622457 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.56■□□□□ 0.4
LTBP4-238ENST00000622457 PPLO60437 1756 aa17.56■□□□□ 0.4
LTBP4-238ENST00000622457 NRXN3Q9Y4C0 1643 aa17.55■□□□□ 0.4
LTBP4-238ENST00000622457 HRCP23327 699 aa17.54■□□□□ 0.4
LTBP4-238ENST00000622457 MPHOSPH9Q99550 1183 aa17.54■□□□□ 0.4
LTBP4-238ENST00000622457 IFT172Q9UG01 1749 aa17.54■□□□□ 0.4
LTBP4-238ENST00000622457 NUTM2DQ5VT03 806 aaPredicted RBP17.53■□□□□ 0.4
LTBP4-238ENST00000622457 CHGAP10645 457 aaKnown RBP17.52■□□□□ 0.4
LTBP4-238ENST00000622457 CCDC144AA2RUR9 1427 aa17.52■□□□□ 0.4
LTBP4-238ENST00000622457 ADAMTS13Q76LX8 1427 aa17.5■□□□□ 0.39
LTBP4-238ENST00000622457 PPP1R15AO75807 674 aaPredicted RBP17.5■□□□□ 0.39
LTBP4-238ENST00000622457 QTRT2Q9H974 415 aaKnown RBP17.5■□□□□ 0.39
LTBP4-238ENST00000622457 PIK3R4Q99570 1358 aa17.49■□□□□ 0.39
LTBP4-238ENST00000622457 SPATA31E1Q6ZUB1 1445 aa17.47■□□□□ 0.39
LTBP4-238ENST00000622457 EP400Q96L91 3159 aa17.47■□□□□ 0.39
LTBP4-238ENST00000622457 ZRANB1Q9UGI0 708 aa17.47■□□□□ 0.39
LTBP4-238ENST00000622457 XRN1Q8IZH2 1706 aaKnown RBP17.47■□□□□ 0.39
LTBP4-238ENST00000622457 NHSL1Q5SYE7 1610 aa17.47■□□□□ 0.39
LTBP4-238ENST00000622457 RBM6P78332 1123 aaKnown RBP17.46■□□□□ 0.39
LTBP4-238ENST00000622457 BRINP3Q76B58 766 aa17.46■□□□□ 0.39
LTBP4-238ENST00000622457 C8orf37Q96NL8 207 aa17.46■□□□□ 0.39
LTBP4-238ENST00000622457 RPGRIP1LQ68CZ1 1315 aa17.46■□□□□ 0.38
LTBP4-238ENST00000622457 FOXD1Q16676 465 aa17.45■□□□□ 0.38
LTBP4-238ENST00000622457 DDX17Q92841 729 aaKnown RBP17.45■□□□□ 0.38
LTBP4-238ENST00000622457 TBX22Q9Y458 520 aa17.45■□□□□ 0.38
LTBP4-238ENST00000622457 ZNF326Q5BKZ1 582 aaKnown RBP17.44■□□□□ 0.38
LTBP4-238ENST00000622457 ASXL1Q8IXJ9 1541 aa17.42■□□□□ 0.38
LTBP4-238ENST00000622457 ATAD2Q6PL18 1390 aa17.41■□□□□ 0.38
LTBP4-238ENST00000622457 BCANQ96GW7 911 aa17.41■□□□□ 0.38
LTBP4-238ENST00000622457 ANKRD30BQ9BXX2 1392 aa17.4■□□□□ 0.38
LTBP4-238ENST00000622457 NCOA3Q9Y6Q9 1424 aa17.39■□□□□ 0.38
LTBP4-238ENST00000622457 VGFO15240 615 aaPredicted RBP17.39■□□□□ 0.37
LTBP4-238ENST00000622457 LAMC1P11047 1609 aa17.39■□□□□ 0.37
LTBP4-238ENST00000622457 PNPLA6Q8IY17 1366 aa17.39■□□□□ 0.37
LTBP4-238ENST00000622457 PRAG1Q86YV5 1406 aa17.38■□□□□ 0.37
LTBP4-238ENST00000622457 C14orf37Q86TY3 774 aa17.38■□□□□ 0.37
LTBP4-238ENST00000622457 LRP5O75197 1615 aa17.38■□□□□ 0.37
LTBP4-238ENST00000622457 MYOM2P54296 1465 aa17.37■□□□□ 0.37
LTBP4-238ENST00000622457 PTPRUQ92729 1446 aa17.37■□□□□ 0.37
LTBP4-238ENST00000622457 ADAMTS2O95450 1211 aa17.35■□□□□ 0.37
LTBP4-238ENST00000622457 NRXN1Q9ULB1 1477 aa17.35■□□□□ 0.37
LTBP4-238ENST00000622457 KNDC1Q76NI1 1749 aa17.35■□□□□ 0.37
LTBP4-238ENST00000622457 PIK3C2GO75747 1445 aa17.34■□□□□ 0.37
LTBP4-238ENST00000622457 BRWD3Q6RI45 1802 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms