RNA–Protein interactions for RNA: ENST00000621973.1

DDX1-208, Transcript of DEAD-box helicase 1, humanhuman

TSL 5 BASIC

Gene DDX1, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-208ENST00000621973 POM121CA8CG34 1229 aa9.15□□□□□ -0.94
DDX1-208ENST00000621973 SKIV2LQ15477 1246 aaKnown RBP9.15□□□□□ -0.94
DDX1-208ENST00000621973 CHRDL2Q6WN34 429 aa9.15□□□□□ -0.94
DDX1-208ENST00000621973 SPDYE5A6NIY4 337 aa9.14□□□□□ -0.95
DDX1-208ENST00000621973 ZNF592Q92610 1267 aa9.14□□□□□ -0.95
DDX1-208ENST00000621973 TOP2BQ02880 1626 aa9.14□□□□□ -0.95
DDX1-208ENST00000621973 TXNDC2Q86VQ3 553 aa9.14□□□□□ -0.95
DDX1-208ENST00000621973 GLMNQ92990 594 aa9.14□□□□□ -0.95
DDX1-208ENST00000621973 PBXIP1Q96AQ6 731 aa9.14□□□□□ -0.95
DDX1-208ENST00000621973 TMUB1Q9BVT8 246 aa9.14□□□□□ -0.95
DDX1-208ENST00000621973 ARID4BQ4LE39 1312 aaPredicted RBP9.13□□□□□ -0.95
DDX1-208ENST00000621973 KDM4AO75164 1064 aa9.13□□□□□ -0.95
DDX1-208ENST00000621973 BIVM-ERCC5R4GMW8 1640 aa9.13□□□□□ -0.95
DDX1-208ENST00000621973 BOLA1Q9Y3E2 137 aa9.12□□□□□ -0.95
DDX1-208ENST00000621973 TBC1D12O60347 775 aa9.11□□□□□ -0.95
DDX1-208ENST00000621973 CLCN1P35523 988 aa9.11□□□□□ -0.95
DDX1-208ENST00000621973 GDPD2Q9HCC8 539 aa9.11□□□□□ -0.95
DDX1-208ENST00000621973 RFX1P22670 979 aa9.1□□□□□ -0.95
DDX1-208ENST00000621973 TAF7LQ5H9L4 462 aa9.1□□□□□ -0.95
DDX1-208ENST00000621973 GPCPD1Q9NPB8 672 aa9.1□□□□□ -0.95
DDX1-208ENST00000621973 CANXP27824 592 aaKnown RBP9.09□□□□□ -0.95
DDX1-208ENST00000621973 SRPK2P78362 688 aaKnown RBP9.09□□□□□ -0.95
DDX1-208ENST00000621973 CLIP1P30622 1438 aa9.08□□□□□ -0.96
DDX1-208ENST00000621973 EVI5O60447 810 aa9.08□□□□□ -0.96
DDX1-208ENST00000621973 CSB-PGBD3P0DP91 1061 aa9.08□□□□□ -0.96
DDX1-208ENST00000621973 FBXO31Q5XUX0 539 aaPredicted RBP9.08□□□□□ -0.96
DDX1-208ENST00000621973 TMED8Q6PL24 325 aaPredicted RBP9.08□□□□□ -0.96
DDX1-208ENST00000621973 DRC1Q96MC2 740 aa9.08□□□□□ -0.96
DDX1-208ENST00000621973 CFTRP13569 1480 aa9.08□□□□□ -0.96
DDX1-208ENST00000621973 RAPGEF2Q9Y4G8 1499 aa9.08□□□□□ -0.96
DDX1-208ENST00000621973 MDM2Q00987 491 aaPredicted RBP9.07□□□□□ -0.96
DDX1-208ENST00000621973 PHOX2BQ99453 314 aa9.07□□□□□ -0.96
DDX1-208ENST00000621973 SSTR3P32745 418 aaPredicted RBP9.07□□□□□ -0.96
DDX1-208ENST00000621973 NPDC1Q9NQX5 325 aaPredicted RBP9.07□□□□□ -0.96
DDX1-208ENST00000621973 CCER1Q8TC90 406 aaPredicted RBP9.06□□□□□ -0.96
DDX1-208ENST00000621973 IRX5P78411 483 aaPredicted RBP9.06□□□□□ -0.96
DDX1-208ENST00000621973 SREK1Q8WXA9 508 aaKnown RBP9.06□□□□□ -0.96
DDX1-208ENST00000621973 SIRT1Q96EB6 747 aa9.06□□□□□ -0.96
DDX1-208ENST00000621973 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.06□□□□□ -0.96
DDX1-208ENST00000621973 POLR3EQ9NVU0 708 aa9.06□□□□□ -0.96
DDX1-208ENST00000621973 CUX1P39880 1505 aa9.05□□□□□ -0.96
DDX1-208ENST00000621973 TCF3P15923 654 aa9.05□□□□□ -0.96
DDX1-208ENST00000621973 BEGAINQ9BUH8 593 aa9.05□□□□□ -0.96
DDX1-208ENST00000621973 CDHR5Q9HBB8 845 aa9.05□□□□□ -0.96
DDX1-208ENST00000621973 VPS8Q8N3P4 1428 aa9.05□□□□□ -0.96
DDX1-208ENST00000621973 CFAP70Q5T0N1 1121 aa9.05□□□□□ -0.96
DDX1-208ENST00000621973 PRXQ9BXM0 1461 aa9.04□□□□□ -0.96
DDX1-208ENST00000621973 ERICH3Q5RHP9 1530 aa9.04□□□□□ -0.96
DDX1-208ENST00000621973 G3V3G9 751 aa9.04□□□□□ -0.96
DDX1-208ENST00000621973 ANKRD13AQ8IZ07 590 aa9.04□□□□□ -0.96
DDX1-208ENST00000621973 PSMD1Q99460 953 aa9.04□□□□□ -0.96
DDX1-208ENST00000621973 OCEL1Q9H607 264 aa9.04□□□□□ -0.96
DDX1-208ENST00000621973 C19orf67A6NJJ6 358 aa9.03□□□□□ -0.96
DDX1-208ENST00000621973 ZNF16P17020 682 aaPredicted RBP9.03□□□□□ -0.96
DDX1-208ENST00000621973 NOM1Q5C9Z4 860 aaKnown RBP9.03□□□□□ -0.96
DDX1-208ENST00000621973 TMEM92Q6UXU6 159 aa9.03□□□□□ -0.96
DDX1-208ENST00000621973 ATP1B4Q9UN42 357 aaPredicted RBP9.03□□□□□ -0.96
DDX1-208ENST00000621973 EN1Q05925 392 aaPredicted RBP9.03□□□□□ -0.96
DDX1-208ENST00000621973 CC2D2BQ6DHV5 1058 aa9.03□□□□□ -0.96
DDX1-208ENST00000621973 DNAJC14Q6Y2X3 702 aaPredicted RBP9.03□□□□□ -0.96
DDX1-208ENST00000621973 MTMR14Q8NCE2 650 aa9.03□□□□□ -0.96
DDX1-208ENST00000621973 ADAMTS19Q8TE59 1207 aa9.03□□□□□ -0.96
DDX1-208ENST00000621973 TMEM88BA6NKF7 163 aa9.02□□□□□ -0.97
DDX1-208ENST00000621973 IRX6P78412 446 aaPredicted RBP9.02□□□□□ -0.97
DDX1-208ENST00000621973 VRTNQ9H8Y1 702 aa9.02□□□□□ -0.97
DDX1-208ENST00000621973 FAM217BQ9NTX9 383 aaPredicted RBP9.02□□□□□ -0.97
DDX1-208ENST00000621973 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.02□□□□□ -0.97
DDX1-208ENST00000621973 KIF27Q86VH2 1401 aa9.01□□□□□ -0.97
DDX1-208ENST00000621973 GALR2O43603 387 aaPredicted RBP9□□□□□ -0.97
DDX1-208ENST00000621973 ABL2P42684 1182 aa9□□□□□ -0.97
DDX1-208ENST00000621973 MYSM1Q5VVJ2 828 aa9□□□□□ -0.97
DDX1-208ENST00000621973 PRDM2Q13029 1718 aa9□□□□□ -0.97
DDX1-208ENST00000621973 ANKRD62A6NC57 917 aa9□□□□□ -0.97
DDX1-208ENST00000621973 ZNF526Q8TF50 670 aaPredicted RBP9□□□□□ -0.97
DDX1-208ENST00000621973 ANO8Q9HCE9 1232 aaPredicted RBP9□□□□□ -0.97
DDX1-208ENST00000621973 PPP1R1BQ9UD71 204 aaPredicted RBP9□□□□□ -0.97
DDX1-208ENST00000621973 ZC3H4Q9UPT8 1303 aaKnown RBP9□□□□□ -0.97
DDX1-208ENST00000621973 RFC5P40937 340 aa8.99□□□□□ -0.97
DDX1-208ENST00000621973 C8orf37Q96NL8 207 aa8.99□□□□□ -0.97
DDX1-208ENST00000621973 MAP3K7O43318 606 aa8.99□□□□□ -0.97
DDX1-208ENST00000621973 ATN1P54259 1190 aaPredicted RBP8.99□□□□□ -0.97
DDX1-208ENST00000621973 GIMAP6Q6P9H5 292 aa8.99□□□□□ -0.97
DDX1-208ENST00000621973 TICAM2Q86XR7 235 aa8.99□□□□□ -0.97
DDX1-208ENST00000621973 PTCD2Q8WV60 388 aaKnown RBP8.99□□□□□ -0.97
DDX1-208ENST00000621973 BCCIPQ9P287 314 aaKnown RBP eCLIP8.99□□□□□ -0.97
DDX1-208ENST00000621973 GNEQ9Y223 722 aaKnown RBP8.99□□□□□ -0.97
DDX1-208ENST00000621973 IER5LQ5T953 404 aa8.98□□□□□ -0.97
DDX1-208ENST00000621973 ZNF662Q6ZS27 426 aa8.98□□□□□ -0.97
DDX1-208ENST00000621973 BANK1Q8NDB2 785 aa8.98□□□□□ -0.97
DDX1-208ENST00000621973 PHF14O94880 888 aa8.97□□□□□ -0.97
DDX1-208ENST00000621973 METTL3Q86U44 580 aaKnown RBP8.97□□□□□ -0.97
DDX1-208ENST00000621973 NCLP19338 710 aaKnown RBP8.97□□□□□ -0.97
DDX1-208ENST00000621973 CLK2P49760 499 aaKnown RBP8.97□□□□□ -0.97
DDX1-208ENST00000621973 EPAS1Q99814 870 aa8.97□□□□□ -0.97
DDX1-208ENST00000621973 HIRIP3Q9BW71 556 aaPredicted RBP8.97□□□□□ -0.97
DDX1-208ENST00000621973 PRDM16Q9HAZ2 1276 aa8.97□□□□□ -0.97
DDX1-208ENST00000621973 TBC1D2BQ9UPU7 963 aa8.97□□□□□ -0.97
DDX1-208ENST00000621973 TSR1Q2NL82 804 aaKnown RBP8.96□□□□□ -0.98
DDX1-208ENST00000621973 NOL8Q76FK4 1167 aaKnown RBP8.96□□□□□ -0.98
DDX1-208ENST00000621973 ARAP1Q96P48 1450 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms