RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 PARD3Q8TEW0 1356 aa13.9□□□□□ -0.18
CDH1-214ENST00000621016 FAM43AQ8N2R8 423 aa13.9□□□□□ -0.18
CDH1-214ENST00000621016 GGT6Q6P531 493 aa13.89□□□□□ -0.19
CDH1-214ENST00000621016 ABCA8O94911 1581 aa13.89□□□□□ -0.19
CDH1-214ENST00000621016 BBXQ8WY36 941 aaPredicted RBP13.89□□□□□ -0.19
CDH1-214ENST00000621016 PDE3BQ13370 1112 aa13.89□□□□□ -0.19
CDH1-214ENST00000621016 TRAK1Q9UPV9 953 aa13.89□□□□□ -0.19
CDH1-214ENST00000621016 CANXP27824 592 aaKnown RBP13.88□□□□□ -0.19
CDH1-214ENST00000621016 SAMD9LQ8IVG5 1584 aa13.87□□□□□ -0.19
CDH1-214ENST00000621016 TCERG1O14776 1098 aaKnown RBP13.87□□□□□ -0.19
CDH1-214ENST00000621016 BCAR3O75815 825 aa13.87□□□□□ -0.19
CDH1-214ENST00000621016 NFKBIBQ15653 356 aa13.87□□□□□ -0.19
CDH1-214ENST00000621016 TMEM132EQ6IEE7 984 aa13.87□□□□□ -0.19
CDH1-214ENST00000621016 USP35Q9P2H5 1018 aa13.87□□□□□ -0.19
CDH1-214ENST00000621016 TRAPPC8Q9Y2L5 1435 aa13.86□□□□□ -0.19
CDH1-214ENST00000621016 GOLGA2Q08379 1002 aa13.86□□□□□ -0.19
CDH1-214ENST00000621016 SPINK5Q9NQ38 1064 aaPredicted RBP13.86□□□□□ -0.19
CDH1-214ENST00000621016 ERCC6L2Q5T890 1561 aa13.86□□□□□ -0.19
CDH1-214ENST00000621016 SHANK2Q9UPX8 1470 aa13.86□□□□□ -0.19
CDH1-214ENST00000621016 ARHGEF12Q9NZN5 1544 aa13.85□□□□□ -0.19
CDH1-214ENST00000621016 BCL2L13Q9BXK5 485 aa13.85□□□□□ -0.19
CDH1-214ENST00000621016 BACH2Q9BYV9 841 aa13.84□□□□□ -0.19
CDH1-214ENST00000621016 PNNQ9H307 717 aaKnown RBP13.84□□□□□ -0.19
CDH1-214ENST00000621016 CROCC2H7BZ55 1655 aa13.84□□□□□ -0.19
CDH1-214ENST00000621016 PLEKHH1Q9ULM0 1364 aa13.84□□□□□ -0.19
CDH1-214ENST00000621016 PLCD3Q8N3E9 789 aa13.84□□□□□ -0.19
CDH1-214ENST00000621016 PPM1GO15355 546 aaPredicted RBP13.83□□□□□ -0.2
CDH1-214ENST00000621016 RRP9O43818 475 aaKnown RBP13.83□□□□□ -0.2
CDH1-214ENST00000621016 DMRT2Q9Y5R5 561 aa13.83□□□□□ -0.2
CDH1-214ENST00000621016 ADGRF5Q8IZF2 1346 aa13.83□□□□□ -0.2
CDH1-214ENST00000621016 TTC37Q6PGP7 1564 aa13.82□□□□□ -0.2
CDH1-214ENST00000621016 KDM5DQ9BY66 1539 aa13.82□□□□□ -0.2
CDH1-214ENST00000621016 NAP1L2Q9ULW6 460 aaPredicted RBP13.82□□□□□ -0.2
CDH1-214ENST00000621016 SCAPERQ9BY12 1400 aa13.82□□□□□ -0.2
CDH1-214ENST00000621016 DUSP27Q5VZP5 1158 aa13.82□□□□□ -0.2
CDH1-214ENST00000621016 CDCA8Q53HL2 280 aa13.81□□□□□ -0.2
CDH1-214ENST00000621016 SLC12A5Q9H2X9 1139 aa13.81□□□□□ -0.2
CDH1-214ENST00000621016 ZHX1Q9UKY1 873 aaPredicted RBP13.81□□□□□ -0.2
CDH1-214ENST00000621016 ADCY10Q96PN6 1610 aa13.81□□□□□ -0.2
CDH1-214ENST00000621016 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.8□□□□□ -0.2
CDH1-214ENST00000621016 CLUAP1Q96AJ1 413 aa13.8□□□□□ -0.2
CDH1-214ENST00000621016 STK26Q9P289 416 aa13.8□□□□□ -0.2
CDH1-214ENST00000621016 MAGI2Q86UL8 1455 aa13.79□□□□□ -0.2
CDH1-214ENST00000621016 COL17A1Q9UMD9 1497 aaPredicted RBP13.79□□□□□ -0.2
CDH1-214ENST00000621016 CDC42BPBQ9Y5S2 1711 aa13.79□□□□□ -0.2
CDH1-214ENST00000621016 PANK1Q8TE04 598 aa13.79□□□□□ -0.2
CDH1-214ENST00000621016 CARD14Q9BXL6 1004 aa13.79□□□□□ -0.2
CDH1-214ENST00000621016 COG6Q9Y2V7 657 aa13.79□□□□□ -0.2
CDH1-214ENST00000621016 FRAT2O75474 233 aaPredicted RBP13.78□□□□□ -0.2
CDH1-214ENST00000621016 POLR1AO95602 1720 aaPredicted RBP13.78□□□□□ -0.2
CDH1-214ENST00000621016 MAPK8IP2Q13387 824 aaPredicted RBP13.78□□□□□ -0.2
CDH1-214ENST00000621016 MORC1Q86VD1 984 aa13.78□□□□□ -0.2
CDH1-214ENST00000621016 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.77□□□□□ -0.2
CDH1-214ENST00000621016 GPRASP1Q5JY77 1395 aa13.76□□□□□ -0.21
CDH1-214ENST00000621016 KANK1Q14678 1352 aa13.75□□□□□ -0.21
CDH1-214ENST00000621016 PLCH2O75038 1416 aa13.74□□□□□ -0.21
CDH1-214ENST00000621016 VGLL3A8MV65 326 aa13.74□□□□□ -0.21
CDH1-214ENST00000621016 SLFN5Q08AF3 891 aa13.74□□□□□ -0.21
CDH1-214ENST00000621016 DHX37Q8IY37 1157 aaKnown RBP13.74□□□□□ -0.21
CDH1-214ENST00000621016 ARHGEF5Q12774 1597 aa13.74□□□□□ -0.21
CDH1-214ENST00000621016 PRDM10Q9NQV6 1147 aa13.73□□□□□ -0.21
CDH1-214ENST00000621016 TRPM1Q7Z4N2 1603 aa13.73□□□□□ -0.21
CDH1-214ENST00000621016 TNNQ9UQP3 1299 aa13.73□□□□□ -0.21
CDH1-214ENST00000621016 U2SURPO15042 1029 aaKnown RBP13.72□□□□□ -0.21
CDH1-214ENST00000621016 PREX2Q70Z35 1606 aa13.72□□□□□ -0.21
CDH1-214ENST00000621016 NPM1P06748 294 aaKnown RBP eCLIP13.72□□□□□ -0.21
CDH1-214ENST00000621016 MS4A1P11836 297 aa13.72□□□□□ -0.21
CDH1-214ENST00000621016 PRDM4Q9UKN5 801 aa13.72□□□□□ -0.21
CDH1-214ENST00000621016 UGGT1Q9NYU2 1555 aa13.71□□□□□ -0.21
CDH1-214ENST00000621016 IGHDP01880 384 aa13.71□□□□□ -0.21
CDH1-214ENST00000621016 U2AF1L5P0DN76 240 aaPredicted RBP13.71□□□□□ -0.21
CDH1-214ENST00000621016 U2AF1Q01081 240 aaKnown RBP eCLIP13.71□□□□□ -0.21
CDH1-214ENST00000621016 TAF7LQ5H9L4 462 aa13.71□□□□□ -0.21
CDH1-214ENST00000621016 CENPQQ7L2Z9 268 aaPredicted RBP13.71□□□□□ -0.21
CDH1-214ENST00000621016 WDR7Q9Y4E6 1490 aa13.71□□□□□ -0.22
CDH1-214ENST00000621016 MTHFSP49914 203 aa13.7□□□□□ -0.22
CDH1-214ENST00000621016 CABP2Q9NPB3 220 aa13.7□□□□□ -0.22
CDH1-214ENST00000621016 DUOX2Q9NRD8 1548 aa13.7□□□□□ -0.22
CDH1-214ENST00000621016 RAPGEF3O95398 923 aa13.69□□□□□ -0.22
CDH1-214ENST00000621016 SPRYD3Q8NCJ5 442 aa13.69□□□□□ -0.22
CDH1-214ENST00000621016 TCP11L2Q8N4U5 519 aa13.69□□□□□ -0.22
CDH1-214ENST00000621016 CENPJQ9HC77 1338 aaPredicted RBP13.69□□□□□ -0.22
CDH1-214ENST00000621016 BLMP54132 1417 aaPredicted RBP13.68□□□□□ -0.22
CDH1-214ENST00000621016 EIF3AQ14152 1382 aaKnown RBP13.68□□□□□ -0.22
CDH1-214ENST00000621016 POGKQ9P215 609 aa13.68□□□□□ -0.22
CDH1-214ENST00000621016 WWC1Q8IX03 1113 aa13.68□□□□□ -0.22
CDH1-214ENST00000621016 GTF2E1P29083 439 aaPredicted RBP13.67□□□□□ -0.22
CDH1-214ENST00000621016 SRPK2P78362 688 aaKnown RBP13.67□□□□□ -0.22
CDH1-214ENST00000621016 ABCC2Q92887 1545 aa13.67□□□□□ -0.22
CDH1-214ENST00000621016 SCAF11Q99590 1463 aaKnown RBP13.67□□□□□ -0.22
CDH1-214ENST00000621016 CHD1O14646 1710 aa13.67□□□□□ -0.22
CDH1-214ENST00000621016 CFAP65Q6ZU64 1925 aaKnown RBP13.67□□□□□ -0.22
CDH1-214ENST00000621016 E9PSI1 815 aa13.67□□□□□ -0.22
CDH1-214ENST00000621016 FAM161AQ3B820 660 aa13.67□□□□□ -0.22
CDH1-214ENST00000621016 PRDM15P57071 1507 aaPredicted RBP13.67□□□□□ -0.22
CDH1-214ENST00000621016 SLKQ9H2G2 1235 aaPredicted RBP13.66□□□□□ -0.22
CDH1-214ENST00000621016 ATP10AO60312 1499 aa13.66□□□□□ -0.22
CDH1-214ENST00000621016 FBLN1P23142 703 aa13.66□□□□□ -0.22
CDH1-214ENST00000621016 TSR2Q969E8 191 aaKnown RBP13.66□□□□□ -0.22
CDH1-214ENST00000621016 GGNBP2Q9H3C7 697 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms