RNA–Protein interactions for RNA: ENST00000620652.4

AP3B2-215, Transcript of adaptor related protein complex 3 subunit beta 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene AP3B2, Length 3,729 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B2-215ENST00000620652 NCOA1Q15788 1441 aa13.21□□□□□ -0.29
AP3B2-215ENST00000620652 ZFP91Q96JP5 570 aaPredicted RBP13.21□□□□□ -0.29
AP3B2-215ENST00000620652 ANKRD50Q9ULJ7 1429 aa13.21□□□□□ -0.3
AP3B2-215ENST00000620652 ZCCHC11Q5TAX3 1644 aaKnown RBP13.21□□□□□ -0.3
AP3B2-215ENST00000620652 FSD2A1L4K1 749 aa13.2□□□□□ -0.3
AP3B2-215ENST00000620652 WDR7Q9Y4E6 1490 aa13.2□□□□□ -0.3
AP3B2-215ENST00000620652 DMTNQ08495 405 aa13.19□□□□□ -0.3
AP3B2-215ENST00000620652 MRE11P49959 708 aa13.19□□□□□ -0.3
AP3B2-215ENST00000620652 PLCH2O75038 1416 aa13.19□□□□□ -0.3
AP3B2-215ENST00000620652 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.19□□□□□ -0.3
AP3B2-215ENST00000620652 DIP2BQ9P265 1576 aa13.18□□□□□ -0.3
AP3B2-215ENST00000620652 FTSJ3Q8IY81 847 aaKnown RBP13.18□□□□□ -0.3
AP3B2-215ENST00000620652 CCDC141Q6ZP82 1450 aa13.18□□□□□ -0.3
AP3B2-215ENST00000620652 R3HCC1Q9Y3T6 440 aaKnown RBP13.17□□□□□ -0.3
AP3B2-215ENST00000620652 FAM161AQ3B820 660 aa13.17□□□□□ -0.3
AP3B2-215ENST00000620652 DNMT1P26358 1616 aaKnown RBP13.16□□□□□ -0.3
AP3B2-215ENST00000620652 FAM69CQ0P6D2 419 aa13.16□□□□□ -0.3
AP3B2-215ENST00000620652 TTC37Q6PGP7 1564 aa13.16□□□□□ -0.3
AP3B2-215ENST00000620652 CDK11BP21127 795 aaKnown RBP13.16□□□□□ -0.3
AP3B2-215ENST00000620652 GRPEL1Q9HAV7 217 aa13.16□□□□□ -0.3
AP3B2-215ENST00000620652 CNTLNQ9NXG0 1405 aa13.16□□□□□ -0.3
AP3B2-215ENST00000620652 UTP14CQ5TAP6 766 aaKnown RBP13.15□□□□□ -0.3
AP3B2-215ENST00000620652 SYCP2Q9BX26 1530 aa13.15□□□□□ -0.3
AP3B2-215ENST00000620652 RCAN3Q9UKA8 241 aa13.15□□□□□ -0.3
AP3B2-215ENST00000620652 PLEKHH2Q8IVE3 1493 aa13.15□□□□□ -0.3
AP3B2-215ENST00000620652 PLIN1O60240 522 aa13.14□□□□□ -0.31
AP3B2-215ENST00000620652 CARD11Q9BXL7 1154 aa13.14□□□□□ -0.31
AP3B2-215ENST00000620652 C8orf34Q49A92 452 aa13.14□□□□□ -0.31
AP3B2-215ENST00000620652 CDC42BPAQ5VT25 1732 aa13.13□□□□□ -0.31
AP3B2-215ENST00000620652 CD109Q6YHK3 1445 aa13.13□□□□□ -0.31
AP3B2-215ENST00000620652 SCAPERQ9BY12 1400 aa13.13□□□□□ -0.31
AP3B2-215ENST00000620652 PPRC1Q5VV67 1664 aaKnown RBP13.13□□□□□ -0.31
AP3B2-215ENST00000620652 ZBTB22O15209 634 aa13.13□□□□□ -0.31
AP3B2-215ENST00000620652 FANCAO15360 1455 aa13.13□□□□□ -0.31
AP3B2-215ENST00000620652 ZSCAN20P17040 1043 aaPredicted RBP13.13□□□□□ -0.31
AP3B2-215ENST00000620652 SPRYD3Q8NCJ5 442 aa13.12□□□□□ -0.31
AP3B2-215ENST00000620652 GLI2P10070 1586 aa13.12□□□□□ -0.31
AP3B2-215ENST00000620652 UQCRHLA0A096LP55 91 aa13.12□□□□□ -0.31
AP3B2-215ENST00000620652 KIF3BO15066 747 aa13.12□□□□□ -0.31
AP3B2-215ENST00000620652 UQCRHP07919 91 aa13.12□□□□□ -0.31
AP3B2-215ENST00000620652 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.12□□□□□ -0.31
AP3B2-215ENST00000620652 MBD5Q9P267 1494 aa13.12□□□□□ -0.31
AP3B2-215ENST00000620652 E9PSI1 815 aa13.11□□□□□ -0.31
AP3B2-215ENST00000620652 OFD1O75665 1012 aa13.11□□□□□ -0.31
AP3B2-215ENST00000620652 BECN1Q14457 450 aa13.11□□□□□ -0.31
AP3B2-215ENST00000620652 CHMP4AQ9BY43 222 aa13.11□□□□□ -0.31
AP3B2-215ENST00000620652 TRAPPC8Q9Y2L5 1435 aa13.11□□□□□ -0.31
AP3B2-215ENST00000620652 DNTTIP2Q5QJE6 756 aaKnown RBP13.11□□□□□ -0.31
AP3B2-215ENST00000620652 KIF7Q2M1P5 1343 aa13.11□□□□□ -0.31
AP3B2-215ENST00000620652 SECISBP2LQ93073 1101 aaKnown RBP13.11□□□□□ -0.31
AP3B2-215ENST00000620652 SAMD9LQ8IVG5 1584 aa13.1□□□□□ -0.31
AP3B2-215ENST00000620652 BRD2P25440 801 aaKnown RBP13.1□□□□□ -0.31
AP3B2-215ENST00000620652 MSNP26038 577 aaKnown RBP13.1□□□□□ -0.31
AP3B2-215ENST00000620652 MAP3K4Q9Y6R4 1608 aa13.1□□□□□ -0.31
AP3B2-215ENST00000620652 ST20-MTHFSA0A0A6YYL1 179 aa13.1□□□□□ -0.31
AP3B2-215ENST00000620652 TRAK2O60296 914 aa13.1□□□□□ -0.31
AP3B2-215ENST00000620652 CRBNQ96SW2 442 aa13.1□□□□□ -0.31
AP3B2-215ENST00000620652 KIAA1107Q9UPP5 1409 aa13.1□□□□□ -0.31
AP3B2-215ENST00000620652 ADGRL1O94910 1474 aa13.09□□□□□ -0.31
AP3B2-215ENST00000620652 RAPGEF3O95398 923 aa13.09□□□□□ -0.31
AP3B2-215ENST00000620652 DENND4BO75064 1496 aaPredicted RBP13.09□□□□□ -0.31
AP3B2-215ENST00000620652 PREX2Q70Z35 1606 aa13.08□□□□□ -0.31
AP3B2-215ENST00000620652 GGT6Q6P531 493 aa13.08□□□□□ -0.32
AP3B2-215ENST00000620652 MTERF4Q7Z6M4 381 aaKnown RBP13.08□□□□□ -0.32
AP3B2-215ENST00000620652 MCM4P33991 863 aa13.08□□□□□ -0.32
AP3B2-215ENST00000620652 ADGRL2O95490 1459 aa13.07□□□□□ -0.32
AP3B2-215ENST00000620652 SHANK2Q9UPX8 1470 aa13.07□□□□□ -0.32
AP3B2-215ENST00000620652 CBX1P83916 185 aa13.06□□□□□ -0.32
AP3B2-215ENST00000620652 NBPF1Q3BBV0 1214 aa13.06□□□□□ -0.32
AP3B2-215ENST00000620652 CGNQ9P2M7 1197 aaKnown RBP13.06□□□□□ -0.32
AP3B2-215ENST00000620652 MYO5CQ9NQX4 1742 aa13.06□□□□□ -0.32
AP3B2-215ENST00000620652 CC2D1BQ5T0F9 858 aaKnown RBP13.06□□□□□ -0.32
AP3B2-215ENST00000620652 TMC1Q8TDI8 760 aa13.06□□□□□ -0.32
AP3B2-215ENST00000620652 CDC42BPBQ9Y5S2 1711 aa13.06□□□□□ -0.32
AP3B2-215ENST00000620652 KIF20AO95235 890 aa13.05□□□□□ -0.32
AP3B2-215ENST00000620652 CCDC94Q9BW85 323 aaPredicted RBP13.05□□□□□ -0.32
AP3B2-215ENST00000620652 KTN1Q86UP2 1357 aaKnown RBP13.05□□□□□ -0.32
AP3B2-215ENST00000620652 ARHGEF12Q9NZN5 1544 aa13.05□□□□□ -0.32
AP3B2-215ENST00000620652 ZSCAN30Q86W11 494 aa13.05□□□□□ -0.32
AP3B2-215ENST00000620652 ANKRD30BQ9BXX2 1392 aa13.05□□□□□ -0.32
AP3B2-215ENST00000620652 NCBP3Q53F19 620 aaKnown RBP13.05□□□□□ -0.32
AP3B2-215ENST00000620652 GCC2Q8IWJ2 1684 aa13.05□□□□□ -0.32
AP3B2-215ENST00000620652 CCDC7Q96M83 1385 aa13.04□□□□□ -0.32
AP3B2-215ENST00000620652 TEX2Q8IWB9 1127 aa13.04□□□□□ -0.32
AP3B2-215ENST00000620652 CERS3Q8IU89 383 aa13.03□□□□□ -0.32
AP3B2-215ENST00000620652 ARHGEF5Q12774 1597 aa13.03□□□□□ -0.32
AP3B2-215ENST00000620652 TRHP20396 242 aaPredicted RBP13.03□□□□□ -0.32
AP3B2-215ENST00000620652 TERF1P54274 439 aa13.03□□□□□ -0.32
AP3B2-215ENST00000620652 IGSF3O75054 1194 aa13.02□□□□□ -0.32
AP3B2-215ENST00000620652 LETM1O95202 739 aaPredicted RBP13.02□□□□□ -0.32
AP3B2-215ENST00000620652 CHGAP10645 457 aaKnown RBP13.02□□□□□ -0.32
AP3B2-215ENST00000620652 GTPBP4Q9BZE4 634 aaKnown RBP13.02□□□□□ -0.32
AP3B2-215ENST00000620652 ANTXR1Q9H6X2 564 aa13.02□□□□□ -0.32
AP3B2-215ENST00000620652 KANK1Q14678 1352 aa13.02□□□□□ -0.32
AP3B2-215ENST00000620652 XPCQ01831 940 aaPredicted RBP13.02□□□□□ -0.33
AP3B2-215ENST00000620652 USP47Q96K76 1375 aa13.01□□□□□ -0.33
AP3B2-215ENST00000620652 TSPOAP1O95153 1857 aa13□□□□□ -0.33
AP3B2-215ENST00000620652 DYNC1I1O14576 645 aa13□□□□□ -0.33
AP3B2-215ENST00000620652 PZPP20742 1482 aa13□□□□□ -0.33
AP3B2-215ENST00000620652 IRX3P78415 501 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms