RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 MIA2Q96PC5 1412 aa12.39□□□□□ -0.43
TNFAIP3-210ENST00000620204 APAF1O14727 1248 aa12.38□□□□□ -0.43
TNFAIP3-210ENST00000620204 PDCL3Q9H2J4 239 aa12.38□□□□□ -0.43
TNFAIP3-210ENST00000620204 KNSTRNQ9Y448 316 aa12.38□□□□□ -0.43
TNFAIP3-210ENST00000620204 CHMP5Q9NZZ3 219 aa12.38□□□□□ -0.43
TNFAIP3-210ENST00000620204 LRPPRCP42704 1394 aaKnown RBP12.37□□□□□ -0.43
TNFAIP3-210ENST00000620204 HSP90AB1P08238 724 aaKnown RBP12.37□□□□□ -0.43
TNFAIP3-210ENST00000620204 ZHX1Q9UKY1 873 aaPredicted RBP12.37□□□□□ -0.43
TNFAIP3-210ENST00000620204 ERBB4Q15303 1308 aa12.36□□□□□ -0.43
TNFAIP3-210ENST00000620204 SPATA31E1Q6ZUB1 1445 aa12.36□□□□□ -0.43
TNFAIP3-210ENST00000620204 TPM2P07951 284 aa12.36□□□□□ -0.43
TNFAIP3-210ENST00000620204 DUSP27Q5VZP5 1158 aa12.36□□□□□ -0.43
TNFAIP3-210ENST00000620204 MAPK8IP3Q9UPT6 1336 aa12.35□□□□□ -0.43
TNFAIP3-210ENST00000620204 CHGAP10645 457 aaKnown RBP12.35□□□□□ -0.43
TNFAIP3-210ENST00000620204 PLPPR3Q6T4P5 718 aa12.34□□□□□ -0.43
TNFAIP3-210ENST00000620204 DNTTIP2Q5QJE6 756 aaKnown RBP12.34□□□□□ -0.43
TNFAIP3-210ENST00000620204 SPAG9O60271 1321 aaKnown RBP12.34□□□□□ -0.43
TNFAIP3-210ENST00000620204 ABCA8O94911 1581 aa12.34□□□□□ -0.43
TNFAIP3-210ENST00000620204 RPRD2Q5VT52 1461 aaKnown RBP12.34□□□□□ -0.43
TNFAIP3-210ENST00000620204 NBPF1Q3BBV0 1214 aa12.33□□□□□ -0.44
TNFAIP3-210ENST00000620204 TNNT2P45379 298 aaPredicted RBP12.33□□□□□ -0.44
TNFAIP3-210ENST00000620204 C22orf23Q9BZE7 217 aa12.33□□□□□ -0.44
TNFAIP3-210ENST00000620204 DDX11L8A8MPP1 907 aa12.33□□□□□ -0.44
TNFAIP3-210ENST00000620204 C9orf84Q5VXU9 1444 aa12.32□□□□□ -0.44
TNFAIP3-210ENST00000620204 USP19O94966 1318 aa12.32□□□□□ -0.44
TNFAIP3-210ENST00000620204 RRP7AQ9Y3A4 280 aaKnown RBP12.32□□□□□ -0.44
TNFAIP3-210ENST00000620204 TPRNQ4KMQ1 711 aa12.32□□□□□ -0.44
TNFAIP3-210ENST00000620204 PDZRN3Q9UPQ7 1066 aa12.32□□□□□ -0.44
TNFAIP3-210ENST00000620204 ANKRD50Q9ULJ7 1429 aa12.32□□□□□ -0.44
TNFAIP3-210ENST00000620204 GGT6Q6P531 493 aa12.31□□□□□ -0.44
TNFAIP3-210ENST00000620204 KIF3BO15066 747 aa12.31□□□□□ -0.44
TNFAIP3-210ENST00000620204 NASPP49321 788 aaPredicted RBP12.31□□□□□ -0.44
TNFAIP3-210ENST00000620204 GBP4Q96PP9 640 aa12.31□□□□□ -0.44
TNFAIP3-210ENST00000620204 FSD2A1L4K1 749 aa12.3□□□□□ -0.44
TNFAIP3-210ENST00000620204 GOLGA6L22H0YM25 854 aa12.3□□□□□ -0.44
TNFAIP3-210ENST00000620204 DDX49Q9Y6V7 483 aaKnown RBP12.3□□□□□ -0.44
TNFAIP3-210ENST00000620204 ANTXR1Q9H6X2 564 aa12.3□□□□□ -0.44
TNFAIP3-210ENST00000620204 ABCC2Q92887 1545 aa12.3□□□□□ -0.44
TNFAIP3-210ENST00000620204 CENPJQ9HC77 1338 aaPredicted RBP12.3□□□□□ -0.44
TNFAIP3-210ENST00000620204 SPINK5Q9NQ38 1064 aaPredicted RBP12.29□□□□□ -0.44
TNFAIP3-210ENST00000620204 PTMAP06454 111 aaKnown RBP12.29□□□□□ -0.44
TNFAIP3-210ENST00000620204 GAS2L3Q86XJ1 694 aa12.29□□□□□ -0.44
TNFAIP3-210ENST00000620204 XPCQ01831 940 aaPredicted RBP12.29□□□□□ -0.44
TNFAIP3-210ENST00000620204 TBC1D32Q96NH3 1257 aa12.29□□□□□ -0.44
TNFAIP3-210ENST00000620204 DENND4BO75064 1496 aaPredicted RBP12.29□□□□□ -0.44
TNFAIP3-210ENST00000620204 CGNL1Q0VF96 1302 aa12.28□□□□□ -0.44
TNFAIP3-210ENST00000620204 FAM69CQ0P6D2 419 aa12.28□□□□□ -0.44
TNFAIP3-210ENST00000620204 MPNDQ8N594 471 aa12.28□□□□□ -0.44
TNFAIP3-210ENST00000620204 TMF1P82094 1093 aa12.28□□□□□ -0.44
TNFAIP3-210ENST00000620204 FTSJ3Q8IY81 847 aaKnown RBP12.28□□□□□ -0.44
TNFAIP3-210ENST00000620204 TCOF1Q13428 1488 aaKnown RBP12.27□□□□□ -0.44
TNFAIP3-210ENST00000620204 KDM6BO15054 1643 aa12.27□□□□□ -0.44
TNFAIP3-210ENST00000620204 RAPGEF3O95398 923 aa12.27□□□□□ -0.44
TNFAIP3-210ENST00000620204 PLEKHH1Q9ULM0 1364 aa12.27□□□□□ -0.45
TNFAIP3-210ENST00000620204 MLECQ14165 292 aa12.27□□□□□ -0.45
TNFAIP3-210ENST00000620204 UQCRHLA0A096LP55 91 aa12.27□□□□□ -0.45
TNFAIP3-210ENST00000620204 UQCRHP07919 91 aa12.27□□□□□ -0.45
TNFAIP3-210ENST00000620204 SLFN5Q08AF3 891 aa12.27□□□□□ -0.45
TNFAIP3-210ENST00000620204 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.27□□□□□ -0.45
TNFAIP3-210ENST00000620204 PMFBP1Q8TBY8 1022 aa12.27□□□□□ -0.45
TNFAIP3-210ENST00000620204 RWDD1Q9H446 243 aaPredicted RBP12.27□□□□□ -0.45
TNFAIP3-210ENST00000620204 ZSCAN30Q86W11 494 aa12.26□□□□□ -0.45
TNFAIP3-210ENST00000620204 TNNQ9UQP3 1299 aa12.26□□□□□ -0.45
TNFAIP3-210ENST00000620204 ASXL2Q76L83 1435 aa12.25□□□□□ -0.45
TNFAIP3-210ENST00000620204 SYCP2Q9BX26 1530 aa12.25□□□□□ -0.45
TNFAIP3-210ENST00000620204 TEX14Q8IWB6 1497 aa12.25□□□□□ -0.45
TNFAIP3-210ENST00000620204 PPP2R1AP30153 589 aa12.25□□□□□ -0.45
TNFAIP3-210ENST00000620204 RSPH4AQ5TD94 716 aa12.25□□□□□ -0.45
TNFAIP3-210ENST00000620204 TNPO1Q92973 898 aaKnown RBP12.25□□□□□ -0.45
TNFAIP3-210ENST00000620204 SCAPERQ9BY12 1400 aa12.25□□□□□ -0.45
TNFAIP3-210ENST00000620204 TRHP20396 242 aaPredicted RBP12.24□□□□□ -0.45
TNFAIP3-210ENST00000620204 CALD1Q05682 793 aaKnown RBP12.24□□□□□ -0.45
TNFAIP3-210ENST00000620204 CLASP1Q7Z460 1538 aa12.24□□□□□ -0.45
TNFAIP3-210ENST00000620204 PCDHB15Q9Y5E8 787 aa12.24□□□□□ -0.45
TNFAIP3-210ENST00000620204 PER1O15534 1290 aaPredicted RBP12.24□□□□□ -0.45
TNFAIP3-210ENST00000620204 FOXD4L5Q5VV16 416 aaPredicted RBP12.24□□□□□ -0.45
TNFAIP3-210ENST00000620204 FOXD4L4Q8WXT5 416 aaPredicted RBP12.24□□□□□ -0.45
TNFAIP3-210ENST00000620204 ITSN2Q9NZM3 1697 aa12.23□□□□□ -0.45
TNFAIP3-210ENST00000620204 ABCC10Q5T3U5 1492 aa12.23□□□□□ -0.45
TNFAIP3-210ENST00000620204 E9PSI1 815 aa12.23□□□□□ -0.45
TNFAIP3-210ENST00000620204 TTC37Q6PGP7 1564 aa12.22□□□□□ -0.45
TNFAIP3-210ENST00000620204 CCDC173Q0VFZ6 552 aa12.22□□□□□ -0.45
TNFAIP3-210ENST00000620204 CCDC141Q6ZP82 1450 aa12.22□□□□□ -0.45
TNFAIP3-210ENST00000620204 DMRT2Q9Y5R5 561 aa12.22□□□□□ -0.45
TNFAIP3-210ENST00000620204 ROCK1Q13464 1354 aa12.22□□□□□ -0.45
TNFAIP3-210ENST00000620204 CAVIN1Q6NZI2 390 aaKnown RBP12.22□□□□□ -0.45
TNFAIP3-210ENST00000620204 PARD3Q8TEW0 1356 aa12.22□□□□□ -0.45
TNFAIP3-210ENST00000620204 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.21□□□□□ -0.45
TNFAIP3-210ENST00000620204 RNF214Q8ND24 703 aa12.21□□□□□ -0.45
TNFAIP3-210ENST00000620204 TRAPPC8Q9Y2L5 1435 aa12.21□□□□□ -0.45
TNFAIP3-210ENST00000620204 DNMT1P26358 1616 aaKnown RBP12.21□□□□□ -0.46
TNFAIP3-210ENST00000620204 ZCCHC11Q5TAX3 1644 aaKnown RBP12.2□□□□□ -0.46
TNFAIP3-210ENST00000620204 PLCB2Q00722 1185 aa12.2□□□□□ -0.46
TNFAIP3-210ENST00000620204 BCORL1Q5H9F3 1711 aa12.2□□□□□ -0.46
TNFAIP3-210ENST00000620204 AAMPQ13685 434 aa12.2□□□□□ -0.46
TNFAIP3-210ENST00000620204 MCTP1Q6DN14 999 aa12.2□□□□□ -0.46
TNFAIP3-210ENST00000620204 ITPRIPQ8IWB1 547 aa12.2□□□□□ -0.46
TNFAIP3-210ENST00000620204 WDR7Q9Y4E6 1490 aa12.2□□□□□ -0.46
TNFAIP3-210ENST00000620204 OFD1O75665 1012 aa12.2□□□□□ -0.46
TNFAIP3-210ENST00000620204 SKOR2Q2VWA4 1001 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms