RNA–Protein interactions for RNA: ENST00000619831.4

DMD-229, Transcript of dystrophin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DMD, Length 13,734 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-229ENST00000619831 PAXIP1Q6ZW49 1069 aaPredicted RBP5.42□□□□□ -1.54
DMD-229ENST00000619831 CCDC18Q5T9S5 1454 aa5.42□□□□□ -1.54
DMD-229ENST00000619831 VPS37CA5D8V6 355 aaPredicted RBP5.42□□□□□ -1.54
DMD-229ENST00000619831 GPATCH11Q8N954 259 aa5.42□□□□□ -1.54
DMD-229ENST00000619831 DTNBO60941 627 aa5.42□□□□□ -1.54
DMD-229ENST00000619831 TPM2P07951 284 aa5.42□□□□□ -1.54
DMD-229ENST00000619831 PDZRN3Q9UPQ7 1066 aa5.42□□□□□ -1.54
DMD-229ENST00000619831 CNTLNQ9NXG0 1405 aa5.42□□□□□ -1.54
DMD-229ENST00000619831 USP47Q96K76 1375 aa5.42□□□□□ -1.54
DMD-229ENST00000619831 MLECQ14165 292 aa5.42□□□□□ -1.54
DMD-229ENST00000619831 PDILTQ8N807 584 aa5.42□□□□□ -1.54
DMD-229ENST00000619831 DDX54Q8TDD1 881 aaKnown RBP5.41□□□□□ -1.54
DMD-229ENST00000619831 KIF15Q9NS87 1388 aa5.41□□□□□ -1.54
DMD-229ENST00000619831 SYAP1Q96A49 352 aaPredicted RBP5.41□□□□□ -1.54
DMD-229ENST00000619831 WWC1Q8IX03 1113 aa5.41□□□□□ -1.54
DMD-229ENST00000619831 GOLGA6L1Q8N7Z2 621 aa5.41□□□□□ -1.54
DMD-229ENST00000619831 CHMP5Q9NZZ3 219 aa5.41□□□□□ -1.54
DMD-229ENST00000619831 CHMP4CQ96CF2 233 aa5.41□□□□□ -1.54
DMD-229ENST00000619831 CUX2O14529 1486 aa5.41□□□□□ -1.54
DMD-229ENST00000619831 NGEFQ8N5V2 710 aa5.41□□□□□ -1.54
DMD-229ENST00000619831 BBXQ8WY36 941 aaPredicted RBP5.41□□□□□ -1.54
DMD-229ENST00000619831 ANO2Q9NQ90 1003 aa5.41□□□□□ -1.54
DMD-229ENST00000619831 CCDC7Q96M83 1385 aa5.41□□□□□ -1.54
DMD-229ENST00000619831 HOMER1Q86YM7 354 aa5.4□□□□□ -1.54
DMD-229ENST00000619831 FMNL2Q96PY5 1086 aa5.4□□□□□ -1.54
DMD-229ENST00000619831 NUP155O75694 1391 aa5.4□□□□□ -1.54
DMD-229ENST00000619831 HNRNPMP52272 730 aaKnown RBP eCLIP5.4□□□□□ -1.54
DMD-229ENST00000619831 RALBP1Q15311 655 aa5.4□□□□□ -1.54
DMD-229ENST00000619831 POLR1AO95602 1720 aaPredicted RBP5.4□□□□□ -1.54
DMD-229ENST00000619831 TSR2Q969E8 191 aaKnown RBP5.4□□□□□ -1.55
DMD-229ENST00000619831 MS4A1P11836 297 aa5.4□□□□□ -1.55
DMD-229ENST00000619831 FAM193AP78312 1265 aa5.4□□□□□ -1.55
DMD-229ENST00000619831 C17orf53Q8N3J3 647 aaPredicted RBP5.4□□□□□ -1.55
DMD-229ENST00000619831 TSPY26PQ9H489 355 aa5.39□□□□□ -1.55
DMD-229ENST00000619831 SYCE3A1L190 88 aa5.39□□□□□ -1.55
DMD-229ENST00000619831 CERS3Q8IU89 383 aa5.39□□□□□ -1.55
DMD-229ENST00000619831 SSFA2P28290 1259 aa5.39□□□□□ -1.55
DMD-229ENST00000619831 TSC1Q92574 1164 aa5.39□□□□□ -1.55
DMD-229ENST00000619831 CCDC39Q9UFE4 941 aa5.39□□□□□ -1.55
DMD-229ENST00000619831 MRE11P49959 708 aa5.39□□□□□ -1.55
DMD-229ENST00000619831 ERICH3Q5RHP9 1530 aa5.39□□□□□ -1.55
DMD-229ENST00000619831 PPFIA3O75145 1194 aa5.39□□□□□ -1.55
DMD-229ENST00000619831 ESF1Q9H501 851 aaKnown RBP5.39□□□□□ -1.55
DMD-229ENST00000619831 PPP4R3BQ5MIZ7 849 aa5.39□□□□□ -1.55
DMD-229ENST00000619831 SMARCA2P51531 1590 aa5.39□□□□□ -1.55
DMD-229ENST00000619831 POLR3GO15318 223 aaPredicted RBP5.39□□□□□ -1.55
DMD-229ENST00000619831 PPARDQ03181 441 aa5.39□□□□□ -1.55
DMD-229ENST00000619831 HMOX1P09601 288 aa5.39□□□□□ -1.55
DMD-229ENST00000619831 STK3Q13188 491 aa5.39□□□□□ -1.55
DMD-229ENST00000619831 HSP90AB3PQ58FF7 597 aa5.39□□□□□ -1.55
DMD-229ENST00000619831 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.39□□□□□ -1.55
DMD-229ENST00000619831 V9GYY5 206 aaPredicted RBP5.39□□□□□ -1.55
DMD-229ENST00000619831 H3BQV1 296 aa5.38□□□□□ -1.55
DMD-229ENST00000619831 IFFO2Q5TF58 517 aa5.38□□□□□ -1.55
DMD-229ENST00000619831 TRAK1Q9UPV9 953 aa5.38□□□□□ -1.55
DMD-229ENST00000619831 ADAMTS8Q9UP79 889 aa5.38□□□□□ -1.55
DMD-229ENST00000619831 SMARCA5O60264 1052 aaPredicted RBP5.38□□□□□ -1.55
DMD-229ENST00000619831 RRP9O43818 475 aaKnown RBP5.38□□□□□ -1.55
DMD-229ENST00000619831 ESPNB1AK53 854 aa5.38□□□□□ -1.55
DMD-229ENST00000619831 BICD2Q8TD16 824 aa5.38□□□□□ -1.55
DMD-229ENST00000619831 KIF16BQ96L93 1317 aa5.38□□□□□ -1.55
DMD-229ENST00000619831 FHAD1B1AJZ9 1412 aa5.38□□□□□ -1.55
DMD-229ENST00000619831 FIBPO43427 364 aa5.38□□□□□ -1.55
DMD-229ENST00000619831 CAMK4Q16566 473 aa5.38□□□□□ -1.55
DMD-229ENST00000619831 GDPD2Q9HCC8 539 aa5.38□□□□□ -1.55
DMD-229ENST00000619831 KIF27Q86VH2 1401 aa5.38□□□□□ -1.55
DMD-229ENST00000619831 ST18O60284 1047 aa5.37□□□□□ -1.55
DMD-229ENST00000619831 CCDC173Q0VFZ6 552 aa5.37□□□□□ -1.55
DMD-229ENST00000619831 MCM4P33991 863 aa5.37□□□□□ -1.55
DMD-229ENST00000619831 MTERF4Q7Z6M4 381 aaKnown RBP5.37□□□□□ -1.55
DMD-229ENST00000619831 GOLGA6L19H0YKK7 550 aa5.37□□□□□ -1.55
DMD-229ENST00000619831 ZNF644Q9H582 1327 aaPredicted RBP5.37□□□□□ -1.55
DMD-229ENST00000619831 SMC2O95347 1197 aa5.37□□□□□ -1.55
DMD-229ENST00000619831 SKOR2Q2VWA4 1001 aaPredicted RBP5.37□□□□□ -1.55
DMD-229ENST00000619831 PRDM2Q13029 1718 aa5.36□□□□□ -1.55
DMD-229ENST00000619831 NLRP13Q86W25 1043 aa5.36□□□□□ -1.55
DMD-229ENST00000619831 IPO4Q8TEX9 1081 aaKnown RBP5.36□□□□□ -1.55
DMD-229ENST00000619831 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.36□□□□□ -1.55
DMD-229ENST00000619831 CHMP7Q8WUX9 453 aaPredicted RBP5.36□□□□□ -1.55
DMD-229ENST00000619831 PHF14O94880 888 aa5.36□□□□□ -1.55
DMD-229ENST00000619831 SF3A1Q15459 793 aaKnown RBP5.36□□□□□ -1.55
DMD-229ENST00000619831 RTF1Q92541 710 aaKnown RBP5.36□□□□□ -1.55
DMD-229ENST00000619831 TOMM22Q9NS69 142 aa5.36□□□□□ -1.55
DMD-229ENST00000619831 TNNQ9UQP3 1299 aa5.36□□□□□ -1.55
DMD-229ENST00000619831 PHLDB1Q86UU1 1377 aa5.36□□□□□ -1.55
DMD-229ENST00000619831 CSPP1Q1MSJ5 1256 aa5.36□□□□□ -1.55
DMD-229ENST00000619831 PCMTD1Q96MG8 357 aaPredicted RBP5.36□□□□□ -1.55
DMD-229ENST00000619831 SMARCA4P51532 1647 aa5.36□□□□□ -1.55
DMD-229ENST00000619831 EIF2S2P20042 333 aaKnown RBP5.36□□□□□ -1.55
DMD-229ENST00000619831 BECN2A8MW95 431 aa5.36□□□□□ -1.55
DMD-229ENST00000619831 RASSF8Q8NHQ8 419 aa5.35□□□□□ -1.55
DMD-229ENST00000619831 TRIM5Q9C035 493 aa5.35□□□□□ -1.55
DMD-229ENST00000619831 NOB1Q9ULX3 412 aaKnown RBP5.35□□□□□ -1.55
DMD-229ENST00000619831 IPO8O15397 1037 aaKnown RBP5.35□□□□□ -1.55
DMD-229ENST00000619831 BRPF1P55201 1214 aaPredicted RBP5.35□□□□□ -1.55
DMD-229ENST00000619831 CARMIL1Q5VZK9 1371 aa5.35□□□□□ -1.55
DMD-229ENST00000619831 FMN1Q68DA7 1419 aa5.35□□□□□ -1.55
DMD-229ENST00000619831 RRBP1Q9P2E9 1410 aaKnown RBP5.35□□□□□ -1.55
DMD-229ENST00000619831 NBPF8Q3BBV2 869 aa5.35□□□□□ -1.55
DMD-229ENST00000619831 AEBP2Q6ZN18 517 aaPredicted RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms