RNA–Protein interactions for RNA: ENST00000619121.4

CSMD2-210, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD2, Length 13,430 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-210ENST00000619121 EIF3DO15371 548 aaKnown RBP eCLIP8.78□□□□□ -1
CSMD2-210ENST00000619121 ATF3P18847 181 aa8.78□□□□□ -1
CSMD2-210ENST00000619121 NAT10Q9H0A0 1025 aaKnown RBP8.78□□□□□ -1
CSMD2-210ENST00000619121 PPP6R1Q9UPN7 881 aa8.78□□□□□ -1
CSMD2-210ENST00000619121 MEX3CQ5U5Q3 659 aaKnown RBP8.78□□□□□ -1
CSMD2-210ENST00000619121 MTERF4Q7Z6M4 381 aaKnown RBP8.78□□□□□ -1
CSMD2-210ENST00000619121 ERC2O15083 957 aa8.78□□□□□ -1
CSMD2-210ENST00000619121 ZNF428Q96B54 188 aa8.78□□□□□ -1
CSMD2-210ENST00000619121 VPS37DQ86XT2 251 aa8.77□□□□□ -1
CSMD2-210ENST00000619121 GAPVD1Q14C86 1478 aa8.77□□□□□ -1
CSMD2-210ENST00000619121 CT47B1P0C2W7 299 aaPredicted RBP8.77□□□□□ -1.01
CSMD2-210ENST00000619121 SAFBQ15424 915 aaKnown RBP eCLIP8.77□□□□□ -1.01
CSMD2-210ENST00000619121 FANCD2Q9BXW9 1451 aa8.77□□□□□ -1.01
CSMD2-210ENST00000619121 FAM184AQ8NB25 1140 aa8.77□□□□□ -1.01
CSMD2-210ENST00000619121 ODF2Q5BJF6 829 aa8.77□□□□□ -1.01
CSMD2-210ENST00000619121 NUP155O75694 1391 aa8.77□□□□□ -1.01
CSMD2-210ENST00000619121 SF3A1Q15459 793 aaKnown RBP8.76□□□□□ -1.01
CSMD2-210ENST00000619121 DMRT2Q9Y5R5 561 aa8.76□□□□□ -1.01
CSMD2-210ENST00000619121 FHOD3Q2V2M9 1422 aa8.76□□□□□ -1.01
CSMD2-210ENST00000619121 LETM1O95202 739 aaPredicted RBP8.76□□□□□ -1.01
CSMD2-210ENST00000619121 CALRP27797 417 aaKnown RBP8.76□□□□□ -1.01
CSMD2-210ENST00000619121 TEX35Q5T0J7 233 aa8.76□□□□□ -1.01
CSMD2-210ENST00000619121 H3BQV1 296 aa8.76□□□□□ -1.01
CSMD2-210ENST00000619121 IRX6P78412 446 aaPredicted RBP8.76□□□□□ -1.01
CSMD2-210ENST00000619121 IFFO2Q5TF58 517 aa8.76□□□□□ -1.01
CSMD2-210ENST00000619121 PNISRQ8TF01 805 aaKnown RBP8.75□□□□□ -1.01
CSMD2-210ENST00000619121 ERCC4Q92889 916 aaPredicted RBP8.75□□□□□ -1.01
CSMD2-210ENST00000619121 GPRASP1Q5JY77 1395 aa8.75□□□□□ -1.01
CSMD2-210ENST00000619121 GNL3LQ9NVN8 582 aaKnown RBP8.75□□□□□ -1.01
CSMD2-210ENST00000619121 NCOA2Q15596 1464 aa8.75□□□□□ -1.01
CSMD2-210ENST00000619121 JPH4Q96JJ6 628 aa8.75□□□□□ -1.01
CSMD2-210ENST00000619121 GGT6Q6P531 493 aa8.75□□□□□ -1.01
CSMD2-210ENST00000619121 TEFQ10587 303 aa8.75□□□□□ -1.01
CSMD2-210ENST00000619121 SALL2Q9Y467 1007 aaPredicted RBP8.74□□□□□ -1.01
CSMD2-210ENST00000619121 FRAT1Q92837 279 aaPredicted RBP8.74□□□□□ -1.01
CSMD2-210ENST00000619121 RBM33Q96EV2 1170 aaKnown RBP8.74□□□□□ -1.01
CSMD2-210ENST00000619121 CCDC9Q9Y3X0 531 aaKnown RBP8.74□□□□□ -1.01
CSMD2-210ENST00000619121 LRPPRCP42704 1394 aaKnown RBP8.74□□□□□ -1.01
CSMD2-210ENST00000619121 PTPRGP23470 1445 aa8.74□□□□□ -1.01
CSMD2-210ENST00000619121 CCDC112Q8NEF3 446 aa8.74□□□□□ -1.01
CSMD2-210ENST00000619121 PLCB2Q00722 1185 aa8.74□□□□□ -1.01
CSMD2-210ENST00000619121 CNKSR2Q8WXI2 1034 aa8.74□□□□□ -1.01
CSMD2-210ENST00000619121 CTTNBP2Q8WZ74 1663 aa8.74□□□□□ -1.01
CSMD2-210ENST00000619121 ERC1Q8IUD2 1116 aa8.74□□□□□ -1.01
CSMD2-210ENST00000619121 EHBP1L1Q8N3D4 1523 aa8.74□□□□□ -1.01
CSMD2-210ENST00000619121 DEF6Q9H4E7 631 aa8.73□□□□□ -1.01
CSMD2-210ENST00000619121 IFT140Q96RY7 1462 aa8.73□□□□□ -1.01
CSMD2-210ENST00000619121 HFM1A2PYH4 1435 aa8.73□□□□□ -1.01
CSMD2-210ENST00000619121 AK7Q96M32 723 aa8.73□□□□□ -1.01
CSMD2-210ENST00000619121 ZNF692Q9BU19 519 aaPredicted RBP8.73□□□□□ -1.01
CSMD2-210ENST00000619121 WDR97A6NE52 1622 aa8.73□□□□□ -1.01
CSMD2-210ENST00000619121 TXLNAP40222 546 aa8.73□□□□□ -1.01
CSMD2-210ENST00000619121 PPP4R3BQ5MIZ7 849 aa8.73□□□□□ -1.01
CSMD2-210ENST00000619121 GRIN2BQ13224 1484 aa8.73□□□□□ -1.01
CSMD2-210ENST00000619121 EPS15P42566 896 aa8.73□□□□□ -1.01
CSMD2-210ENST00000619121 C11orf95C9JLR9 678 aaPredicted RBP8.73□□□□□ -1.01
CSMD2-210ENST00000619121 RRP12Q5JTH9 1297 aaKnown RBP8.73□□□□□ -1.01
CSMD2-210ENST00000619121 PDCP20941 246 aa8.72□□□□□ -1.01
CSMD2-210ENST00000619121 ZSCAN25Q6NSZ9 544 aa8.72□□□□□ -1.01
CSMD2-210ENST00000619121 PSMA5P28066 241 aa8.72□□□□□ -1.01
CSMD2-210ENST00000619121 MPHOSPH6Q99547 160 aaKnown RBP8.72□□□□□ -1.01
CSMD2-210ENST00000619121 DDX19BQ9UMR2 479 aa8.72□□□□□ -1.01
CSMD2-210ENST00000619121 U2AF1L5P0DN76 240 aaPredicted RBP8.72□□□□□ -1.01
CSMD2-210ENST00000619121 U2AF1Q01081 240 aaKnown RBP eCLIP8.72□□□□□ -1.01
CSMD2-210ENST00000619121 TRAF1Q13077 416 aa8.72□□□□□ -1.01
CSMD2-210ENST00000619121 CAVIN1Q6NZI2 390 aaKnown RBP8.72□□□□□ -1.01
CSMD2-210ENST00000619121 SNAPC4Q5SXM2 1469 aa8.72□□□□□ -1.01
CSMD2-210ENST00000619121 ZNF710Q8N1W2 664 aa8.72□□□□□ -1.01
CSMD2-210ENST00000619121 CCAR1Q8IX12 1150 aaKnown RBP8.72□□□□□ -1.01
CSMD2-210ENST00000619121 SYNJ1O43426 1573 aa8.72□□□□□ -1.01
CSMD2-210ENST00000619121 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.72□□□□□ -1.01
CSMD2-210ENST00000619121 API5Q9BZZ5 524 aaKnown RBP8.71□□□□□ -1.01
CSMD2-210ENST00000619121 MROH2BQ7Z745 1585 aa8.71□□□□□ -1.01
CSMD2-210ENST00000619121 KIF14Q15058 1648 aa8.71□□□□□ -1.01
CSMD2-210ENST00000619121 NOM1Q5C9Z4 860 aaKnown RBP8.71□□□□□ -1.01
CSMD2-210ENST00000619121 GAS2L2Q8NHY3 880 aa8.71□□□□□ -1.01
CSMD2-210ENST00000619121 CFAP65Q6ZU64 1925 aaKnown RBP8.71□□□□□ -1.01
CSMD2-210ENST00000619121 IPO9Q96P70 1041 aaKnown RBP8.71□□□□□ -1.01
CSMD2-210ENST00000619121 NOP58Q9Y2X3 529 aaKnown RBP8.71□□□□□ -1.01
CSMD2-210ENST00000619121 TRIM6-TRIM34B2RNG4 842 aa8.71□□□□□ -1.02
CSMD2-210ENST00000619121 CHMP3Q9Y3E7 222 aa8.71□□□□□ -1.02
CSMD2-210ENST00000619121 TULP1O00294 542 aaPredicted RBP8.71□□□□□ -1.02
CSMD2-210ENST00000619121 CFAP74Q9C0B2 1584 aa8.71□□□□□ -1.02
CSMD2-210ENST00000619121 SLC52A1Q9NWF4 448 aa8.71□□□□□ -1.02
CSMD2-210ENST00000619121 CNTLNQ9NXG0 1405 aa8.7□□□□□ -1.02
CSMD2-210ENST00000619121 MPHOSPH9Q99550 1183 aa8.7□□□□□ -1.02
CSMD2-210ENST00000619121 KIF3BO15066 747 aa8.7□□□□□ -1.02
CSMD2-210ENST00000619121 CENPQQ7L2Z9 268 aaPredicted RBP8.7□□□□□ -1.02
CSMD2-210ENST00000619121 UNC13AQ9UPW8 1703 aa8.7□□□□□ -1.02
CSMD2-210ENST00000619121 RABEP1Q15276 862 aa8.7□□□□□ -1.02
CSMD2-210ENST00000619121 ARHGAP5Q13017 1502 aa8.7□□□□□ -1.02
CSMD2-210ENST00000619121 ANKRD1Q15327 319 aa8.69□□□□□ -1.02
CSMD2-210ENST00000619121 DACH1Q9UI36 760 aa8.69□□□□□ -1.02
CSMD2-210ENST00000619121 RCAN3Q9UKA8 241 aa8.69□□□□□ -1.02
CSMD2-210ENST00000619121 NUCB2P80303 420 aa8.69□□□□□ -1.02
CSMD2-210ENST00000619121 CCDC141Q6ZP82 1450 aa8.69□□□□□ -1.02
CSMD2-210ENST00000619121 SLF2Q8IX21 1173 aa8.69□□□□□ -1.02
CSMD2-210ENST00000619121 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.69□□□□□ -1.02
CSMD2-210ENST00000619121 C9orf78Q9NZ63 289 aaPredicted RBP8.69□□□□□ -1.02
CSMD2-210ENST00000619121 BECN2A8MW95 431 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms