RNA–Protein interactions for RNA: ENST00000617546.4

CUL4A-212, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 5,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-212ENST00000617546 ARAP1Q96P48 1450 aa12.55□□□□□ -0.4
CUL4A-212ENST00000617546 ESPNB1AK53 854 aa12.55□□□□□ -0.4
CUL4A-212ENST00000617546 BECN2A8MW95 431 aa12.54□□□□□ -0.4
CUL4A-212ENST00000617546 CDC45O75419 566 aa12.54□□□□□ -0.4
CUL4A-212ENST00000617546 CT47B1P0C2W7 299 aaPredicted RBP12.54□□□□□ -0.4
CUL4A-212ENST00000617546 AMER1Q5JTC6 1135 aaPredicted RBP12.54□□□□□ -0.4
CUL4A-212ENST00000617546 MAP3K1Q13233 1512 aa12.54□□□□□ -0.4
CUL4A-212ENST00000617546 RUFY2Q8WXA3 655 aa12.54□□□□□ -0.4
CUL4A-212ENST00000617546 ACBD3Q9H3P7 528 aa12.54□□□□□ -0.4
CUL4A-212ENST00000617546 AKNAQ7Z591 1439 aa12.54□□□□□ -0.4
CUL4A-212ENST00000617546 APAF1O14727 1248 aa12.53□□□□□ -0.4
CUL4A-212ENST00000617546 EFCAB2Q5VUJ9 269 aa12.53□□□□□ -0.4
CUL4A-212ENST00000617546 ZBTB7CA1YPR0 619 aa12.53□□□□□ -0.4
CUL4A-212ENST00000617546 WDR97A6NE52 1622 aa12.53□□□□□ -0.4
CUL4A-212ENST00000617546 RABEP1Q15276 862 aa12.53□□□□□ -0.4
CUL4A-212ENST00000617546 PNISRQ8TF01 805 aaKnown RBP12.53□□□□□ -0.4
CUL4A-212ENST00000617546 CCDC70Q6NSX1 233 aa12.52□□□□□ -0.4
CUL4A-212ENST00000617546 MCTP1Q6DN14 999 aa12.52□□□□□ -0.41
CUL4A-212ENST00000617546 CAVIN1Q6NZI2 390 aaKnown RBP12.52□□□□□ -0.41
CUL4A-212ENST00000617546 TIAM1Q13009 1591 aa12.52□□□□□ -0.41
CUL4A-212ENST00000617546 APBB1O00213 710 aa12.51□□□□□ -0.41
CUL4A-212ENST00000617546 MCM4P33991 863 aa12.51□□□□□ -0.41
CUL4A-212ENST00000617546 PDCL2Q8N4E4 241 aa12.51□□□□□ -0.41
CUL4A-212ENST00000617546 PDCL3Q9H2J4 239 aa12.51□□□□□ -0.41
CUL4A-212ENST00000617546 IGF1RP08069 1367 aa12.51□□□□□ -0.41
CUL4A-212ENST00000617546 TSPY26PQ9H489 355 aa12.51□□□□□ -0.41
CUL4A-212ENST00000617546 NCOA2Q15596 1464 aa12.51□□□□□ -0.41
CUL4A-212ENST00000617546 C11orf95C9JLR9 678 aaPredicted RBP12.51□□□□□ -0.41
CUL4A-212ENST00000617546 CCP110O43303 1012 aa12.51□□□□□ -0.41
CUL4A-212ENST00000617546 EHBP1L1Q8N3D4 1523 aa12.5□□□□□ -0.41
CUL4A-212ENST00000617546 ZSCAN30Q86W11 494 aa12.5□□□□□ -0.41
CUL4A-212ENST00000617546 TPM1P09493 284 aa12.5□□□□□ -0.41
CUL4A-212ENST00000617546 HSP90B1P14625 803 aaKnown RBP12.5□□□□□ -0.41
CUL4A-212ENST00000617546 PRXQ9BXM0 1461 aa12.49□□□□□ -0.41
CUL4A-212ENST00000617546 C14orf37Q86TY3 774 aa12.49□□□□□ -0.41
CUL4A-212ENST00000617546 GCC1Q96CN9 775 aa12.48□□□□□ -0.41
CUL4A-212ENST00000617546 H3BQV1 296 aa12.48□□□□□ -0.41
CUL4A-212ENST00000617546 IFFO2Q5TF58 517 aa12.48□□□□□ -0.41
CUL4A-212ENST00000617546 SF3A1Q15459 793 aaKnown RBP12.48□□□□□ -0.41
CUL4A-212ENST00000617546 SASS6Q6UVJ0 657 aa12.47□□□□□ -0.41
CUL4A-212ENST00000617546 FAM184AQ8NB25 1140 aa12.47□□□□□ -0.41
CUL4A-212ENST00000617546 CALRP27797 417 aaKnown RBP12.47□□□□□ -0.41
CUL4A-212ENST00000617546 MCM5P33992 734 aa12.47□□□□□ -0.41
CUL4A-212ENST00000617546 PDIA4P13667 645 aaKnown RBP12.47□□□□□ -0.41
CUL4A-212ENST00000617546 ZKSCAN1P17029 563 aaPredicted RBP12.47□□□□□ -0.41
CUL4A-212ENST00000617546 EVC2Q86UK5 1308 aa12.47□□□□□ -0.41
CUL4A-212ENST00000617546 NOC3LQ8WTT2 800 aaKnown RBP12.47□□□□□ -0.41
CUL4A-212ENST00000617546 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.47□□□□□ -0.41
CUL4A-212ENST00000617546 PODXL2Q9NZ53 605 aa12.46□□□□□ -0.41
CUL4A-212ENST00000617546 TSPYL1Q9H0U9 437 aa12.46□□□□□ -0.41
CUL4A-212ENST00000617546 NAT10Q9H0A0 1025 aaKnown RBP12.46□□□□□ -0.42
CUL4A-212ENST00000617546 PDZRN3Q9UPQ7 1066 aa12.45□□□□□ -0.42
CUL4A-212ENST00000617546 IFT57Q9NWB7 429 aa12.45□□□□□ -0.42
CUL4A-212ENST00000617546 HOOK1Q9UJC3 728 aaKnown RBP12.45□□□□□ -0.42
CUL4A-212ENST00000617546 SMC3Q9UQE7 1217 aa12.45□□□□□ -0.42
CUL4A-212ENST00000617546 RNF20Q5VTR2 975 aa12.45□□□□□ -0.42
CUL4A-212ENST00000617546 ERCC4Q92889 916 aaPredicted RBP12.45□□□□□ -0.42
CUL4A-212ENST00000617546 TSR1Q2NL82 804 aaKnown RBP12.44□□□□□ -0.42
CUL4A-212ENST00000617546 MNS1Q8NEH6 495 aa12.44□□□□□ -0.42
CUL4A-212ENST00000617546 UQCRHLA0A096LP55 91 aa12.44□□□□□ -0.42
CUL4A-212ENST00000617546 K7ELQ4 463 aaPredicted RBP12.44□□□□□ -0.42
CUL4A-212ENST00000617546 UQCRHP07919 91 aa12.44□□□□□ -0.42
CUL4A-212ENST00000617546 ZNF592Q92610 1267 aa12.44□□□□□ -0.42
CUL4A-212ENST00000617546 GNAI1P63096 354 aa12.44□□□□□ -0.42
CUL4A-212ENST00000617546 KIAA1107Q9UPP5 1409 aa12.44□□□□□ -0.42
CUL4A-212ENST00000617546 FOXD4L5Q5VV16 416 aaPredicted RBP12.43□□□□□ -0.42
CUL4A-212ENST00000617546 FOXD4L4Q8WXT5 416 aaPredicted RBP12.43□□□□□ -0.42
CUL4A-212ENST00000617546 HSP90AB4PQ58FF6 505 aa12.43□□□□□ -0.42
CUL4A-212ENST00000617546 NOL8Q76FK4 1167 aaKnown RBP12.43□□□□□ -0.42
CUL4A-212ENST00000617546 WDR63Q8IWG1 891 aa12.43□□□□□ -0.42
CUL4A-212ENST00000617546 ADAMTS8Q9UP79 889 aa12.43□□□□□ -0.42
CUL4A-212ENST00000617546 RRP7AQ9Y3A4 280 aaKnown RBP12.43□□□□□ -0.42
CUL4A-212ENST00000617546 LRRFIP1Q32MZ4 808 aaKnown RBP12.43□□□□□ -0.42
CUL4A-212ENST00000617546 TDRD9Q8NDG6 1382 aaKnown RBP12.42□□□□□ -0.42
CUL4A-212ENST00000617546 RILPL2Q969X0 211 aa12.42□□□□□ -0.42
CUL4A-212ENST00000617546 TOP2BQ02880 1626 aa12.42□□□□□ -0.42
CUL4A-212ENST00000617546 HOMER1Q86YM7 354 aa12.42□□□□□ -0.42
CUL4A-212ENST00000617546 BCL2L13Q9BXK5 485 aa12.42□□□□□ -0.42
CUL4A-212ENST00000617546 FGD5Q6ZNL6 1462 aa12.42□□□□□ -0.42
CUL4A-212ENST00000617546 DHX29Q7Z478 1369 aaKnown RBP12.42□□□□□ -0.42
CUL4A-212ENST00000617546 HSP90B2PQ58FF3 399 aa12.42□□□□□ -0.42
CUL4A-212ENST00000617546 ANKRD50Q9ULJ7 1429 aa12.42□□□□□ -0.42
CUL4A-212ENST00000617546 PANK1Q8TE04 598 aa12.41□□□□□ -0.42
CUL4A-212ENST00000617546 PPP2R1AP30153 589 aa12.41□□□□□ -0.42
CUL4A-212ENST00000617546 AK7Q96M32 723 aa12.41□□□□□ -0.42
CUL4A-212ENST00000617546 SYNJ1O43426 1573 aa12.41□□□□□ -0.42
CUL4A-212ENST00000617546 CLCN1P35523 988 aa12.41□□□□□ -0.42
CUL4A-212ENST00000617546 HNRNPMP52272 730 aaKnown RBP eCLIP12.41□□□□□ -0.421e-8■■■■■ 89.9
CUL4A-212ENST00000617546 DIAPH1O60610 1272 aaKnown RBP12.4□□□□□ -0.42
CUL4A-212ENST00000617546 PDCP20941 246 aa12.4□□□□□ -0.42
CUL4A-212ENST00000617546 TPD52L1Q16890 204 aaPredicted RBP12.4□□□□□ -0.42
CUL4A-212ENST00000617546 SLC4A10Q6U841 1118 aa12.4□□□□□ -0.42
CUL4A-212ENST00000617546 CCDC73Q6ZRK6 1079 aa12.4□□□□□ -0.42
CUL4A-212ENST00000617546 BICD2Q8TD16 824 aa12.4□□□□□ -0.42
CUL4A-212ENST00000617546 CDCA7LQ96GN5 454 aa12.4□□□□□ -0.42
CUL4A-212ENST00000617546 ZNF428Q96B54 188 aa12.4□□□□□ -0.43
CUL4A-212ENST00000617546 ANKRD20A12PQ8NF67 263 aa12.39□□□□□ -0.43
CUL4A-212ENST00000617546 LNPKQ9C0E8 428 aa12.39□□□□□ -0.43
CUL4A-212ENST00000617546 AQRO60306 1485 aaKnown RBP eCLIP12.39□□□□□ -0.434e-6■■■□□ 15.2
CUL4A-212ENST00000617546 NCOA1Q15788 1441 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms