RNA–Protein interactions for RNA: ENST00000613524.4

SYCP1-209, Transcript of synaptonemal complex protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYCP1, Length 3,034 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-209ENST00000613524 KDM5CP41229 1560 aa7.26□□□□□ -1.25
SYCP1-209ENST00000613524 STK24Q9Y6E0 443 aa7.26□□□□□ -1.25
SYCP1-209ENST00000613524 BCORL1Q5H9F3 1711 aa7.26□□□□□ -1.25
SYCP1-209ENST00000613524 CLTCQ00610 1675 aaKnown RBP7.26□□□□□ -1.25
SYCP1-209ENST00000613524 NCOA1Q15788 1441 aa7.26□□□□□ -1.25
SYCP1-209ENST00000613524 ZC3H15Q8WU90 426 aaKnown RBP7.26□□□□□ -1.25
SYCP1-209ENST00000613524 PIP4K2BP78356 416 aa7.25□□□□□ -1.25
SYCP1-209ENST00000613524 IDI1Q13907 227 aa7.25□□□□□ -1.25
SYCP1-209ENST00000613524 ZMYM4Q5VZL5 1548 aa7.25□□□□□ -1.25
SYCP1-209ENST00000613524 UHRF1BP1Q6BDS2 1440 aa7.25□□□□□ -1.25
SYCP1-209ENST00000613524 TXNDC2Q86VQ3 553 aa7.25□□□□□ -1.25
SYCP1-209ENST00000613524 IL27Q8NEV9 243 aa7.25□□□□□ -1.25
SYCP1-209ENST00000613524 MAP3K1Q13233 1512 aa7.25□□□□□ -1.25
SYCP1-209ENST00000613524 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.24□□□□□ -1.25
SYCP1-209ENST00000613524 ZFP91Q96JP5 570 aaPredicted RBP7.24□□□□□ -1.25
SYCP1-209ENST00000613524 ZNF335Q9H4Z2 1342 aaPredicted RBP7.24□□□□□ -1.25
SYCP1-209ENST00000613524 TNRQ92752 1358 aa7.23□□□□□ -1.25
SYCP1-209ENST00000613524 INO80Q9ULG1 1556 aaPredicted RBP7.23□□□□□ -1.25
SYCP1-209ENST00000613524 NUTM2FA1L443 756 aa7.22□□□□□ -1.25
SYCP1-209ENST00000613524 SAFB2Q14151 953 aaKnown RBP eCLIP7.22□□□□□ -1.25
SYCP1-209ENST00000613524 DNMT1P26358 1616 aaKnown RBP7.22□□□□□ -1.25
SYCP1-209ENST00000613524 STK26Q9P289 416 aa7.22□□□□□ -1.25
SYCP1-209ENST00000613524 UGGT1Q9NYU2 1555 aa7.21□□□□□ -1.25
SYCP1-209ENST00000613524 ADAMTSL3P82987 1691 aa7.21□□□□□ -1.25
SYCP1-209ENST00000613524 ADGBQ8N7X0 1667 aa7.21□□□□□ -1.25
SYCP1-209ENST00000613524 RTEL1-TNFRSF6BF6WH68 1400 aa7.21□□□□□ -1.26
SYCP1-209ENST00000613524 CEP152O94986 1710 aa7.21□□□□□ -1.26
SYCP1-209ENST00000613524 LTKP29376 864 aa7.21□□□□□ -1.26
SYCP1-209ENST00000613524 RIOK3O14730 519 aaKnown RBP7.2□□□□□ -1.26
SYCP1-209ENST00000613524 PYGBP11216 843 aa7.2□□□□□ -1.26
SYCP1-209ENST00000613524 ANKLE2Q86XL3 938 aa7.2□□□□□ -1.26
SYCP1-209ENST00000613524 DUOX2Q9NRD8 1548 aa7.2□□□□□ -1.26
SYCP1-209ENST00000613524 LMTK3Q96Q04 1460 aa7.2□□□□□ -1.26
SYCP1-209ENST00000613524 RAB3GAP2Q9H2M9 1393 aa7.2□□□□□ -1.26
SYCP1-209ENST00000613524 DCAF8Q5TAQ9 597 aa7.2□□□□□ -1.26
SYCP1-209ENST00000613524 THEMISQ8N1K5 641 aaPredicted RBP7.2□□□□□ -1.26
SYCP1-209ENST00000613524 MPHOSPH9Q99550 1183 aa7.2□□□□□ -1.26
SYCP1-209ENST00000613524 EID1Q9Y6B2 187 aa7.2□□□□□ -1.26
SYCP1-209ENST00000613524 C3P01024 1663 aa7.2□□□□□ -1.26
SYCP1-209ENST00000613524 ARHGEF5Q12774 1597 aa7.2□□□□□ -1.26
SYCP1-209ENST00000613524 TCOF1Q13428 1488 aaKnown RBP7.19□□□□□ -1.26
SYCP1-209ENST00000613524 NPATQ14207 1427 aa7.19□□□□□ -1.26
SYCP1-209ENST00000613524 ILDR1Q86SU0 546 aaPredicted RBP7.19□□□□□ -1.26
SYCP1-209ENST00000613524 SIN3AQ96ST3 1273 aa7.19□□□□□ -1.26
SYCP1-209ENST00000613524 NAIPQ13075 1403 aa7.19□□□□□ -1.26
SYCP1-209ENST00000613524 RRBP1Q9P2E9 1410 aaKnown RBP7.18□□□□□ -1.26
SYCP1-209ENST00000613524 UBAP1LF5GYI3 381 aa7.18□□□□□ -1.26
SYCP1-209ENST00000613524 NECTIN2Q92692 538 aa7.18□□□□□ -1.26
SYCP1-209ENST00000613524 SRCAPQ6ZRS2 3230 aa7.17□□□□□ -1.26
SYCP1-209ENST00000613524 ABCC3O15438 1527 aa7.17□□□□□ -1.26
SYCP1-209ENST00000613524 CNTLNQ9NXG0 1405 aa7.17□□□□□ -1.26
SYCP1-209ENST00000613524 KDM5DQ9BY66 1539 aa7.17□□□□□ -1.26
SYCP1-209ENST00000613524 CAMSAP1Q5T5Y3 1602 aa7.17□□□□□ -1.26
SYCP1-209ENST00000613524 TMEM132EQ6IEE7 984 aa7.17□□□□□ -1.26
SYCP1-209ENST00000613524 SP7Q8TDD2 431 aaPredicted RBP7.17□□□□□ -1.26
SYCP1-209ENST00000613524 SETD1BQ9UPS6 1966 aaKnown RBP7.16□□□□□ -1.26
SYCP1-209ENST00000613524 PLXNC1O60486 1568 aa7.16□□□□□ -1.26
SYCP1-209ENST00000613524 ERBINQ96RT1 1412 aa7.16□□□□□ -1.26
SYCP1-209ENST00000613524 ZEB1P37275 1124 aaPredicted RBP7.16□□□□□ -1.26
SYCP1-209ENST00000613524 NUBP1P53384 320 aa7.16□□□□□ -1.26
SYCP1-209ENST00000613524 CROCC2H7BZ55 1655 aa7.15□□□□□ -1.26
SYCP1-209ENST00000613524 SETD5Q9C0A6 1442 aa7.15□□□□□ -1.26
SYCP1-209ENST00000613524 AGLP35573 1532 aa7.15□□□□□ -1.26
SYCP1-209ENST00000613524 CCER1Q8TC90 406 aaPredicted RBP7.15□□□□□ -1.27
SYCP1-209ENST00000613524 SHANK2Q9UPX8 1470 aa7.15□□□□□ -1.27
SYCP1-209ENST00000613524 FAM135AQ9P2D6 1515 aa7.15□□□□□ -1.27
SYCP1-209ENST00000613524 PROSER2Q86WR7 435 aaPredicted RBP7.14□□□□□ -1.27
SYCP1-209ENST00000613524 DCAF11Q8TEB1 546 aa7.14□□□□□ -1.27
SYCP1-209ENST00000613524 SSUH2Q9Y2M2 353 aa7.14□□□□□ -1.27
SYCP1-209ENST00000613524 MKRN3Q13064 507 aaKnown RBP7.14□□□□□ -1.27
SYCP1-209ENST00000613524 RASEFQ8IZ41 740 aa7.14□□□□□ -1.27
SYCP1-209ENST00000613524 ERVK-7P63135 1459 aa7.14□□□□□ -1.27
SYCP1-209ENST00000613524 PRDM15P57071 1507 aaPredicted RBP7.14□□□□□ -1.27
SYCP1-209ENST00000613524 PPP1R37O75864 691 aa7.13□□□□□ -1.27
SYCP1-209ENST00000613524 HIRIP3Q9BW71 556 aaPredicted RBP7.13□□□□□ -1.27
SYCP1-209ENST00000613524 PZPP20742 1482 aa7.13□□□□□ -1.27
SYCP1-209ENST00000613524 CNGB1Q14028 1251 aaPredicted RBP7.13□□□□□ -1.27
SYCP1-209ENST00000613524 CERKQ8TCT0 537 aa7.13□□□□□ -1.27
SYCP1-209ENST00000613524 ROCK1Q13464 1354 aa7.12□□□□□ -1.27
SYCP1-209ENST00000613524 POLR3GLQ9BT43 218 aa7.12□□□□□ -1.27
SYCP1-209ENST00000613524 CEP170BQ9Y4F5 1589 aaPredicted RBP7.12□□□□□ -1.27
SYCP1-209ENST00000613524 MROH1Q8NDA8 1641 aa7.12□□□□□ -1.27
SYCP1-209ENST00000613524 HFM1A2PYH4 1435 aa7.12□□□□□ -1.27
SYCP1-209ENST00000613524 APBB1O00213 710 aa7.12□□□□□ -1.27
SYCP1-209ENST00000613524 ADGRL2O95490 1459 aa7.12□□□□□ -1.27
SYCP1-209ENST00000613524 ZNF428Q96B54 188 aa7.11□□□□□ -1.27
SYCP1-209ENST00000613524 SLC52A1Q9NWF4 448 aa7.11□□□□□ -1.27
SYCP1-209ENST00000613524 MAST1Q9Y2H9 1570 aa7.11□□□□□ -1.27
SYCP1-209ENST00000613524 KCNA6P17658 529 aa7.11□□□□□ -1.27
SYCP1-209ENST00000613524 XPCQ01831 940 aaPredicted RBP7.11□□□□□ -1.27
SYCP1-209ENST00000613524 ERICH6Q7L0X2 663 aa7.11□□□□□ -1.27
SYCP1-209ENST00000613524 MYO3AQ8NEV4 1616 aa7.11□□□□□ -1.27
SYCP1-209ENST00000613524 DDX17Q92841 729 aaKnown RBP7.11□□□□□ -1.27
SYCP1-209ENST00000613524 CCDC144AA2RUR9 1427 aa7.1□□□□□ -1.27
SYCP1-209ENST00000613524 ADGRF5Q8IZF2 1346 aa7.1□□□□□ -1.27
SYCP1-209ENST00000613524 PREX1Q8TCU6 1659 aa7.1□□□□□ -1.27
SYCP1-209ENST00000613524 CFAP70Q5T0N1 1121 aa7.1□□□□□ -1.27
SYCP1-209ENST00000613524 WAPLQ7Z5K2 1190 aa7.1□□□□□ -1.27
SYCP1-209ENST00000613524 TRAK1Q9UPV9 953 aa7.1□□□□□ -1.27
SYCP1-209ENST00000613524 A2ML1A8K2U0 1454 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms