RNA–Protein interactions for RNA: ENST00000613214.4

TNXB-209, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-209ENST00000613214 HMOX1P09601 288 aa18.95■□□□□ 0.62
TNXB-209ENST00000613214 LMOD3Q0VAK6 560 aa18.95■□□□□ 0.62
TNXB-209ENST00000613214 COG6Q9Y2V7 657 aa18.94■□□□□ 0.62
TNXB-209ENST00000613214 DDX49Q9Y6V7 483 aaKnown RBP18.94■□□□□ 0.62
TNXB-209ENST00000613214 CPLX1O14810 134 aa18.94■□□□□ 0.62
TNXB-209ENST00000613214 PAF1Q8N7H5 531 aa18.94■□□□□ 0.62
TNXB-209ENST00000613214 TDRD9Q8NDG6 1382 aaKnown RBP18.93■□□□□ 0.62
TNXB-209ENST00000613214 TPM1P09493 284 aa18.93■□□□□ 0.62
TNXB-209ENST00000613214 CT47A1Q5JQC4 288 aaPredicted RBP18.93■□□□□ 0.62
TNXB-209ENST00000613214 NUTM2BA6NNL0 878 aaPredicted RBP18.93■□□□□ 0.62
TNXB-209ENST00000613214 NUTM2EB1AL46 878 aaPredicted RBP18.93■□□□□ 0.62
TNXB-209ENST00000613214 PHF14O94880 888 aa18.93■□□□□ 0.62
TNXB-209ENST00000613214 NUTM2AQ8IVF1 878 aaPredicted RBP18.93■□□□□ 0.62
TNXB-209ENST00000613214 HDAC5Q9UQL6 1122 aa18.93■□□□□ 0.62
TNXB-209ENST00000613214 SOGA1O94964 1423 aa18.92■□□□□ 0.62
TNXB-209ENST00000613214 BICD2Q8TD16 824 aa18.91■□□□□ 0.62
TNXB-209ENST00000613214 DHX37Q8IY37 1157 aaKnown RBP18.91■□□□□ 0.62
TNXB-209ENST00000613214 KIF3AQ9Y496 699 aa18.91■□□□□ 0.62
TNXB-209ENST00000613214 TNIKQ9UKE5 1360 aa18.91■□□□□ 0.62
TNXB-209ENST00000613214 FHAD1B1AJZ9 1412 aa18.91■□□□□ 0.62
TNXB-209ENST00000613214 VPS37CA5D8V6 355 aaPredicted RBP18.91■□□□□ 0.62
TNXB-209ENST00000613214 WASHC4Q2M389 1173 aa18.91■□□□□ 0.62
TNXB-209ENST00000613214 ODF2Q5BJF6 829 aa18.91■□□□□ 0.62
TNXB-209ENST00000613214 ERICH2A1L162 156 aa18.9■□□□□ 0.62
TNXB-209ENST00000613214 CCAR1Q8IX12 1150 aaKnown RBP18.9■□□□□ 0.62
TNXB-209ENST00000613214 CRBNQ96SW2 442 aa18.9■□□□□ 0.62
TNXB-209ENST00000613214 L3MBTL2Q969R5 705 aa18.89■□□□□ 0.62
TNXB-209ENST00000613214 ATP2B2Q01814 1243 aa18.89■□□□□ 0.61
TNXB-209ENST00000613214 FKBP5Q13451 457 aaPredicted RBP18.89■□□□□ 0.61
TNXB-209ENST00000613214 HOMER1Q86YM7 354 aa18.88■□□□□ 0.61
TNXB-209ENST00000613214 CARMIL2Q6F5E8 1435 aa18.88■□□□□ 0.61
TNXB-209ENST00000613214 SETQ01105 290 aaPredicted RBP18.88■□□□□ 0.61
TNXB-209ENST00000613214 STRN4Q9NRL3 753 aa18.88■□□□□ 0.61
TNXB-209ENST00000613214 TRDNQ13061 729 aa18.87■□□□□ 0.61
TNXB-209ENST00000613214 RIC3Q7Z5B4 369 aa18.87■□□□□ 0.61
TNXB-209ENST00000613214 ATP2B1P20020 1258 aa18.87■□□□□ 0.61
TNXB-209ENST00000613214 ANKRD30AQ9BXX3 1397 aa18.86■□□□□ 0.61
TNXB-209ENST00000613214 RAB3GAP2Q9H2M9 1393 aa18.86■□□□□ 0.61
TNXB-209ENST00000613214 CHMP4AQ9BY43 222 aa18.86■□□□□ 0.61
TNXB-209ENST00000613214 FAM161AQ3B820 660 aa18.86■□□□□ 0.61
TNXB-209ENST00000613214 VSIG10Q8N0Z9 540 aa18.86■□□□□ 0.61
TNXB-209ENST00000613214 NLRP2Q9NX02 1062 aa18.85■□□□□ 0.61
TNXB-209ENST00000613214 ST20-MTHFSA0A0A6YYL1 179 aa18.85■□□□□ 0.61
TNXB-209ENST00000613214 CCER2I3L3R5 266 aa18.85■□□□□ 0.61
TNXB-209ENST00000613214 R3HCC1Q9Y3T6 440 aaKnown RBP18.85■□□□□ 0.61
TNXB-209ENST00000613214 G3BP1Q13283 466 aaKnown RBP eCLIP18.85■□□□□ 0.61
TNXB-209ENST00000613214 EXOC6Q8TAG9 804 aa18.85■□□□□ 0.61
TNXB-209ENST00000613214 RBM42Q9BTD8 480 aaKnown RBP18.85■□□□□ 0.61
TNXB-209ENST00000613214 HSP90AB2PQ58FF8 381 aa18.85■□□□□ 0.61
TNXB-209ENST00000613214 EPS15P42566 896 aa18.85■□□□□ 0.61
TNXB-209ENST00000613214 IPO9Q96P70 1041 aaKnown RBP18.85■□□□□ 0.61
TNXB-209ENST00000613214 ZNF771Q7L3S4 317 aaPredicted RBP18.84■□□□□ 0.61
TNXB-209ENST00000613214 CCDC70Q6NSX1 233 aa18.84■□□□□ 0.61
TNXB-209ENST00000613214 CECR2Q9BXF3 1484 aa18.84■□□□□ 0.61
TNXB-209ENST00000613214 RRP12Q5JTH9 1297 aaKnown RBP18.83■□□□□ 0.61
TNXB-209ENST00000613214 PDILTQ8N807 584 aa18.83■□□□□ 0.61
TNXB-209ENST00000613214 ABCC8Q09428 1581 aa18.83■□□□□ 0.61
TNXB-209ENST00000613214 ATF3P18847 181 aa18.83■□□□□ 0.61
TNXB-209ENST00000613214 RIPK4P57078 832 aa18.83■□□□□ 0.61
TNXB-209ENST00000613214 CCDC47Q96A33 483 aaKnown RBP18.83■□□□□ 0.6
TNXB-209ENST00000613214 PIP4K2BP78356 416 aa18.83■□□□□ 0.6
TNXB-209ENST00000613214 TSPYL4Q9UJ04 414 aa18.83■□□□□ 0.6
TNXB-209ENST00000613214 CPLX2Q6PUV4 134 aaKnown RBP18.81■□□□□ 0.6
TNXB-209ENST00000613214 APAF1O14727 1248 aa18.81■□□□□ 0.6
TNXB-209ENST00000613214 IPO7O95373 1038 aaKnown RBP18.81■□□□□ 0.6
TNXB-209ENST00000613214 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.8■□□□□ 0.6
TNXB-209ENST00000613214 DNAJC2Q99543 621 aaKnown RBP18.8■□□□□ 0.6
TNXB-209ENST00000613214 ZKSCAN2Q63HK3 967 aa18.79■□□□□ 0.6
TNXB-209ENST00000613214 CHMP4BP1P59074 171 aa18.79■□□□□ 0.6
TNXB-209ENST00000613214 ZKSCAN1P17029 563 aaPredicted RBP18.78■□□□□ 0.6
TNXB-209ENST00000613214 BRPF1P55201 1214 aaPredicted RBP18.78■□□□□ 0.6
TNXB-209ENST00000613214 ANKRD20A12PQ8NF67 263 aa18.77■□□□□ 0.6
TNXB-209ENST00000613214 SPINK5Q9NQ38 1064 aaPredicted RBP18.77■□□□□ 0.6
TNXB-209ENST00000613214 RBM5P52756 815 aaKnown RBP eCLIP18.77■□□□□ 0.59
TNXB-209ENST00000613214 RAPGEF4Q8WZA2 1011 aa18.77■□□□□ 0.59
TNXB-209ENST00000613214 DDX58O95786 925 aaKnown RBP18.76■□□□□ 0.59
TNXB-209ENST00000613214 CEBPZQ03701 1054 aaKnown RBP18.76■□□□□ 0.59
TNXB-209ENST00000613214 RUFY2Q8WXA3 655 aa18.76■□□□□ 0.59
TNXB-209ENST00000613214 CGNL1Q0VF96 1302 aa18.76■□□□□ 0.59
TNXB-209ENST00000613214 TIMELESSQ9UNS1 1208 aa18.76■□□□□ 0.59
TNXB-209ENST00000613214 EVC2Q86UK5 1308 aa18.75■□□□□ 0.59
TNXB-209ENST00000613214 DDX11L8A8MPP1 907 aa18.75■□□□□ 0.59
TNXB-209ENST00000613214 LNPKQ9C0E8 428 aa18.75■□□□□ 0.59
TNXB-209ENST00000613214 DIAPH1O60610 1272 aaKnown RBP18.75■□□□□ 0.59
TNXB-209ENST00000613214 NLRP13Q86W25 1043 aa18.75■□□□□ 0.59
TNXB-209ENST00000613214 LRRFIP1Q32MZ4 808 aaKnown RBP18.74■□□□□ 0.59
TNXB-209ENST00000613214 MAP4K4O95819 1239 aaPredicted RBP18.74■□□□□ 0.59
TNXB-209ENST00000613214 CABP2Q9NPB3 220 aa18.73■□□□□ 0.59
TNXB-209ENST00000613214 SMC3Q9UQE7 1217 aa18.73■□□□□ 0.59
TNXB-209ENST00000613214 FHOD3Q2V2M9 1422 aa18.73■□□□□ 0.59
TNXB-209ENST00000613214 RALYLQ86SE5 291 aaKnown RBP18.73■□□□□ 0.59
TNXB-209ENST00000613214 HSP90AA2PQ14568 343 aaPredicted RBP18.73■□□□□ 0.59
TNXB-209ENST00000613214 SASS6Q6UVJ0 657 aa18.73■□□□□ 0.59
TNXB-209ENST00000613214 OFD1O75665 1012 aa18.72■□□□□ 0.59
TNXB-209ENST00000613214 PIBF1Q8WXW3 757 aa18.72■□□□□ 0.59
TNXB-209ENST00000613214 ZHX3Q9H4I2 956 aa18.72■□□□□ 0.59
TNXB-209ENST00000613214 RUFY1Q96T51 708 aa18.72■□□□□ 0.59
TNXB-209ENST00000613214 FAM13BQ9NYF5 915 aa18.72■□□□□ 0.59
TNXB-209ENST00000613214 GGNBP2Q9H3C7 697 aa18.71■□□□□ 0.59
TNXB-209ENST00000613214 MYCNP04198 464 aaPredicted RBP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms