RNA–Protein interactions for RNA: ENST00000610356.4

RDH13-223, Transcript of retinol dehydrogenase 13, humanhuman

TSL 1 (best) BASIC

Gene RDH13, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-223ENST00000610356 CHGAP10645 457 aaKnown RBP23.51■■□□□ 1.35
RDH13-223ENST00000610356 SCAF11Q99590 1463 aaKnown RBP23.5■■□□□ 1.35
RDH13-223ENST00000610356 NRXN1Q9ULB1 1477 aa23.5■■□□□ 1.35
RDH13-223ENST00000610356 TESK2Q96S53 571 aa23.48■■□□□ 1.35
RDH13-223ENST00000610356 PPLO60437 1756 aa23.48■■□□□ 1.35
RDH13-223ENST00000610356 ADGRF5Q8IZF2 1346 aa23.47■■□□□ 1.35
RDH13-223ENST00000610356 PREX1Q8TCU6 1659 aa23.47■■□□□ 1.35
RDH13-223ENST00000610356 RPGRIP1LQ68CZ1 1315 aa23.46■■□□□ 1.35
RDH13-223ENST00000610356 PPP6R1Q9UPN7 881 aa23.46■■□□□ 1.35
RDH13-223ENST00000610356 EIF3AQ14152 1382 aaKnown RBP23.44■■□□□ 1.34
RDH13-223ENST00000610356 DISP3Q9P2K9 1392 aa23.44■■□□□ 1.34
RDH13-223ENST00000610356 TMF1P82094 1093 aa23.44■■□□□ 1.34
RDH13-223ENST00000610356 SLC52A1Q9NWF4 448 aa23.42■■□□□ 1.34
RDH13-223ENST00000610356 CFAP70Q5T0N1 1121 aa23.41■■□□□ 1.34
RDH13-223ENST00000610356 PIK3C2GO75747 1445 aa23.4■■□□□ 1.34
RDH13-223ENST00000610356 SETBP1Q9Y6X0 1596 aa23.4■■□□□ 1.34
RDH13-223ENST00000610356 CLTCQ00610 1675 aaKnown RBP23.39■■□□□ 1.34
RDH13-223ENST00000610356 ERVK-7P63135 1459 aa23.38■■□□□ 1.33
RDH13-223ENST00000610356 NEXMIFQ5QGS0 1516 aa23.38■■□□□ 1.33
RDH13-223ENST00000610356 IDI1Q13907 227 aa23.37■■□□□ 1.33
RDH13-223ENST00000610356 MRS2Q9HD23 443 aa23.34■■□□□ 1.33
RDH13-223ENST00000610356 TMEM131LA2VDJ0 1609 aa23.33■■□□□ 1.33
RDH13-223ENST00000610356 CCDC184Q52MB2 194 aa23.33■■□□□ 1.32
RDH13-223ENST00000610356 CDCA8Q53HL2 280 aa23.33■■□□□ 1.32
RDH13-223ENST00000610356 KTN1Q86UP2 1357 aaKnown RBP23.33■■□□□ 1.32
RDH13-223ENST00000610356 VGFO15240 615 aaPredicted RBP23.32■■□□□ 1.32
RDH13-223ENST00000610356 C14orf93Q9H972 538 aaKnown RBP23.32■■□□□ 1.32
RDH13-223ENST00000610356 MYO3AQ8NEV4 1616 aa23.32■■□□□ 1.32
RDH13-223ENST00000610356 MLECQ14165 292 aa23.31■■□□□ 1.32
RDH13-223ENST00000610356 FBXO31Q5XUX0 539 aaPredicted RBP23.31■■□□□ 1.32
RDH13-223ENST00000610356 SPATA31D1Q6ZQQ2 1576 aa23.3■■□□□ 1.32
RDH13-223ENST00000610356 SLC24A1O60721 1099 aa23.3■■□□□ 1.32
RDH13-223ENST00000610356 ADGRB1O14514 1584 aa23.3■■□□□ 1.32
RDH13-223ENST00000610356 ZFYVE9O95405 1425 aa23.3■■□□□ 1.32
RDH13-223ENST00000610356 MYO5BQ9ULV0 1848 aa23.29■■□□□ 1.32
RDH13-223ENST00000610356 CNGB1Q14028 1251 aaPredicted RBP23.29■■□□□ 1.32
RDH13-223ENST00000610356 RALBP1Q15311 655 aa23.27■■□□□ 1.32
RDH13-223ENST00000610356 KDM5AP29375 1690 aaKnown RBP23.26■■□□□ 1.31
RDH13-223ENST00000610356 ESF1Q9H501 851 aaKnown RBP23.25■■□□□ 1.31
RDH13-223ENST00000610356 SBNO2Q9Y2G9 1366 aa23.25■■□□□ 1.31
RDH13-223ENST00000610356 SUPT16HQ9Y5B9 1047 aaKnown RBP23.25■■□□□ 1.31
RDH13-223ENST00000610356 PER1O15534 1290 aaPredicted RBP23.24■■□□□ 1.31
RDH13-223ENST00000610356 HNRNPUQ00839 825 aaKnown RBP eCLIP23.24■■□□□ 1.31
RDH13-223ENST00000610356 PANK3Q9H999 370 aa23.23■■□□□ 1.31
RDH13-223ENST00000610356 NUTM2DQ5VT03 806 aaPredicted RBP23.23■■□□□ 1.31
RDH13-223ENST00000610356 FAM9BQ8IZU0 186 aa23.22■■□□□ 1.31
RDH13-223ENST00000610356 MYBBP1AQ9BQG0 1328 aaKnown RBP23.22■■□□□ 1.31
RDH13-223ENST00000610356 CENPJQ9HC77 1338 aaPredicted RBP23.22■■□□□ 1.31
RDH13-223ENST00000610356 PARD3Q8TEW0 1356 aa23.21■■□□□ 1.31
RDH13-223ENST00000610356 STAG3Q9UJ98 1225 aa23.21■■□□□ 1.31
RDH13-223ENST00000610356 MYOM1P52179 1685 aa23.21■■□□□ 1.31
RDH13-223ENST00000610356 TRAK1Q9UPV9 953 aa23.2■■□□□ 1.3
RDH13-223ENST00000610356 QRICH2Q9H0J4 1663 aa23.19■■□□□ 1.3
RDH13-223ENST00000610356 ZMYM3Q14202 1370 aa23.19■■□□□ 1.3
RDH13-223ENST00000610356 TMEM132EQ6IEE7 984 aa23.19■■□□□ 1.3
RDH13-223ENST00000610356 BRD4O60885 1362 aaPredicted RBP23.18■■□□□ 1.3
RDH13-223ENST00000610356 A2ML1A8K2U0 1454 aa23.16■■□□□ 1.3
RDH13-223ENST00000610356 ARHGEF28Q8N1W1 1705 aaKnown RBP23.16■■□□□ 1.3
RDH13-223ENST00000610356 TRHP20396 242 aaPredicted RBP23.16■■□□□ 1.3
RDH13-223ENST00000610356 TMC1Q8TDI8 760 aa23.16■■□□□ 1.3
RDH13-223ENST00000610356 ASXL1Q8IXJ9 1541 aa23.14■■□□□ 1.29
RDH13-223ENST00000610356 KNSTRNQ9Y448 316 aa23.12■■□□□ 1.29
RDH13-223ENST00000610356 CC2D1BQ5T0F9 858 aaKnown RBP23.12■■□□□ 1.29
RDH13-223ENST00000610356 NLRP13Q86W25 1043 aa23.12■■□□□ 1.29
RDH13-223ENST00000610356 RIMS2Q9UQ26 1411 aa23.1■■□□□ 1.29
RDH13-223ENST00000610356 TNRQ92752 1358 aa23.09■■□□□ 1.29
RDH13-223ENST00000610356 PNISRQ8TF01 805 aaKnown RBP23.09■■□□□ 1.29
RDH13-223ENST00000610356 ALKQ9UM73 1620 aa23.08■■□□□ 1.29
RDH13-223ENST00000610356 ZBED9Q6R2W3 1325 aa23.07■■□□□ 1.28
RDH13-223ENST00000610356 YTHDC2Q9H6S0 1430 aaKnown RBP23.05■■□□□ 1.28
RDH13-223ENST00000610356 NPC1L1Q9UHC9 1359 aa23.04■■□□□ 1.28
RDH13-223ENST00000610356 AMER1Q5JTC6 1135 aaPredicted RBP23.04■■□□□ 1.28
RDH13-223ENST00000610356 LRPPRCP42704 1394 aaKnown RBP23.04■■□□□ 1.28
RDH13-223ENST00000610356 SENP3Q9H4L4 574 aaPredicted RBP23.03■■□□□ 1.28
RDH13-223ENST00000610356 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.02■■□□□ 1.28
RDH13-223ENST00000610356 EVC2Q86UK5 1308 aa23.02■■□□□ 1.28
RDH13-223ENST00000610356 TULP4Q9NRJ4 1543 aa23.02■■□□□ 1.28
RDH13-223ENST00000610356 STK26Q9P289 416 aa23.02■■□□□ 1.28
RDH13-223ENST00000610356 PTPRMP28827 1452 aa23.02■■□□□ 1.27
RDH13-223ENST00000610356 PUS7Q96PZ0 661 aaKnown RBP23.01■■□□□ 1.27
RDH13-223ENST00000610356 UBR1Q8IWV7 1749 aa22.99■■□□□ 1.27
RDH13-223ENST00000610356 SETD1AO15047 1707 aaKnown RBP22.99■■□□□ 1.27
RDH13-223ENST00000610356 FER1L4A9Z1Z3 1794 aa22.98■■□□□ 1.27
RDH13-223ENST00000610356 HDGFP51858 240 aaKnown RBP22.98■■□□□ 1.27
RDH13-223ENST00000610356 NLRP1Q9C000 1473 aa22.98■■□□□ 1.27
RDH13-223ENST00000610356 C3P01024 1663 aa22.96■■□□□ 1.27
RDH13-223ENST00000610356 NRXN3Q9Y4C0 1643 aa22.96■■□□□ 1.27
RDH13-223ENST00000610356 DLC1Q96QB1 1528 aa22.95■■□□□ 1.26
RDH13-223ENST00000610356 SAFB2Q14151 953 aaKnown RBP eCLIP22.94■■□□□ 1.26
RDH13-223ENST00000610356 PRAM1Q96QH2 718 aa22.94■■□□□ 1.26
RDH13-223ENST00000610356 CARD14Q9BXL6 1004 aa22.94■■□□□ 1.26
RDH13-223ENST00000610356 POGKQ9P215 609 aa22.94■■□□□ 1.26
RDH13-223ENST00000610356 PPP2R1AP30153 589 aa22.94■■□□□ 1.26
RDH13-223ENST00000610356 TMEM2Q9UHN6 1383 aa22.93■■□□□ 1.26
RDH13-223ENST00000610356 DNAJC5Q9H3Z4 198 aa22.92■■□□□ 1.26
RDH13-223ENST00000610356 NEFLP07196 543 aa22.92■■□□□ 1.26
RDH13-223ENST00000610356 SLC12A5Q9H2X9 1139 aa22.92■■□□□ 1.26
RDH13-223ENST00000610356 NSD3Q9BZ95 1437 aa22.92■■□□□ 1.26
RDH13-223ENST00000610356 INSRP06213 1382 aa22.91■■□□□ 1.26
RDH13-223ENST00000610356 CEBPAP49715 358 aaPredicted RBP22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms