RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 PLEKHH1Q9ULM0 1364 aa29.17■■■□□ 2.26
SHANK2-220ENST00000608988 KNSTRNQ9Y448 316 aa29.17■■■□□ 2.26
SHANK2-220ENST00000608988 ASXL1Q8IXJ9 1541 aa29.16■■■□□ 2.26
SHANK2-220ENST00000608988 FBLN2P98095 1184 aa29.15■■■□□ 2.26
SHANK2-220ENST00000608988 SCAPERQ9BY12 1400 aa29.15■■■□□ 2.26
SHANK2-220ENST00000608988 C20orf194Q5TEA3 1177 aa29.14■■■□□ 2.26
SHANK2-220ENST00000608988 NGEFQ8N5V2 710 aa29.14■■■□□ 2.26
SHANK2-220ENST00000608988 IL27Q8NEV9 243 aa29.14■■■□□ 2.26
SHANK2-220ENST00000608988 NFKBIBQ15653 356 aa29.14■■■□□ 2.26
SHANK2-220ENST00000608988 TTC37Q6PGP7 1564 aa29.13■■■□□ 2.25
SHANK2-220ENST00000608988 C8orf34Q49A92 452 aa29.12■■■□□ 2.25
SHANK2-220ENST00000608988 TRMT2AQ8IZ69 625 aaKnown RBP29.12■■■□□ 2.25
SHANK2-220ENST00000608988 AMER1Q5JTC6 1135 aaPredicted RBP29.11■■■□□ 2.25
SHANK2-220ENST00000608988 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.11■■■□□ 2.25
SHANK2-220ENST00000608988 SLFN5Q08AF3 891 aa29.1■■■□□ 2.25
SHANK2-220ENST00000608988 SPHKAPQ2M3C7 1700 aa29.1■■■□□ 2.25
SHANK2-220ENST00000608988 SCAF11Q99590 1463 aaKnown RBP29.1■■■□□ 2.25
SHANK2-220ENST00000608988 NINLQ9Y2I6 1382 aa29.07■■■□□ 2.24
SHANK2-220ENST00000608988 VIRMAQ69YN4 1812 aaKnown RBP29.06■■■□□ 2.24
SHANK2-220ENST00000608988 CHD1O14646 1710 aa29.06■■■□□ 2.24
SHANK2-220ENST00000608988 NKTRP30414 1462 aaKnown RBP29.06■■■□□ 2.24
SHANK2-220ENST00000608988 SLC24A1O60721 1099 aa29.06■■■□□ 2.24
SHANK2-220ENST00000608988 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.06■■■□□ 2.247e-7■□□□□ 10.7
SHANK2-220ENST00000608988 TRPM2O94759 1503 aa29.05■■■□□ 2.24
SHANK2-220ENST00000608988 KIAA1210Q9ULL0 1709 aa29.05■■■□□ 2.24
SHANK2-220ENST00000608988 CEP152O94986 1710 aa29.04■■■□□ 2.24
SHANK2-220ENST00000608988 MYOM1P52179 1685 aa29.04■■■□□ 2.24
SHANK2-220ENST00000608988 NEURL4Q96JN8 1562 aa29.02■■■□□ 2.24
SHANK2-220ENST00000608988 SKAP1Q86WV1 359 aa29.02■■■□□ 2.24
SHANK2-220ENST00000608988 KDM5AP29375 1690 aaKnown RBP29■■■□□ 2.23
SHANK2-220ENST00000608988 E9PSI1 815 aa28.98■■■□□ 2.23
SHANK2-220ENST00000608988 PTPRTO14522 1441 aa28.97■■■□□ 2.23
SHANK2-220ENST00000608988 CGNL1Q0VF96 1302 aa28.95■■■□□ 2.23
SHANK2-220ENST00000608988 PDE3AQ14432 1141 aa28.94■■■□□ 2.22
SHANK2-220ENST00000608988 AAMPQ13685 434 aa28.93■■■□□ 2.22
SHANK2-220ENST00000608988 SHROOM2Q13796 1616 aa28.93■■■□□ 2.22
SHANK2-220ENST00000608988 ZMYM3Q14202 1370 aa28.93■■■□□ 2.22
SHANK2-220ENST00000608988 MAPK8IP3Q9UPT6 1336 aa28.93■■■□□ 2.22
SHANK2-220ENST00000608988 FRAT1Q92837 279 aaPredicted RBP28.93■■■□□ 2.22
SHANK2-220ENST00000608988 ANO8Q9HCE9 1232 aaPredicted RBP28.93■■■□□ 2.22
SHANK2-220ENST00000608988 ABCC1P33527 1531 aa28.92■■■□□ 2.22
SHANK2-220ENST00000608988 PLCH2O75038 1416 aa28.91■■■□□ 2.22
SHANK2-220ENST00000608988 SLC4A3P48751 1232 aa28.89■■■□□ 2.22
SHANK2-220ENST00000608988 RTEL1-TNFRSF6BF6WH68 1400 aa28.89■■■□□ 2.22
SHANK2-220ENST00000608988 DEPDC5O75140 1603 aa28.89■■■□□ 2.21
SHANK2-220ENST00000608988 TET3O43151 1660 aa28.87■■■□□ 2.21
SHANK2-220ENST00000608988 CLTCL1P53675 1640 aa28.87■■■□□ 2.21
SHANK2-220ENST00000608988 RGS3P49796 1198 aa28.85■■■□□ 2.21
SHANK2-220ENST00000608988 RTN4Q9NQC3 1192 aaKnown RBP28.85■■■□□ 2.21
SHANK2-220ENST00000608988 BRPF3Q9ULD4 1205 aa28.85■■■□□ 2.21
SHANK2-220ENST00000608988 EFCAB2Q5VUJ9 269 aa28.83■■■□□ 2.21
SHANK2-220ENST00000608988 MYOM2P54296 1465 aa28.83■■■□□ 2.21
SHANK2-220ENST00000608988 BECN1Q14457 450 aa28.83■■■□□ 2.2
SHANK2-220ENST00000608988 ARAP3Q8WWN8 1544 aa28.82■■■□□ 2.2
SHANK2-220ENST00000608988 APAF1O14727 1248 aa28.82■■■□□ 2.2
SHANK2-220ENST00000608988 POLR3AO14802 1390 aaPredicted RBP28.81■■■□□ 2.2
SHANK2-220ENST00000608988 FRAT2O75474 233 aaPredicted RBP28.79■■■□□ 2.2
SHANK2-220ENST00000608988 VWDEQ8N2E2 1590 aa28.78■■■□□ 2.2
SHANK2-220ENST00000608988 MYO3AQ8NEV4 1616 aa28.78■■■□□ 2.2
SHANK2-220ENST00000608988 USP19O94966 1318 aa28.78■■■□□ 2.2
SHANK2-220ENST00000608988 CENPJQ9HC77 1338 aaPredicted RBP28.78■■■□□ 2.2
SHANK2-220ENST00000608988 PRKCSHP14314 528 aaPredicted RBP28.78■■■□□ 2.2
SHANK2-220ENST00000608988 CCDC146Q8IYE0 955 aa28.78■■■□□ 2.2
SHANK2-220ENST00000608988 CLUAP1Q96AJ1 413 aa28.78■■■□□ 2.2
SHANK2-220ENST00000608988 ERVK-7P63135 1459 aa28.77■■■□□ 2.2
SHANK2-220ENST00000608988 BCAR3O75815 825 aa28.77■■■□□ 2.2
SHANK2-220ENST00000608988 SPINK5Q9NQ38 1064 aaPredicted RBP28.77■■■□□ 2.2
SHANK2-220ENST00000608988 SBNO2Q9Y2G9 1366 aa28.77■■■□□ 2.2
SHANK2-220ENST00000608988 MAP3K4Q9Y6R4 1608 aa28.76■■■□□ 2.19
SHANK2-220ENST00000608988 ZFYVE16Q7Z3T8 1539 aa28.76■■■□□ 2.19
SHANK2-220ENST00000608988 IGHDP01880 384 aa28.74■■■□□ 2.19
SHANK2-220ENST00000608988 FAM43AQ8N2R8 423 aa28.74■■■□□ 2.19
SHANK2-220ENST00000608988 TRAPPC8Q9Y2L5 1435 aa28.74■■■□□ 2.19
SHANK2-220ENST00000608988 PMFBP1Q8TBY8 1022 aa28.73■■■□□ 2.19
SHANK2-220ENST00000608988 KANK1Q14678 1352 aa28.72■■■□□ 2.19
SHANK2-220ENST00000608988 UHRF1BP1LA0JNW5 1464 aa28.72■■■□□ 2.19
SHANK2-220ENST00000608988 NCBP3Q53F19 620 aaKnown RBP28.71■■■□□ 2.19
SHANK2-220ENST00000608988 NLRP1Q9C000 1473 aa28.71■■■□□ 2.19
SHANK2-220ENST00000608988 ABCA6Q8N139 1617 aa28.7■■■□□ 2.19
SHANK2-220ENST00000608988 SPAG9O60271 1321 aaKnown RBP28.7■■■□□ 2.18
SHANK2-220ENST00000608988 ZCCHC11Q5TAX3 1644 aaKnown RBP28.68■■■□□ 2.18
SHANK2-220ENST00000608988 CANXP27824 592 aaKnown RBP28.68■■■□□ 2.18
SHANK2-220ENST00000608988 WWC1Q8IX03 1113 aa28.68■■■□□ 2.18
SHANK2-220ENST00000608988 IFT172Q9UG01 1749 aa28.67■■■□□ 2.18
SHANK2-220ENST00000608988 SHPRHQ149N8 1683 aa28.67■■■□□ 2.18
SHANK2-220ENST00000608988 UPF2Q9HAU5 1272 aaKnown RBP28.66■■■□□ 2.18
SHANK2-220ENST00000608988 IQSEC2Q5JU85 1478 aa28.66■■■□□ 2.18
SHANK2-220ENST00000608988 NRXN1Q9ULB1 1477 aa28.65■■■□□ 2.18
SHANK2-220ENST00000608988 USP32Q8NFA0 1604 aa28.65■■■□□ 2.18
SHANK2-220ENST00000608988 L1TD1Q5T7N2 865 aaKnown RBP28.64■■■□□ 2.18
SHANK2-220ENST00000608988 SETBP1Q9Y6X0 1596 aa28.64■■■□□ 2.18
SHANK2-220ENST00000608988 WDR63Q8IWG1 891 aa28.63■■■□□ 2.17
SHANK2-220ENST00000608988 INO80Q9ULG1 1556 aaPredicted RBP28.62■■■□□ 2.17
SHANK2-220ENST00000608988 KIF1BO60333 1816 aa28.62■■■□□ 2.17
SHANK2-220ENST00000608988 RUNDC1Q96C34 613 aa28.62■■■□□ 2.17
SHANK2-220ENST00000608988 PHF23Q9BUL5 403 aaPredicted RBP28.62■■■□□ 2.17
SHANK2-220ENST00000608988 CARD14Q9BXL6 1004 aa28.62■■■□□ 2.17
SHANK2-220ENST00000608988 COG6Q9Y2V7 657 aa28.61■■■□□ 2.17
SHANK2-220ENST00000608988 DMRT2Q9Y5R5 561 aa28.61■■■□□ 2.17
SHANK2-220ENST00000608988 CCDC27Q2M243 656 aa28.6■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms