RNA–Protein interactions for RNA: ENST00000607632.1

PRDM16-210, Transcript of PR/SET domain 16, humanhuman

TSL 2

Gene PRDM16, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-210ENST00000607632 PLEKHG1Q9ULL1 1385 aa21.48■■□□□ 1.03
PRDM16-210ENST00000607632 SLC4A1APQ9BWU0 796 aaKnown RBP21.47■■□□□ 1.03
PRDM16-210ENST00000607632 HDGFP51858 240 aaKnown RBP21.45■■□□□ 1.02
PRDM16-210ENST00000607632 KIF1BO60333 1816 aa21.45■■□□□ 1.02
PRDM16-210ENST00000607632 NWD1Q149M9 1564 aa21.44■■□□□ 1.02
PRDM16-210ENST00000607632 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.44■■□□□ 1.02
PRDM16-210ENST00000607632 LRRC7Q96NW7 1537 aa21.44■■□□□ 1.02
PRDM16-210ENST00000607632 DIP2AQ14689 1571 aa21.42■■□□□ 1.02
PRDM16-210ENST00000607632 RAB3GAP2Q9H2M9 1393 aa21.42■■□□□ 1.02
PRDM16-210ENST00000607632 NEXMIFQ5QGS0 1516 aa21.41■■□□□ 1.02
PRDM16-210ENST00000607632 ADAMTS13Q76LX8 1427 aa21.41■■□□□ 1.02
PRDM16-210ENST00000607632 CHGAP10645 457 aaKnown RBP21.41■■□□□ 1.02
PRDM16-210ENST00000607632 MPHOSPH9Q99550 1183 aa21.4■■□□□ 1.02
PRDM16-210ENST00000607632 XIRP1Q702N8 1843 aaKnown RBP21.39■■□□□ 1.02
PRDM16-210ENST00000607632 SETBP1Q9Y6X0 1596 aa21.39■■□□□ 1.01
PRDM16-210ENST00000607632 CHD2O14647 1828 aaKnown RBP21.39■■□□□ 1.01
PRDM16-210ENST00000607632 NRXN3Q9Y4C0 1643 aa21.38■■□□□ 1.01
PRDM16-210ENST00000607632 HRCP23327 699 aa21.38■■□□□ 1.01
PRDM16-210ENST00000607632 SLC26A8Q96RN1 970 aa21.38■■□□□ 1.01
PRDM16-210ENST00000607632 ALKQ9UM73 1620 aa21.37■■□□□ 1.01
PRDM16-210ENST00000607632 KCNA6P17658 529 aa21.37■■□□□ 1.01
PRDM16-210ENST00000607632 TBX22Q9Y458 520 aa21.37■■□□□ 1.01
PRDM16-210ENST00000607632 NKTRP30414 1462 aaKnown RBP21.37■■□□□ 1.01
PRDM16-210ENST00000607632 PPP1R15AO75807 674 aaPredicted RBP21.36■■□□□ 1.01
PRDM16-210ENST00000607632 PIK3R4Q99570 1358 aa21.35■■□□□ 1.01
PRDM16-210ENST00000607632 FOXD1Q16676 465 aa21.33■■□□□ 1.01
PRDM16-210ENST00000607632 PPLO60437 1756 aa21.32■■□□□ 1
PRDM16-210ENST00000607632 CCDC144AA2RUR9 1427 aa21.31■■□□□ 1
PRDM16-210ENST00000607632 SPATA31E1Q6ZUB1 1445 aa21.31■■□□□ 1
PRDM16-210ENST00000607632 UBAP1LF5GYI3 381 aa21.31■■□□□ 1
PRDM16-210ENST00000607632 NUTM2DQ5VT03 806 aaPredicted RBP21.3■■□□□ 1
PRDM16-210ENST00000607632 RPGRIP1LQ68CZ1 1315 aa21.29■■□□□ 1
PRDM16-210ENST00000607632 DISP3Q9P2K9 1392 aa21.29■■□□□ 1
PRDM16-210ENST00000607632 ZNF326Q5BKZ1 582 aaKnown RBP21.29■■□□□ 1
PRDM16-210ENST00000607632 ILDR2Q71H61 639 aa21.28■■□□□ 1
PRDM16-210ENST00000607632 IFT172Q9UG01 1749 aa21.28■■□□□ 1
PRDM16-210ENST00000607632 SETD1AO15047 1707 aaKnown RBP21.27■■□□□ 1
PRDM16-210ENST00000607632 TOM1O60784 492 aa21.27■■□□□ 1
PRDM16-210ENST00000607632 BCANQ96GW7 911 aa21.27■■□□□ 1
PRDM16-210ENST00000607632 XRN1Q8IZH2 1706 aaKnown RBP21.26■□□□□ 0.99
PRDM16-210ENST00000607632 TMEM94Q12767 1356 aa21.26■□□□□ 0.99
PRDM16-210ENST00000607632 PTPRUQ92729 1446 aa21.25■□□□□ 0.99
PRDM16-210ENST00000607632 NCOA3Q9Y6Q9 1424 aa21.25■□□□□ 0.99
PRDM16-210ENST00000607632 VGFO15240 615 aaPredicted RBP21.23■□□□□ 0.99
PRDM16-210ENST00000607632 ANKRD30BQ9BXX2 1392 aa21.23■□□□□ 0.99
PRDM16-210ENST00000607632 PROSER2Q86WR7 435 aaPredicted RBP21.21■□□□□ 0.99
PRDM16-210ENST00000607632 SENP3Q9H4L4 574 aaPredicted RBP21.21■□□□□ 0.99
PRDM16-210ENST00000607632 PRAG1Q86YV5 1406 aa21.21■□□□□ 0.99
PRDM16-210ENST00000607632 METP08581 1390 aa21.2■□□□□ 0.98
PRDM16-210ENST00000607632 AMOTL2Q9Y2J4 779 aa21.17■□□□□ 0.98
PRDM16-210ENST00000607632 SOCS7O14512 581 aa21.15■□□□□ 0.98
PRDM16-210ENST00000607632 NRXN1Q9ULB1 1477 aa21.14■□□□□ 0.98
PRDM16-210ENST00000607632 MYOM2P54296 1465 aa21.13■□□□□ 0.97
PRDM16-210ENST00000607632 PIK3C2GO75747 1445 aa21.13■□□□□ 0.97
PRDM16-210ENST00000607632 FAM135BQ49AJ0 1406 aa21.13■□□□□ 0.97
PRDM16-210ENST00000607632 MSH6P52701 1360 aa21.13■□□□□ 0.97
PRDM16-210ENST00000607632 ADGRF5Q8IZF2 1346 aa21.13■□□□□ 0.97
PRDM16-210ENST00000607632 PIP4K2BP78356 416 aa21.13■□□□□ 0.97
PRDM16-210ENST00000607632 RBM33Q96EV2 1170 aaKnown RBP21.13■□□□□ 0.97
PRDM16-210ENST00000607632 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.12■□□□□ 0.97
PRDM16-210ENST00000607632 RGL3Q3MIN7 710 aa21.12■□□□□ 0.97
PRDM16-210ENST00000607632 PTCH1Q13635 1447 aa21.12■□□□□ 0.97
PRDM16-210ENST00000607632 DCCP43146 1447 aa21.1■□□□□ 0.97
PRDM16-210ENST00000607632 ASXL1Q8IXJ9 1541 aa21.09■□□□□ 0.97
PRDM16-210ENST00000607632 HSPA1LP34931 641 aa21.08■□□□□ 0.97
PRDM16-210ENST00000607632 ROBO1Q9Y6N7 1651 aa21.08■□□□□ 0.96
PRDM16-210ENST00000607632 SCAF1Q9H7N4 1312 aaKnown RBP21.07■□□□□ 0.96
PRDM16-210ENST00000607632 C19orf44Q9H6X5 657 aa21.07■□□□□ 0.96
PRDM16-210ENST00000607632 LAMC1P11047 1609 aa21.07■□□□□ 0.96
PRDM16-210ENST00000607632 TECPR2O15040 1411 aa21.06■□□□□ 0.96
PRDM16-210ENST00000607632 KNDC1Q76NI1 1749 aa21.06■□□□□ 0.96
PRDM16-210ENST00000607632 NALCNQ8IZF0 1738 aa21.06■□□□□ 0.96
PRDM16-210ENST00000607632 ADGRL3Q9HAR2 1447 aa21.04■□□□□ 0.96
PRDM16-210ENST00000607632 ROBO2Q9HCK4 1378 aa21.03■□□□□ 0.96
PRDM16-210ENST00000607632 CADPS2Q86UW7 1296 aa21.03■□□□□ 0.96
PRDM16-210ENST00000607632 SLAIN2Q9P270 581 aa21.02■□□□□ 0.96
PRDM16-210ENST00000607632 LRPPRCP42704 1394 aaKnown RBP21.01■□□□□ 0.95
PRDM16-210ENST00000607632 STAC3Q96MF2 364 aa21.01■□□□□ 0.95
PRDM16-210ENST00000607632 C14orf93Q9H972 538 aaKnown RBP21.01■□□□□ 0.95
PRDM16-210ENST00000607632 DHX57Q6P158 1386 aaKnown RBP21■□□□□ 0.95
PRDM16-210ENST00000607632 ABCC11Q96J66 1382 aa21■□□□□ 0.95
PRDM16-210ENST00000607632 MST1RQ04912 1400 aa20.98■□□□□ 0.95
PRDM16-210ENST00000607632 C14orf37Q86TY3 774 aa20.98■□□□□ 0.95
PRDM16-210ENST00000607632 ATF3P18847 181 aa20.97■□□□□ 0.95
PRDM16-210ENST00000607632 ADGRB1O14514 1584 aa20.97■□□□□ 0.95
PRDM16-210ENST00000607632 YTHDC2Q9H6S0 1430 aaKnown RBP20.96■□□□□ 0.95
PRDM16-210ENST00000607632 TRIM26Q12899 539 aaPredicted RBP20.96■□□□□ 0.95
PRDM16-210ENST00000607632 AHDC1Q5TGY3 1603 aaPredicted RBP20.96■□□□□ 0.95
PRDM16-210ENST00000607632 CDC42BPGQ6DT37 1551 aa20.94■□□□□ 0.94
PRDM16-210ENST00000607632 CFAP70Q5T0N1 1121 aa20.94■□□□□ 0.94
PRDM16-210ENST00000607632 SIRT1Q96EB6 747 aa20.94■□□□□ 0.94
PRDM16-210ENST00000607632 COL16A1Q07092 1604 aaPredicted RBP20.93■□□□□ 0.94
PRDM16-210ENST00000607632 TMEM132EQ6IEE7 984 aa20.93■□□□□ 0.94
PRDM16-210ENST00000607632 PHLPP1O60346 1717 aa20.92■□□□□ 0.94
PRDM16-210ENST00000607632 DLC1Q96QB1 1528 aa20.92■□□□□ 0.94
PRDM16-210ENST00000607632 MED1Q15648 1581 aaPredicted RBP20.92■□□□□ 0.94
PRDM16-210ENST00000607632 DCAF11Q8TEB1 546 aa20.91■□□□□ 0.94
PRDM16-210ENST00000607632 NHSL1Q5SYE7 1610 aa20.9■□□□□ 0.94
PRDM16-210ENST00000607632 BRINP3Q76B58 766 aa20.9■□□□□ 0.94
PRDM16-210ENST00000607632 KIAA1210Q9ULL0 1709 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms