RNA–Protein interactions for RNA: ENST00000606540.1

AC116351.2-201, humanhuman

BASIC

Gene AC116351.2, Length 1,585 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC116351.2-201ENST00000606540 PPP1R15AO75807 674 aaPredicted RBP28.44■■■□□ 2.14
AC116351.2-201ENST00000606540 MYOM2P54296 1465 aa28.44■■■□□ 2.14
AC116351.2-201ENST00000606540 THEMISQ8N1K5 641 aaPredicted RBP28.43■■■□□ 2.14
AC116351.2-201ENST00000606540 TMEM2Q9UHN6 1383 aa28.43■■■□□ 2.14
AC116351.2-201ENST00000606540 PPLO60437 1756 aa28.42■■■□□ 2.14
AC116351.2-201ENST00000606540 ZFYVE9O95405 1425 aa28.41■■■□□ 2.14
AC116351.2-201ENST00000606540 RIMS2Q9UQ26 1411 aa28.41■■■□□ 2.14
AC116351.2-201ENST00000606540 SLIT1O75093 1534 aa28.41■■■□□ 2.14
AC116351.2-201ENST00000606540 ARHGAP23Q9P227 1491 aa28.4■■■□□ 2.14
AC116351.2-201ENST00000606540 KDM2AQ9Y2K7 1162 aa28.4■■■□□ 2.14
AC116351.2-201ENST00000606540 VGFO15240 615 aaPredicted RBP28.37■■■□□ 2.13
AC116351.2-201ENST00000606540 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.37■■■□□ 2.13
AC116351.2-201ENST00000606540 PRAG1Q86YV5 1406 aa28.36■■■□□ 2.13
AC116351.2-201ENST00000606540 NRXN1Q9ULB1 1477 aa28.36■■■□□ 2.13
AC116351.2-201ENST00000606540 HDGFP51858 240 aaKnown RBP28.36■■■□□ 2.13
AC116351.2-201ENST00000606540 ADGRF5Q8IZF2 1346 aa28.33■■■□□ 2.13
AC116351.2-201ENST00000606540 LMTK3Q96Q04 1460 aa28.33■■■□□ 2.13
AC116351.2-201ENST00000606540 NBPF8Q3BBV2 869 aa28.32■■■□□ 2.12
AC116351.2-201ENST00000606540 NUTM2DQ5VT03 806 aaPredicted RBP28.32■■■□□ 2.12
AC116351.2-201ENST00000606540 PIK3C2GO75747 1445 aa28.31■■■□□ 2.12
AC116351.2-201ENST00000606540 EID1Q9Y6B2 187 aa28.3■■■□□ 2.12
AC116351.2-201ENST00000606540 TXNDC2Q86VQ3 553 aa28.28■■■□□ 2.12
AC116351.2-201ENST00000606540 SCAF11Q99590 1463 aaKnown RBP28.28■■■□□ 2.12
AC116351.2-201ENST00000606540 LTKP29376 864 aa28.28■■■□□ 2.12
AC116351.2-201ENST00000606540 ANKLE2Q86XL3 938 aa28.24■■■□□ 2.11
AC116351.2-201ENST00000606540 PLEKHG1Q9ULL1 1385 aa28.24■■■□□ 2.11
AC116351.2-201ENST00000606540 RALGAPBQ86X10 1494 aa28.24■■■□□ 2.11
AC116351.2-201ENST00000606540 TRPM1Q7Z4N2 1603 aa28.21■■■□□ 2.11
AC116351.2-201ENST00000606540 SETBP1Q9Y6X0 1596 aa28.21■■■□□ 2.11
AC116351.2-201ENST00000606540 KIAA1210Q9ULL0 1709 aa28.2■■■□□ 2.1
AC116351.2-201ENST00000606540 HSPA2P54652 639 aa28.19■■■□□ 2.1
AC116351.2-201ENST00000606540 C14orf93Q9H972 538 aaKnown RBP28.19■■■□□ 2.1
AC116351.2-201ENST00000606540 LAMC1P11047 1609 aa28.18■■■□□ 2.1
AC116351.2-201ENST00000606540 CFAP70Q5T0N1 1121 aa28.17■■■□□ 2.1
AC116351.2-201ENST00000606540 NRXN3Q9Y4C0 1643 aa28.17■■■□□ 2.1
AC116351.2-201ENST00000606540 MED14O60244 1454 aa28.16■■■□□ 2.1
AC116351.2-201ENST00000606540 GPRASP1Q5JY77 1395 aa28.16■■■□□ 2.1
AC116351.2-201ENST00000606540 POLR1AO95602 1720 aaPredicted RBP28.15■■■□□ 2.1
AC116351.2-201ENST00000606540 ALKQ9UM73 1620 aa28.15■■■□□ 2.1
AC116351.2-201ENST00000606540 ROCK2O75116 1388 aaKnown RBP28.15■■■□□ 2.1
AC116351.2-201ENST00000606540 ADAMTS13Q76LX8 1427 aa28.14■■■□□ 2.1
AC116351.2-201ENST00000606540 IQGAP1P46940 1657 aa28.14■■■□□ 2.09
AC116351.2-201ENST00000606540 NBPF1Q3BBV0 1214 aa28.13■■■□□ 2.09
AC116351.2-201ENST00000606540 NPHP4O75161 1426 aaPredicted RBP28.12■■■□□ 2.09
AC116351.2-201ENST00000606540 BCANQ96GW7 911 aa28.11■■■□□ 2.09
AC116351.2-201ENST00000606540 SENP3Q9H4L4 574 aaPredicted RBP28.11■■■□□ 2.09
AC116351.2-201ENST00000606540 NCKAP5LQ9HCH0 1330 aa28.11■■■□□ 2.09
AC116351.2-201ENST00000606540 ADGRB1O14514 1584 aa28.11■■■□□ 2.09
AC116351.2-201ENST00000606540 DIP2AQ14689 1571 aa28.09■■■□□ 2.09
AC116351.2-201ENST00000606540 SETD1AO15047 1707 aaKnown RBP28.09■■■□□ 2.09
AC116351.2-201ENST00000606540 ASXL1Q8IXJ9 1541 aa28.07■■■□□ 2.08
AC116351.2-201ENST00000606540 CARD11Q9BXL7 1154 aa28.07■■■□□ 2.08
AC116351.2-201ENST00000606540 TBX22Q9Y458 520 aa28.07■■■□□ 2.08
AC116351.2-201ENST00000606540 SLC26A8Q96RN1 970 aa28.04■■■□□ 2.08
AC116351.2-201ENST00000606540 METP08581 1390 aa28.03■■■□□ 2.08
AC116351.2-201ENST00000606540 TMEM132EQ6IEE7 984 aa28.03■■■□□ 2.08
AC116351.2-201ENST00000606540 STRCQ7RTU9 1775 aa28.02■■■□□ 2.08
AC116351.2-201ENST00000606540 PIK3R4Q99570 1358 aa27.99■■■□□ 2.07
AC116351.2-201ENST00000606540 YTHDC2Q9H6S0 1430 aaKnown RBP27.99■■■□□ 2.07
AC116351.2-201ENST00000606540 USP47Q96K76 1375 aa27.98■■■□□ 2.07
AC116351.2-201ENST00000606540 LRPPRCP42704 1394 aaKnown RBP27.97■■■□□ 2.07
AC116351.2-201ENST00000606540 EIF4G2P78344 907 aaKnown RBP eCLIP27.96■■■□□ 2.07
AC116351.2-201ENST00000606540 ABCC11Q96J66 1382 aa27.94■■■□□ 2.06
AC116351.2-201ENST00000606540 EIF3AQ14152 1382 aaKnown RBP27.93■■■□□ 2.06
AC116351.2-201ENST00000606540 TECPR2O15040 1411 aa27.92■■■□□ 2.06
AC116351.2-201ENST00000606540 PTPRUQ92729 1446 aa27.92■■■□□ 2.06
AC116351.2-201ENST00000606540 TRAK1Q9UPV9 953 aa27.91■■■□□ 2.06
AC116351.2-201ENST00000606540 DLC1Q96QB1 1528 aa27.91■■■□□ 2.06
AC116351.2-201ENST00000606540 HSPA5P11021 654 aaKnown RBP27.9■■■□□ 2.06
AC116351.2-201ENST00000606540 STK26Q9P289 416 aa27.9■■■□□ 2.06
AC116351.2-201ENST00000606540 DMRT2Q9Y5R5 561 aa27.9■■■□□ 2.06
AC116351.2-201ENST00000606540 KNDC1Q76NI1 1749 aa27.89■■■□□ 2.06
AC116351.2-201ENST00000606540 CPS1P31327 1500 aa27.88■■■□□ 2.05
AC116351.2-201ENST00000606540 XRN1Q8IZH2 1706 aaKnown RBP27.88■■■□□ 2.05
AC116351.2-201ENST00000606540 AMOTL2Q9Y2J4 779 aa27.87■■■□□ 2.05
AC116351.2-201ENST00000606540 ARHGEF28Q8N1W1 1705 aaKnown RBP27.86■■■□□ 2.05
AC116351.2-201ENST00000606540 PTCH1Q13635 1447 aa27.85■■■□□ 2.05
AC116351.2-201ENST00000606540 ST20-MTHFSA0A0A6YYL1 179 aa27.85■■■□□ 2.05
AC116351.2-201ENST00000606540 SIRT1Q96EB6 747 aa27.85■■■□□ 2.05
AC116351.2-201ENST00000606540 NWD1Q149M9 1564 aa27.84■■■□□ 2.05
AC116351.2-201ENST00000606540 FAM135BQ49AJ0 1406 aa27.84■■■□□ 2.05
AC116351.2-201ENST00000606540 CHD2O14647 1828 aaKnown RBP27.84■■■□□ 2.05
AC116351.2-201ENST00000606540 KCNA6P17658 529 aa27.83■■■□□ 2.05
AC116351.2-201ENST00000606540 CENPJQ9HC77 1338 aaPredicted RBP27.83■■■□□ 2.04
AC116351.2-201ENST00000606540 ROBO2Q9HCK4 1378 aa27.81■■■□□ 2.04
AC116351.2-201ENST00000606540 PRAM1Q96QH2 718 aa27.8■■■□□ 2.04
AC116351.2-201ENST00000606540 HIRIP3Q9BW71 556 aaPredicted RBP27.8■■■□□ 2.04
AC116351.2-201ENST00000606540 SBNO2Q9Y2G9 1366 aa27.8■■■□□ 2.04
AC116351.2-201ENST00000606540 TESK2Q96S53 571 aa27.78■■■□□ 2.04
AC116351.2-201ENST00000606540 POGKQ9P215 609 aa27.77■■■□□ 2.04
AC116351.2-201ENST00000606540 NKTRP30414 1462 aaKnown RBP27.77■■■□□ 2.04
AC116351.2-201ENST00000606540 PLEKHH1Q9ULM0 1364 aa27.76■■■□□ 2.03
AC116351.2-201ENST00000606540 QRICH2Q9H0J4 1663 aa27.75■■■□□ 2.03
AC116351.2-201ENST00000606540 WAPLQ7Z5K2 1190 aa27.74■■■□□ 2.03
AC116351.2-201ENST00000606540 SLC24A1O60721 1099 aa27.73■■■□□ 2.03
AC116351.2-201ENST00000606540 SAFB2Q14151 953 aaKnown RBP eCLIP27.72■■■□□ 2.03
AC116351.2-201ENST00000606540 ZNF316A6NFI3 1004 aaPredicted RBP27.71■■■□□ 2.03
AC116351.2-201ENST00000606540 ZNF335Q9H4Z2 1342 aaPredicted RBP27.7■■■□□ 2.02
AC116351.2-201ENST00000606540 STRCP1A6NGW2 1772 aa27.7■■■□□ 2.02
AC116351.2-201ENST00000606540 TMF1P82094 1093 aa27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms