RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 IQGAP1P46940 1657 aa11.16□□□□□ -0.62
MSH6-211ENST00000606499 RIMS2Q9UQ26 1411 aa11.16□□□□□ -0.62
MSH6-211ENST00000606499 ZNF326Q5BKZ1 582 aaKnown RBP11.15□□□□□ -0.62
MSH6-211ENST00000606499 STRCQ7RTU9 1775 aa11.15□□□□□ -0.62
MSH6-211ENST00000606499 TMEM2Q9UHN6 1383 aa11.15□□□□□ -0.63
MSH6-211ENST00000606499 TONSLQ96HA7 1378 aa11.14□□□□□ -0.63
MSH6-211ENST00000606499 NRXN3Q9Y4C0 1643 aa11.13□□□□□ -0.63
MSH6-211ENST00000606499 MYOM2P54296 1465 aa11.13□□□□□ -0.63
MSH6-211ENST00000606499 HSPA2P54652 639 aa11.13□□□□□ -0.63
MSH6-211ENST00000606499 THEMISQ8N1K5 641 aaPredicted RBP11.13□□□□□ -0.63
MSH6-211ENST00000606499 SCAF11Q99590 1463 aaKnown RBP11.12□□□□□ -0.63
MSH6-211ENST00000606499 NUTM2DQ5VT03 806 aaPredicted RBP11.12□□□□□ -0.63
MSH6-211ENST00000606499 L3MBTL2Q969R5 705 aa11.12□□□□□ -0.63
MSH6-211ENST00000606499 SETD1AO15047 1707 aaKnown RBP11.12□□□□□ -0.63
MSH6-211ENST00000606499 DCAF11Q8TEB1 546 aa11.11□□□□□ -0.63
MSH6-211ENST00000606499 NRXN1Q9ULB1 1477 aa11.11□□□□□ -0.63
MSH6-211ENST00000606499 SETBP1Q9Y6X0 1596 aa11.11□□□□□ -0.63
MSH6-211ENST00000606499 LAMC1P11047 1609 aa11.1□□□□□ -0.63
MSH6-211ENST00000606499 TRPM1Q7Z4N2 1603 aa11.1□□□□□ -0.63
MSH6-211ENST00000606499 LTKP29376 864 aa11.1□□□□□ -0.63
MSH6-211ENST00000606499 RPGRIP1LQ68CZ1 1315 aa11.09□□□□□ -0.63
MSH6-211ENST00000606499 KDM2AQ9Y2K7 1162 aa11.09□□□□□ -0.63
MSH6-211ENST00000606499 PIK3C2GO75747 1445 aa11.09□□□□□ -0.63
MSH6-211ENST00000606499 ADGRF5Q8IZF2 1346 aa11.09□□□□□ -0.63
MSH6-211ENST00000606499 MED14O60244 1454 aa11.08□□□□□ -0.64
MSH6-211ENST00000606499 PPP1R15AO75807 674 aaPredicted RBP11.08□□□□□ -0.64
MSH6-211ENST00000606499 TXNDC2Q86VQ3 553 aa11.08□□□□□ -0.64
MSH6-211ENST00000606499 KIAA1210Q9ULL0 1709 aa11.08□□□□□ -0.64
MSH6-211ENST00000606499 PRAG1Q86YV5 1406 aa11.08□□□□□ -0.64
MSH6-211ENST00000606499 NCKAP5LQ9HCH0 1330 aa11.08□□□□□ -0.64
MSH6-211ENST00000606499 PLEKHG1Q9ULL1 1385 aa11.07□□□□□ -0.64
MSH6-211ENST00000606499 ALKQ9UM73 1620 aa11.07□□□□□ -0.64
MSH6-211ENST00000606499 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.07□□□□□ -0.64
MSH6-211ENST00000606499 EID1Q9Y6B2 187 aa11.07□□□□□ -0.64
MSH6-211ENST00000606499 NPHP4O75161 1426 aaPredicted RBP11.07□□□□□ -0.64
MSH6-211ENST00000606499 DIP2AQ14689 1571 aa11.07□□□□□ -0.64
MSH6-211ENST00000606499 ASXL1Q8IXJ9 1541 aa11.06□□□□□ -0.64
MSH6-211ENST00000606499 ANKLE2Q86XL3 938 aa11.06□□□□□ -0.64
MSH6-211ENST00000606499 VGFO15240 615 aaPredicted RBP11.05□□□□□ -0.64
MSH6-211ENST00000606499 ADAMTS13Q76LX8 1427 aa11.05□□□□□ -0.64
MSH6-211ENST00000606499 HDGFP51858 240 aaKnown RBP11.04□□□□□ -0.64
MSH6-211ENST00000606499 TIMELESSQ9UNS1 1208 aa11.04□□□□□ -0.64
MSH6-211ENST00000606499 ADGRB1O14514 1584 aa11.03□□□□□ -0.64
MSH6-211ENST00000606499 NBPF8Q3BBV2 869 aa11.03□□□□□ -0.64
MSH6-211ENST00000606499 RALGAPBQ86X10 1494 aa11.03□□□□□ -0.64
MSH6-211ENST00000606499 XRN1Q8IZH2 1706 aaKnown RBP11.02□□□□□ -0.65
MSH6-211ENST00000606499 BCANQ96GW7 911 aa11.02□□□□□ -0.65
MSH6-211ENST00000606499 STAC3Q96MF2 364 aa11.02□□□□□ -0.65
MSH6-211ENST00000606499 SLC26A8Q96RN1 970 aa11.02□□□□□ -0.65
MSH6-211ENST00000606499 STRCP1A6NGW2 1772 aa11.02□□□□□ -0.65
MSH6-211ENST00000606499 CHD2O14647 1828 aaKnown RBP11.02□□□□□ -0.65
MSH6-211ENST00000606499 KNDC1Q76NI1 1749 aa11.01□□□□□ -0.65
MSH6-211ENST00000606499 CFAP70Q5T0N1 1121 aa11.01□□□□□ -0.65
MSH6-211ENST00000606499 ARHGEF28Q8N1W1 1705 aaKnown RBP11.01□□□□□ -0.65
MSH6-211ENST00000606499 NWD1Q149M9 1564 aa11□□□□□ -0.65
MSH6-211ENST00000606499 METP08581 1390 aa11□□□□□ -0.65
MSH6-211ENST00000606499 NBPF1Q3BBV0 1214 aa10.98□□□□□ -0.65
MSH6-211ENST00000606499 C14orf93Q9H972 538 aaKnown RBP10.98□□□□□ -0.65
MSH6-211ENST00000606499 ROCK2O75116 1388 aaKnown RBP10.98□□□□□ -0.65
MSH6-211ENST00000606499 PTPRUQ92729 1446 aa10.98□□□□□ -0.65
MSH6-211ENST00000606499 CPS1P31327 1500 aa10.98□□□□□ -0.65
MSH6-211ENST00000606499 TMEM132EQ6IEE7 984 aa10.97□□□□□ -0.65
MSH6-211ENST00000606499 TBX22Q9Y458 520 aa10.97□□□□□ -0.65
MSH6-211ENST00000606499 YTHDC2Q9H6S0 1430 aaKnown RBP10.97□□□□□ -0.65
MSH6-211ENST00000606499 QRICH2Q9H0J4 1663 aa10.96□□□□□ -0.65
MSH6-211ENST00000606499 GPRASP1Q5JY77 1395 aa10.96□□□□□ -0.65
MSH6-211ENST00000606499 ZEB1P37275 1124 aaPredicted RBP10.96□□□□□ -0.65
MSH6-211ENST00000606499 PIK3R4Q99570 1358 aa10.95□□□□□ -0.66
MSH6-211ENST00000606499 XIRP1Q702N8 1843 aaKnown RBP10.95□□□□□ -0.66
MSH6-211ENST00000606499 LRPPRCP42704 1394 aaKnown RBP10.94□□□□□ -0.66
MSH6-211ENST00000606499 DMRT2Q9Y5R5 561 aa10.94□□□□□ -0.66
MSH6-211ENST00000606499 NALCNQ8IZF0 1738 aa10.94□□□□□ -0.66
MSH6-211ENST00000606499 DLC1Q96QB1 1528 aa10.94□□□□□ -0.66
MSH6-211ENST00000606499 NKTRP30414 1462 aaKnown RBP10.93□□□□□ -0.66
MSH6-211ENST00000606499 TECPR2O15040 1411 aa10.93□□□□□ -0.66
MSH6-211ENST00000606499 ZNF335Q9H4Z2 1342 aaPredicted RBP10.93□□□□□ -0.66
MSH6-211ENST00000606499 CARD11Q9BXL7 1154 aa10.93□□□□□ -0.66
MSH6-211ENST00000606499 STK26Q9P289 416 aa10.93□□□□□ -0.66
MSH6-211ENST00000606499 PTCH1Q13635 1447 aa10.92□□□□□ -0.66
MSH6-211ENST00000606499 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.92□□□□□ -0.66
MSH6-211ENST00000606499 LTBP4Q8N2S1 1624 aa10.91□□□□□ -0.66
MSH6-211ENST00000606499 ROBO2Q9HCK4 1378 aa10.91□□□□□ -0.66
MSH6-211ENST00000606499 KCNA6P17658 529 aa10.91□□□□□ -0.66
MSH6-211ENST00000606499 TRAK1Q9UPV9 953 aa10.91□□□□□ -0.66
MSH6-211ENST00000606499 AMOTL2Q9Y2J4 779 aa10.91□□□□□ -0.66
MSH6-211ENST00000606499 ABCC11Q96J66 1382 aa10.9□□□□□ -0.66
MSH6-211ENST00000606499 USP47Q96K76 1375 aa10.9□□□□□ -0.66
MSH6-211ENST00000606499 PLEKHH1Q9ULM0 1364 aa10.9□□□□□ -0.67
MSH6-211ENST00000606499 FAM135BQ49AJ0 1406 aa10.89□□□□□ -0.67
MSH6-211ENST00000606499 EIF3AQ14152 1382 aaKnown RBP10.89□□□□□ -0.67
MSH6-211ENST00000606499 LRRC7Q96NW7 1537 aa10.89□□□□□ -0.67
MSH6-211ENST00000606499 ADGRB2O60241 1585 aa10.88□□□□□ -0.67
MSH6-211ENST00000606499 PRAM1Q96QH2 718 aa10.88□□□□□ -0.67
MSH6-211ENST00000606499 SAFB2Q14151 953 aaKnown RBP eCLIP10.87□□□□□ -0.67
MSH6-211ENST00000606499 WAPLQ7Z5K2 1190 aa10.87□□□□□ -0.67
MSH6-211ENST00000606499 RBM33Q96EV2 1170 aaKnown RBP10.87□□□□□ -0.67
MSH6-211ENST00000606499 CDC42BPGQ6DT37 1551 aa10.86□□□□□ -0.67
MSH6-211ENST00000606499 TULP4Q9NRJ4 1543 aa10.86□□□□□ -0.67
MSH6-211ENST00000606499 FMN2Q9NZ56 1722 aa10.86□□□□□ -0.67
MSH6-211ENST00000606499 CENPJQ9HC77 1338 aaPredicted RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms