RNA–Protein interactions for RNA: ENST00000601393.1

SNRPA-210, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-210ENST00000601393 ACIN1Q9UKV3 1341 aaKnown RBP25.1■■□□□ 1.61
SNRPA-210ENST00000601393 ILDR1Q86SU0 546 aaPredicted RBP25.08■■□□□ 1.61
SNRPA-210ENST00000601393 FBXO41Q8TF61 875 aa25.07■■□□□ 1.6
SNRPA-210ENST00000601393 MPHOSPH9Q99550 1183 aa25.06■■□□□ 1.6
SNRPA-210ENST00000601393 PLEKHG1Q9ULL1 1385 aa25.05■■□□□ 1.6
SNRPA-210ENST00000601393 NEXMIFQ5QGS0 1516 aa25.04■■□□□ 1.6
SNRPA-210ENST00000601393 CHGAP10645 457 aaKnown RBP25.03■■□□□ 1.6
SNRPA-210ENST00000601393 NRXN3Q9Y4C0 1643 aa25.01■■□□□ 1.59
SNRPA-210ENST00000601393 FOXD1Q16676 465 aa25.01■■□□□ 1.59
SNRPA-210ENST00000601393 NWD1Q149M9 1564 aa25.01■■□□□ 1.59
SNRPA-210ENST00000601393 HRCP23327 699 aa25■■□□□ 1.59
SNRPA-210ENST00000601393 DIP2AQ14689 1571 aa24.99■■□□□ 1.59
SNRPA-210ENST00000601393 XIRP1Q702N8 1843 aaKnown RBP24.99■■□□□ 1.59
SNRPA-210ENST00000601393 CHD2O14647 1828 aaKnown RBP24.98■■□□□ 1.59
SNRPA-210ENST00000601393 PPLO60437 1756 aa24.98■■□□□ 1.59
SNRPA-210ENST00000601393 ADAMTS13Q76LX8 1427 aa24.98■■□□□ 1.59
SNRPA-210ENST00000601393 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.98■■□□□ 1.59
SNRPA-210ENST00000601393 SETBP1Q9Y6X0 1596 aa24.97■■□□□ 1.59
SNRPA-210ENST00000601393 LRRC7Q96NW7 1537 aa24.97■■□□□ 1.59
SNRPA-210ENST00000601393 HDGFP51858 240 aaKnown RBP24.96■■□□□ 1.59
SNRPA-210ENST00000601393 IFT172Q9UG01 1749 aa24.95■■□□□ 1.59
SNRPA-210ENST00000601393 SLC26A8Q96RN1 970 aa24.94■■□□□ 1.58
SNRPA-210ENST00000601393 CCDC144AA2RUR9 1427 aa24.94■■□□□ 1.58
SNRPA-210ENST00000601393 SPATA31E1Q6ZUB1 1445 aa24.94■■□□□ 1.58
SNRPA-210ENST00000601393 PPP1R15AO75807 674 aaPredicted RBP24.93■■□□□ 1.58
SNRPA-210ENST00000601393 NUTM2DQ5VT03 806 aaPredicted RBP24.92■■□□□ 1.58
SNRPA-210ENST00000601393 SETD1AO15047 1707 aaKnown RBP24.91■■□□□ 1.58
SNRPA-210ENST00000601393 ALKQ9UM73 1620 aa24.9■■□□□ 1.58
SNRPA-210ENST00000601393 NKTRP30414 1462 aaKnown RBP24.89■■□□□ 1.58
SNRPA-210ENST00000601393 TBX22Q9Y458 520 aa24.89■■□□□ 1.58
SNRPA-210ENST00000601393 ZNF326Q5BKZ1 582 aaKnown RBP24.88■■□□□ 1.57
SNRPA-210ENST00000601393 KCNA6P17658 529 aa24.87■■□□□ 1.57
SNRPA-210ENST00000601393 ANKRD30BQ9BXX2 1392 aa24.86■■□□□ 1.57
SNRPA-210ENST00000601393 PIK3R4Q99570 1358 aa24.85■■□□□ 1.57
SNRPA-210ENST00000601393 XRN1Q8IZH2 1706 aaKnown RBP24.85■■□□□ 1.57
SNRPA-210ENST00000601393 RPGRIP1LQ68CZ1 1315 aa24.85■■□□□ 1.57
SNRPA-210ENST00000601393 SENP3Q9H4L4 574 aaPredicted RBP24.84■■□□□ 1.57
SNRPA-210ENST00000601393 BCANQ96GW7 911 aa24.83■■□□□ 1.57
SNRPA-210ENST00000601393 PTPRUQ92729 1446 aa24.81■■□□□ 1.56
SNRPA-210ENST00000601393 TMEM94Q12767 1356 aa24.78■■□□□ 1.56
SNRPA-210ENST00000601393 UBAP1LF5GYI3 381 aa24.77■■□□□ 1.56
SNRPA-210ENST00000601393 VGFO15240 615 aaPredicted RBP24.77■■□□□ 1.56
SNRPA-210ENST00000601393 METP08581 1390 aa24.76■■□□□ 1.55
SNRPA-210ENST00000601393 MYOM2P54296 1465 aa24.72■■□□□ 1.55
SNRPA-210ENST00000601393 NRXN1Q9ULB1 1477 aa24.72■■□□□ 1.55
SNRPA-210ENST00000601393 RGL3Q3MIN7 710 aa24.72■■□□□ 1.55
SNRPA-210ENST00000601393 PRAG1Q86YV5 1406 aa24.71■■□□□ 1.55
SNRPA-210ENST00000601393 ADGRF5Q8IZF2 1346 aa24.71■■□□□ 1.55
SNRPA-210ENST00000601393 PROSER2Q86WR7 435 aaPredicted RBP24.71■■□□□ 1.55
SNRPA-210ENST00000601393 PIK3C2GO75747 1445 aa24.7■■□□□ 1.55
SNRPA-210ENST00000601393 NCOA3Q9Y6Q9 1424 aa24.7■■□□□ 1.55
SNRPA-210ENST00000601393 TOM1O60784 492 aa24.69■■□□□ 1.54
SNRPA-210ENST00000601393 AMOTL2Q9Y2J4 779 aa24.69■■□□□ 1.54
SNRPA-210ENST00000601393 ASXL1Q8IXJ9 1541 aa24.69■■□□□ 1.54
SNRPA-210ENST00000601393 TRIM26Q12899 539 aaPredicted RBP24.68■■□□□ 1.54
SNRPA-210ENST00000601393 RBM33Q96EV2 1170 aaKnown RBP24.67■■□□□ 1.54
SNRPA-210ENST00000601393 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.66■■□□□ 1.54
SNRPA-210ENST00000601393 LAMC1P11047 1609 aa24.66■■□□□ 1.54
SNRPA-210ENST00000601393 PTCH1Q13635 1447 aa24.64■■□□□ 1.54
SNRPA-210ENST00000601393 KNDC1Q76NI1 1749 aa24.64■■□□□ 1.53
SNRPA-210ENST00000601393 NALCNQ8IZF0 1738 aa24.63■■□□□ 1.53
SNRPA-210ENST00000601393 MSH6P52701 1360 aa24.61■■□□□ 1.53
SNRPA-210ENST00000601393 DHX57Q6P158 1386 aaKnown RBP24.6■■□□□ 1.53
SNRPA-210ENST00000601393 PIP4K2BP78356 416 aa24.59■■□□□ 1.53
SNRPA-210ENST00000601393 ROBO1Q9Y6N7 1651 aa24.58■■□□□ 1.53
SNRPA-210ENST00000601393 TECPR2O15040 1411 aa24.58■■□□□ 1.53
SNRPA-210ENST00000601393 ROBO2Q9HCK4 1378 aa24.56■■□□□ 1.52
SNRPA-210ENST00000601393 DCCP43146 1447 aa24.56■■□□□ 1.52
SNRPA-210ENST00000601393 FAM135BQ49AJ0 1406 aa24.55■■□□□ 1.52
SNRPA-210ENST00000601393 ADGRL3Q9HAR2 1447 aa24.55■■□□□ 1.52
SNRPA-210ENST00000601393 C14orf93Q9H972 538 aaKnown RBP24.54■■□□□ 1.52
SNRPA-210ENST00000601393 SCAF1Q9H7N4 1312 aaKnown RBP24.54■■□□□ 1.52
SNRPA-210ENST00000601393 LRPPRCP42704 1394 aaKnown RBP24.54■■□□□ 1.52
SNRPA-210ENST00000601393 ADGRB1O14514 1584 aa24.53■■□□□ 1.52
SNRPA-210ENST00000601393 C19orf44Q9H6X5 657 aa24.52■■□□□ 1.52
SNRPA-210ENST00000601393 HSPA1LP34931 641 aa24.51■■□□□ 1.51
SNRPA-210ENST00000601393 ABCC11Q96J66 1382 aa24.51■■□□□ 1.51
SNRPA-210ENST00000601393 YTHDC2Q9H6S0 1430 aaKnown RBP24.51■■□□□ 1.51
SNRPA-210ENST00000601393 STAC3Q96MF2 364 aa24.5■■□□□ 1.51
SNRPA-210ENST00000601393 CFAP70Q5T0N1 1121 aa24.49■■□□□ 1.51
SNRPA-210ENST00000601393 DCAF11Q8TEB1 546 aa24.48■■□□□ 1.51
SNRPA-210ENST00000601393 KIAA1210Q9ULL0 1709 aa24.48■■□□□ 1.51
SNRPA-210ENST00000601393 TMEM132EQ6IEE7 984 aa24.47■■□□□ 1.51
SNRPA-210ENST00000601393 C14orf37Q86TY3 774 aa24.47■■□□□ 1.51
SNRPA-210ENST00000601393 SLAIN2Q9P270 581 aa24.47■■□□□ 1.51
SNRPA-210ENST00000601393 MST1RQ04912 1400 aa24.46■■□□□ 1.51
SNRPA-210ENST00000601393 CADPS2Q86UW7 1296 aa24.46■■□□□ 1.51
SNRPA-210ENST00000601393 CDC42BPGQ6DT37 1551 aa24.45■■□□□ 1.5
SNRPA-210ENST00000601393 DLC1Q96QB1 1528 aa24.45■■□□□ 1.5
SNRPA-210ENST00000601393 KDM2AQ9Y2K7 1162 aa24.43■■□□□ 1.5
SNRPA-210ENST00000601393 ATF3P18847 181 aa24.42■■□□□ 1.5
SNRPA-210ENST00000601393 AHDC1Q5TGY3 1603 aaPredicted RBP24.42■■□□□ 1.5
SNRPA-210ENST00000601393 PHLPP1O60346 1717 aa24.41■■□□□ 1.5
SNRPA-210ENST00000601393 SIN3AQ96ST3 1273 aa24.41■■□□□ 1.5
SNRPA-210ENST00000601393 PLEKHH1Q9ULM0 1364 aa24.41■■□□□ 1.5
SNRPA-210ENST00000601393 COL16A1Q07092 1604 aaPredicted RBP24.4■■□□□ 1.5
SNRPA-210ENST00000601393 NHSL1Q5SYE7 1610 aa24.4■■□□□ 1.5
SNRPA-210ENST00000601393 SIRT1Q96EB6 747 aa24.4■■□□□ 1.5
SNRPA-210ENST00000601393 STK26Q9P289 416 aa24.4■■□□□ 1.5
SNRPA-210ENST00000601393 ARHGEF28Q8N1W1 1705 aaKnown RBP24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms