RNA–Protein interactions for RNA: ENST00000600932.5

COPE-211, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 5 BASIC

Gene COPE, Length 1,144 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-211ENST00000600932 PCGF6Q9BYE7 350 aa25.83■■□□□ 1.73
COPE-211ENST00000600932 HRCP23327 699 aa25.82■■□□□ 1.72
COPE-211ENST00000600932 MPHOSPH9Q99550 1183 aa25.81■■□□□ 1.72
COPE-211ENST00000600932 ALKQ9UM73 1620 aa25.79■■□□□ 1.72
COPE-211ENST00000600932 XIRP1Q702N8 1843 aaKnown RBP25.79■■□□□ 1.72
COPE-211ENST00000600932 ZFYVE9O95405 1425 aa25.79■■□□□ 1.72
COPE-211ENST00000600932 SPHKAPQ2M3C7 1700 aa25.78■■□□□ 1.72
COPE-211ENST00000600932 TOM1O60784 492 aa25.77■■□□□ 1.72
COPE-211ENST00000600932 FOXD1Q16676 465 aa25.77■■□□□ 1.72
COPE-211ENST00000600932 RIMS2Q9UQ26 1411 aa25.75■■□□□ 1.71
COPE-211ENST00000600932 NWD1Q149M9 1564 aa25.73■■□□□ 1.71
COPE-211ENST00000600932 SCAF1Q9H7N4 1312 aaKnown RBP25.71■■□□□ 1.71
COPE-211ENST00000600932 PIP4K2BP78356 416 aa25.71■■□□□ 1.71
COPE-211ENST00000600932 PLEKHG1Q9ULL1 1385 aa25.7■■□□□ 1.71
COPE-211ENST00000600932 SLC26A8Q96RN1 970 aa25.69■■□□□ 1.7
COPE-211ENST00000600932 CHGAP10645 457 aaKnown RBP25.68■■□□□ 1.7
COPE-211ENST00000600932 HDGFP51858 240 aaKnown RBP25.67■■□□□ 1.7
COPE-211ENST00000600932 NKTRP30414 1462 aaKnown RBP25.66■■□□□ 1.7
COPE-211ENST00000600932 CHD2O14647 1828 aaKnown RBP25.66■■□□□ 1.7
COPE-211ENST00000600932 PPP1R15AO75807 674 aaPredicted RBP25.66■■□□□ 1.7
COPE-211ENST00000600932 KCNA6P17658 529 aa25.66■■□□□ 1.7
COPE-211ENST00000600932 DISP3Q9P2K9 1392 aa25.65■■□□□ 1.7
COPE-211ENST00000600932 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.64■■□□□ 1.7
COPE-211ENST00000600932 BCANQ96GW7 911 aa25.64■■□□□ 1.7
COPE-211ENST00000600932 DIP2AQ14689 1571 aa25.64■■□□□ 1.69
COPE-211ENST00000600932 TRPM2O94759 1503 aa25.63■■□□□ 1.69
COPE-211ENST00000600932 CLTCL1P53675 1640 aa25.63■■□□□ 1.69
COPE-211ENST00000600932 HSPA1LP34931 641 aa25.62■■□□□ 1.69
COPE-211ENST00000600932 TMEM94Q12767 1356 aa25.6■■□□□ 1.69
COPE-211ENST00000600932 KIF1BO60333 1816 aa25.59■■□□□ 1.69
COPE-211ENST00000600932 ADAMTS13Q76LX8 1427 aa25.58■■□□□ 1.69
COPE-211ENST00000600932 SENP3Q9H4L4 574 aaPredicted RBP25.58■■□□□ 1.69
COPE-211ENST00000600932 TBX22Q9Y458 520 aa25.56■■□□□ 1.68
COPE-211ENST00000600932 NUTM2DQ5VT03 806 aaPredicted RBP25.55■■□□□ 1.68
COPE-211ENST00000600932 PROSER2Q86WR7 435 aaPredicted RBP25.55■■□□□ 1.68
COPE-211ENST00000600932 NRXN3Q9Y4C0 1643 aa25.54■■□□□ 1.68
COPE-211ENST00000600932 SETBP1Q9Y6X0 1596 aa25.53■■□□□ 1.68
COPE-211ENST00000600932 PIK3R4Q99570 1358 aa25.52■■□□□ 1.68
COPE-211ENST00000600932 CCDC144AA2RUR9 1427 aa25.52■■□□□ 1.68
COPE-211ENST00000600932 NEXMIFQ5QGS0 1516 aa25.51■■□□□ 1.67
COPE-211ENST00000600932 MED1Q15648 1581 aaPredicted RBP25.51■■□□□ 1.67
COPE-211ENST00000600932 ZNF326Q5BKZ1 582 aaKnown RBP25.5■■□□□ 1.67
COPE-211ENST00000600932 ANKRD30BQ9BXX2 1392 aa25.5■■□□□ 1.67
COPE-211ENST00000600932 RBM33Q96EV2 1170 aaKnown RBP25.49■■□□□ 1.67
COPE-211ENST00000600932 MSH6P52701 1360 aa25.47■■□□□ 1.67
COPE-211ENST00000600932 DHX57Q6P158 1386 aaKnown RBP25.47■■□□□ 1.67
COPE-211ENST00000600932 ROBO1Q9Y6N7 1651 aa25.47■■□□□ 1.67
COPE-211ENST00000600932 FAM135BQ49AJ0 1406 aa25.46■■□□□ 1.67
COPE-211ENST00000600932 RGL3Q3MIN7 710 aa25.45■■□□□ 1.66
COPE-211ENST00000600932 XRN1Q8IZH2 1706 aaKnown RBP25.45■■□□□ 1.66
COPE-211ENST00000600932 NCOA3Q9Y6Q9 1424 aa25.45■■□□□ 1.66
COPE-211ENST00000600932 ILDR2Q71H61 639 aa25.43■■□□□ 1.66
COPE-211ENST00000600932 PTPRUQ92729 1446 aa25.43■■□□□ 1.66
COPE-211ENST00000600932 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.4■■□□□ 1.66
COPE-211ENST00000600932 PPLO60437 1756 aa25.4■■□□□ 1.66
COPE-211ENST00000600932 SETD1AO15047 1707 aaKnown RBP25.37■■□□□ 1.65
COPE-211ENST00000600932 AMOTL2Q9Y2J4 779 aa25.37■■□□□ 1.65
COPE-211ENST00000600932 SIN3AQ96ST3 1273 aa25.36■■□□□ 1.65
COPE-211ENST00000600932 NEUROD1Q13562 356 aa25.35■■□□□ 1.65
COPE-211ENST00000600932 METP08581 1390 aa25.34■■□□□ 1.65
COPE-211ENST00000600932 SPATA31E1Q6ZUB1 1445 aa25.34■■□□□ 1.65
COPE-211ENST00000600932 PHLPP1O60346 1717 aa25.33■■□□□ 1.65
COPE-211ENST00000600932 C14orf37Q86TY3 774 aa25.33■■□□□ 1.65
COPE-211ENST00000600932 SLAIN2Q9P270 581 aa25.33■■□□□ 1.65
COPE-211ENST00000600932 RPGRIP1LQ68CZ1 1315 aa25.33■■□□□ 1.64
COPE-211ENST00000600932 IFT172Q9UG01 1749 aa25.3■■□□□ 1.64
COPE-211ENST00000600932 C19orf44Q9H6X5 657 aa25.3■■□□□ 1.64
COPE-211ENST00000600932 SOCS7O14512 581 aa25.29■■□□□ 1.64
COPE-211ENST00000600932 VGFO15240 615 aaPredicted RBP25.29■■□□□ 1.64
COPE-211ENST00000600932 CCER1Q8TC90 406 aaPredicted RBP25.29■■□□□ 1.64
COPE-211ENST00000600932 DCCP43146 1447 aa25.29■■□□□ 1.64
COPE-211ENST00000600932 CADPS2Q86UW7 1296 aa25.28■■□□□ 1.64
COPE-211ENST00000600932 NALCNQ8IZF0 1738 aa25.26■■□□□ 1.63
COPE-211ENST00000600932 ATF3P18847 181 aa25.26■■□□□ 1.63
COPE-211ENST00000600932 KDM2AQ9Y2K7 1162 aa25.25■■□□□ 1.63
COPE-211ENST00000600932 COL16A1Q07092 1604 aaPredicted RBP25.25■■□□□ 1.63
COPE-211ENST00000600932 DCAF11Q8TEB1 546 aa25.24■■□□□ 1.63
COPE-211ENST00000600932 AHDC1Q5TGY3 1603 aaPredicted RBP25.23■■□□□ 1.63
COPE-211ENST00000600932 PHF23Q9BUL5 403 aaPredicted RBP25.23■■□□□ 1.63
COPE-211ENST00000600932 PTCH1Q13635 1447 aa25.22■■□□□ 1.63
COPE-211ENST00000600932 PRAG1Q86YV5 1406 aa25.22■■□□□ 1.63
COPE-211ENST00000600932 ADGRL3Q9HAR2 1447 aa25.22■■□□□ 1.63
COPE-211ENST00000600932 ADGRF5Q8IZF2 1346 aa25.21■■□□□ 1.63
COPE-211ENST00000600932 MST1RQ04912 1400 aa25.18■■□□□ 1.62
COPE-211ENST00000600932 L3MBTL2Q969R5 705 aa25.17■■□□□ 1.62
COPE-211ENST00000600932 ASXL1Q8IXJ9 1541 aa25.16■■□□□ 1.62
COPE-211ENST00000600932 JCADQ9P266 1359 aa25.16■■□□□ 1.62
COPE-211ENST00000600932 ROBO2Q9HCK4 1378 aa25.15■■□□□ 1.62
COPE-211ENST00000600932 NHSL1Q5SYE7 1610 aa25.15■■□□□ 1.62
COPE-211ENST00000600932 SHPRHQ149N8 1683 aa25.13■■□□□ 1.61
COPE-211ENST00000600932 BRINP3Q76B58 766 aa25.13■■□□□ 1.61
COPE-211ENST00000600932 CLSPNQ9HAW4 1339 aa25.12■■□□□ 1.61
COPE-211ENST00000600932 TONSLQ96HA7 1378 aa25.11■■□□□ 1.61
COPE-211ENST00000600932 STAC3Q96MF2 364 aa25.11■■□□□ 1.61
COPE-211ENST00000600932 KNDC1Q76NI1 1749 aa25.11■■□□□ 1.61
COPE-211ENST00000600932 PIK3C2GO75747 1445 aa25.11■■□□□ 1.61
COPE-211ENST00000600932 MYOM2P54296 1465 aa25.09■■□□□ 1.61
COPE-211ENST00000600932 CFAP70Q5T0N1 1121 aa25.07■■□□□ 1.6
COPE-211ENST00000600932 LAMC1P11047 1609 aa25.07■■□□□ 1.6
COPE-211ENST00000600932 TECPR2O15040 1411 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms