RNA–Protein interactions for RNA: ENST00000600231.5

GRAMD1A-212, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 2,534 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-212ENST00000600231 NLRP13Q86W25 1043 aa29.28■■■□□ 2.28
GRAMD1A-212ENST00000600231 LRPPRCP42704 1394 aaKnown RBP29.27■■■□□ 2.28
GRAMD1A-212ENST00000600231 CC2D1BQ5T0F9 858 aaKnown RBP29.27■■■□□ 2.28
GRAMD1A-212ENST00000600231 MROH2AA6NES4 1674 aa29.27■■■□□ 2.28
GRAMD1A-212ENST00000600231 CHGAP10645 457 aaKnown RBP29.25■■■□□ 2.27
GRAMD1A-212ENST00000600231 SENP3-EIF4A1A0A087X0R7 540 aa29.25■■■□□ 2.27
GRAMD1A-212ENST00000600231 IFT172Q9UG01 1749 aa29.23■■■□□ 2.27
GRAMD1A-212ENST00000600231 ABCC3O15438 1527 aa29.23■■■□□ 2.27
GRAMD1A-212ENST00000600231 EIF3AQ14152 1382 aaKnown RBP29.22■■■□□ 2.27
GRAMD1A-212ENST00000600231 DIP2CQ9Y2E4 1556 aa29.22■■■□□ 2.27
GRAMD1A-212ENST00000600231 ADGRB3O60242 1522 aa29.21■■■□□ 2.27
GRAMD1A-212ENST00000600231 RICTORQ6R327 1708 aa29.21■■■□□ 2.27
GRAMD1A-212ENST00000600231 CDCA8Q53HL2 280 aa29.21■■■□□ 2.27
GRAMD1A-212ENST00000600231 NOS1P29475 1434 aa29.2■■■□□ 2.26
GRAMD1A-212ENST00000600231 NRXN1Q9ULB1 1477 aa29.18■■■□□ 2.26
GRAMD1A-212ENST00000600231 TSHZ2Q9NRE2 1034 aa29.18■■■□□ 2.26
GRAMD1A-212ENST00000600231 SMG6Q86US8 1419 aaKnown RBP29.17■■■□□ 2.26
GRAMD1A-212ENST00000600231 RIMBP3CA6NJZ7 1639 aa29.16■■■□□ 2.26
GRAMD1A-212ENST00000600231 RIMBP3BA6NNM3 1639 aa29.16■■■□□ 2.26
GRAMD1A-212ENST00000600231 RIMBP3Q9UFD9 1639 aa29.16■■■□□ 2.26
GRAMD1A-212ENST00000600231 YEATS2Q9ULM3 1422 aa29.16■■■□□ 2.26
GRAMD1A-212ENST00000600231 GLI2P10070 1586 aa29.15■■■□□ 2.26
GRAMD1A-212ENST00000600231 NUDCQ9Y266 331 aa29.14■■■□□ 2.26
GRAMD1A-212ENST00000600231 CAMSAP1Q5T5Y3 1602 aa29.14■■■□□ 2.26
GRAMD1A-212ENST00000600231 FAM69CQ0P6D2 419 aa29.13■■■□□ 2.25
GRAMD1A-212ENST00000600231 KNSTRNQ9Y448 316 aa29.13■■■□□ 2.25
GRAMD1A-212ENST00000600231 SIGLEC1Q9BZZ2 1709 aa29.11■■■□□ 2.25
GRAMD1A-212ENST00000600231 ERICH6BQ5W0A0 696 aa29.11■■■□□ 2.25
GRAMD1A-212ENST00000600231 SYNMO15061 1565 aa29.1■■■□□ 2.25
GRAMD1A-212ENST00000600231 PPLO60437 1756 aa29.09■■■□□ 2.25
GRAMD1A-212ENST00000600231 AMER1Q5JTC6 1135 aaPredicted RBP29.08■■■□□ 2.25
GRAMD1A-212ENST00000600231 PIK3C2GO75747 1445 aa29.07■■■□□ 2.24
GRAMD1A-212ENST00000600231 SLC24A1O60721 1099 aa29.07■■■□□ 2.24
GRAMD1A-212ENST00000600231 RPGRIP1LQ68CZ1 1315 aa29.06■■■□□ 2.24
GRAMD1A-212ENST00000600231 C14orf93Q9H972 538 aaKnown RBP29.06■■■□□ 2.24
GRAMD1A-212ENST00000600231 MYOM1P52179 1685 aa29.06■■■□□ 2.24
GRAMD1A-212ENST00000600231 ERVK-7P63135 1459 aa29.06■■■□□ 2.24
GRAMD1A-212ENST00000600231 KDM5AP29375 1690 aaKnown RBP29.04■■■□□ 2.24
GRAMD1A-212ENST00000600231 ARHGAP31Q2M1Z3 1444 aa29.03■■■□□ 2.24
GRAMD1A-212ENST00000600231 SETBP1Q9Y6X0 1596 aa29.03■■■□□ 2.24
GRAMD1A-212ENST00000600231 DIP2BQ9P265 1576 aa29.03■■■□□ 2.24
GRAMD1A-212ENST00000600231 PIK3C2BO00750 1634 aa29.01■■■□□ 2.24
GRAMD1A-212ENST00000600231 PPP4R2Q9NY27 417 aa29.01■■■□□ 2.23
GRAMD1A-212ENST00000600231 TRAK1Q9UPV9 953 aa29.01■■■□□ 2.23
GRAMD1A-212ENST00000600231 SALL2Q9Y467 1007 aaPredicted RBP29.01■■■□□ 2.23
GRAMD1A-212ENST00000600231 TMEM132EQ6IEE7 984 aa29■■■□□ 2.23
GRAMD1A-212ENST00000600231 IDI1Q13907 227 aa28.99■■■□□ 2.23
GRAMD1A-212ENST00000600231 NUTM2DQ5VT03 806 aaPredicted RBP28.99■■■□□ 2.23
GRAMD1A-212ENST00000600231 CENPJQ9HC77 1338 aaPredicted RBP28.99■■■□□ 2.23
GRAMD1A-212ENST00000600231 ASXL1Q8IXJ9 1541 aa28.99■■■□□ 2.23
GRAMD1A-212ENST00000600231 PPP2R1AP30153 589 aa28.99■■■□□ 2.23
GRAMD1A-212ENST00000600231 ZC3H13Q5T200 1668 aaKnown RBP28.99■■■□□ 2.23
GRAMD1A-212ENST00000600231 MYO3AQ8NEV4 1616 aa28.99■■■□□ 2.23
GRAMD1A-212ENST00000600231 SBNO2Q9Y2G9 1366 aa28.98■■■□□ 2.23
GRAMD1A-212ENST00000600231 ADGRB1O14514 1584 aa28.97■■■□□ 2.23
GRAMD1A-212ENST00000600231 TSPOAP1O95153 1857 aa28.97■■■□□ 2.23
GRAMD1A-212ENST00000600231 ZMYM4Q5VZL5 1548 aa28.96■■■□□ 2.23
GRAMD1A-212ENST00000600231 RNF123Q5XPI4 1314 aa28.96■■■□□ 2.23
GRAMD1A-212ENST00000600231 VGFO15240 615 aaPredicted RBP28.94■■■□□ 2.22
GRAMD1A-212ENST00000600231 NPC1L1Q9UHC9 1359 aa28.94■■■□□ 2.22
GRAMD1A-212ENST00000600231 SLC52A1Q9NWF4 448 aa28.93■■■□□ 2.22
GRAMD1A-212ENST00000600231 INSRP06213 1382 aa28.93■■■□□ 2.22
GRAMD1A-212ENST00000600231 BLMP54132 1417 aaPredicted RBP28.92■■■□□ 2.22
GRAMD1A-212ENST00000600231 NEXMIFQ5QGS0 1516 aa28.92■■■□□ 2.22
GRAMD1A-212ENST00000600231 CARD14Q9BXL6 1004 aa28.91■■■□□ 2.22
GRAMD1A-212ENST00000600231 ADAMTS8Q9UP79 889 aa28.9■■■□□ 2.22
GRAMD1A-212ENST00000600231 PDE3BQ13370 1112 aa28.88■■■□□ 2.21
GRAMD1A-212ENST00000600231 B4GALNT3Q6L9W6 998 aa28.87■■■□□ 2.21
GRAMD1A-212ENST00000600231 PREX1Q8TCU6 1659 aa28.86■■■□□ 2.21
GRAMD1A-212ENST00000600231 FBXO31Q5XUX0 539 aaPredicted RBP28.86■■■□□ 2.21
GRAMD1A-212ENST00000600231 QRICH2Q9H0J4 1663 aa28.85■■■□□ 2.21
GRAMD1A-212ENST00000600231 CDCA7LQ96GN5 454 aa28.84■■■□□ 2.21
GRAMD1A-212ENST00000600231 MYO5BQ9ULV0 1848 aa28.82■■■□□ 2.2
GRAMD1A-212ENST00000600231 WDR43Q15061 677 aaKnown RBP eCLIP28.82■■■□□ 2.2
GRAMD1A-212ENST00000600231 SENP3Q9H4L4 574 aaPredicted RBP28.81■■■□□ 2.2
GRAMD1A-212ENST00000600231 ZFYVE9O95405 1425 aa28.81■■■□□ 2.2
GRAMD1A-212ENST00000600231 SLC12A5Q9H2X9 1139 aa28.8■■■□□ 2.2
GRAMD1A-212ENST00000600231 TMEM131LA2VDJ0 1609 aa28.8■■■□□ 2.2
GRAMD1A-212ENST00000600231 RCAN3Q9UKA8 241 aa28.77■■■□□ 2.2
GRAMD1A-212ENST00000600231 REREQ9P2R6 1566 aa28.76■■■□□ 2.19
GRAMD1A-212ENST00000600231 ARHGEF28Q8N1W1 1705 aaKnown RBP28.75■■■□□ 2.19
GRAMD1A-212ENST00000600231 AGLP35573 1532 aa28.75■■■□□ 2.19
GRAMD1A-212ENST00000600231 RBM19Q9Y4C8 960 aaKnown RBP28.74■■■□□ 2.19
GRAMD1A-212ENST00000600231 PPP6R1Q9UPN7 881 aa28.73■■■□□ 2.19
GRAMD1A-212ENST00000600231 NSD3Q9BZ95 1437 aa28.73■■■□□ 2.19
GRAMD1A-212ENST00000600231 RRP1P56182 461 aaKnown RBP28.72■■■□□ 2.19
GRAMD1A-212ENST00000600231 STK26Q9P289 416 aa28.72■■■□□ 2.19
GRAMD1A-212ENST00000600231 EVC2Q86UK5 1308 aa28.72■■■□□ 2.19
GRAMD1A-212ENST00000600231 SAFB2Q14151 953 aaKnown RBP eCLIP28.71■■■□□ 2.19
GRAMD1A-212ENST00000600231 MLECQ14165 292 aa28.7■■■□□ 2.19
GRAMD1A-212ENST00000600231 TULP4Q9NRJ4 1543 aa28.69■■■□□ 2.18
GRAMD1A-212ENST00000600231 STAG3Q9UJ98 1225 aa28.68■■■□□ 2.18
GRAMD1A-212ENST00000600231 PLEKHH1Q9ULM0 1364 aa28.68■■■□□ 2.18
GRAMD1A-212ENST00000600231 PUS7Q96PZ0 661 aaKnown RBP28.68■■■□□ 2.18
GRAMD1A-212ENST00000600231 CLTCQ00610 1675 aaKnown RBP28.67■■■□□ 2.18
GRAMD1A-212ENST00000600231 KIF13AQ9H1H9 1805 aa28.66■■■□□ 2.18
GRAMD1A-212ENST00000600231 CABP2Q9NPB3 220 aa28.66■■■□□ 2.18
GRAMD1A-212ENST00000600231 CCDC136Q96JN2 1154 aa28.65■■■□□ 2.18
GRAMD1A-212ENST00000600231 MORC1Q86VD1 984 aa28.64■■■□□ 2.18
GRAMD1A-212ENST00000600231 CCDC146Q8IYE0 955 aa28.64■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms