RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 L3MBTL2Q969R5 705 aa18.32■□□□□ 0.52
CHMP2A-206ENST00000600118 MYO5BQ9ULV0 1848 aa18.31■□□□□ 0.52
CHMP2A-206ENST00000600118 TIMELESSQ9UNS1 1208 aa18.31■□□□□ 0.52
CHMP2A-206ENST00000600118 LTKP29376 864 aa18.3■□□□□ 0.52
CHMP2A-206ENST00000600118 TONSLQ96HA7 1378 aa18.3■□□□□ 0.52
CHMP2A-206ENST00000600118 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.29■□□□□ 0.52
CHMP2A-206ENST00000600118 STAC3Q96MF2 364 aa18.29■□□□□ 0.52
CHMP2A-206ENST00000600118 MYOM2P54296 1465 aa18.28■□□□□ 0.52
CHMP2A-206ENST00000600118 SCAF11Q99590 1463 aaKnown RBP18.28■□□□□ 0.52
CHMP2A-206ENST00000600118 HDGFP51858 240 aaKnown RBP18.28■□□□□ 0.52
CHMP2A-206ENST00000600118 TXNDC2Q86VQ3 553 aa18.28■□□□□ 0.52
CHMP2A-206ENST00000600118 ANKLE2Q86XL3 938 aa18.28■□□□□ 0.52
CHMP2A-206ENST00000600118 VGFO15240 615 aaPredicted RBP18.27■□□□□ 0.52
CHMP2A-206ENST00000600118 DCAF11Q8TEB1 546 aa18.27■□□□□ 0.52
CHMP2A-206ENST00000600118 EID1Q9Y6B2 187 aa18.27■□□□□ 0.52
CHMP2A-206ENST00000600118 NRXN1Q9ULB1 1477 aa18.26■□□□□ 0.51
CHMP2A-206ENST00000600118 IFT172Q9UG01 1749 aa18.26■□□□□ 0.51
CHMP2A-206ENST00000600118 PPLO60437 1756 aa18.26■□□□□ 0.51
CHMP2A-206ENST00000600118 ADGRF5Q8IZF2 1346 aa18.25■□□□□ 0.51
CHMP2A-206ENST00000600118 NUTM2DQ5VT03 806 aaPredicted RBP18.25■□□□□ 0.51
CHMP2A-206ENST00000600118 MED14O60244 1454 aa18.25■□□□□ 0.51
CHMP2A-206ENST00000600118 PLEKHG1Q9ULL1 1385 aa18.24■□□□□ 0.51
CHMP2A-206ENST00000600118 NCKAP5LQ9HCH0 1330 aa18.23■□□□□ 0.51
CHMP2A-206ENST00000600118 PPP1R15AO75807 674 aaPredicted RBP18.23■□□□□ 0.51
CHMP2A-206ENST00000600118 KDM2AQ9Y2K7 1162 aa18.22■□□□□ 0.51
CHMP2A-206ENST00000600118 PIK3C2GO75747 1445 aa18.22■□□□□ 0.51
CHMP2A-206ENST00000600118 NPHP4O75161 1426 aaPredicted RBP18.21■□□□□ 0.51
CHMP2A-206ENST00000600118 PRAG1Q86YV5 1406 aa18.21■□□□□ 0.51
CHMP2A-206ENST00000600118 SETBP1Q9Y6X0 1596 aa18.2■□□□□ 0.5
CHMP2A-206ENST00000600118 ADAMTS13Q76LX8 1427 aa18.19■□□□□ 0.5
CHMP2A-206ENST00000600118 STRCQ7RTU9 1775 aa18.19■□□□□ 0.5
CHMP2A-206ENST00000600118 POLR1AO95602 1720 aaPredicted RBP18.18■□□□□ 0.5
CHMP2A-206ENST00000600118 NRXN3Q9Y4C0 1643 aa18.17■□□□□ 0.5
CHMP2A-206ENST00000600118 NBPF8Q3BBV2 869 aa18.17■□□□□ 0.5
CHMP2A-206ENST00000600118 C14orf93Q9H972 538 aaKnown RBP18.16■□□□□ 0.5
CHMP2A-206ENST00000600118 TBX22Q9Y458 520 aa18.15■□□□□ 0.5
CHMP2A-206ENST00000600118 IQGAP1P46940 1657 aa18.14■□□□□ 0.49
CHMP2A-206ENST00000600118 ALKQ9UM73 1620 aa18.13■□□□□ 0.49
CHMP2A-206ENST00000600118 CFAP70Q5T0N1 1121 aa18.13■□□□□ 0.49
CHMP2A-206ENST00000600118 SLC26A8Q96RN1 970 aa18.13■□□□□ 0.49
CHMP2A-206ENST00000600118 SENP3Q9H4L4 574 aaPredicted RBP18.13■□□□□ 0.49
CHMP2A-206ENST00000600118 BCANQ96GW7 911 aa18.12■□□□□ 0.49
CHMP2A-206ENST00000600118 DMRT2Q9Y5R5 561 aa18.12■□□□□ 0.49
CHMP2A-206ENST00000600118 DIP2AQ14689 1571 aa18.12■□□□□ 0.49
CHMP2A-206ENST00000600118 METP08581 1390 aa18.1■□□□□ 0.49
CHMP2A-206ENST00000600118 SETD1AO15047 1707 aaKnown RBP18.09■□□□□ 0.49
CHMP2A-206ENST00000600118 ASXL1Q8IXJ9 1541 aa18.09■□□□□ 0.49
CHMP2A-206ENST00000600118 PIK3R4Q99570 1358 aa18.09■□□□□ 0.49
CHMP2A-206ENST00000600118 ZEB1P37275 1124 aaPredicted RBP18.09■□□□□ 0.49
CHMP2A-206ENST00000600118 LAMC1P11047 1609 aa18.09■□□□□ 0.49
CHMP2A-206ENST00000600118 ADGRB1O14514 1584 aa18.08■□□□□ 0.49
CHMP2A-206ENST00000600118 RALGAPBQ86X10 1494 aa18.08■□□□□ 0.49
CHMP2A-206ENST00000600118 NBPF1Q3BBV0 1214 aa18.08■□□□□ 0.48
CHMP2A-206ENST00000600118 KIAA1210Q9ULL0 1709 aa18.08■□□□□ 0.48
CHMP2A-206ENST00000600118 GPRASP1Q5JY77 1395 aa18.07■□□□□ 0.48
CHMP2A-206ENST00000600118 TRPM1Q7Z4N2 1603 aa18.07■□□□□ 0.48
CHMP2A-206ENST00000600118 TMEM132EQ6IEE7 984 aa18.06■□□□□ 0.48
CHMP2A-206ENST00000600118 PTPRUQ92729 1446 aa18.05■□□□□ 0.48
CHMP2A-206ENST00000600118 ROCK2O75116 1388 aaKnown RBP18.04■□□□□ 0.48
CHMP2A-206ENST00000600118 LRPPRCP42704 1394 aaKnown RBP18.04■□□□□ 0.48
CHMP2A-206ENST00000600118 ABCC11Q96J66 1382 aa18.03■□□□□ 0.48
CHMP2A-206ENST00000600118 TECPR2O15040 1411 aa18.02■□□□□ 0.48
CHMP2A-206ENST00000600118 KCNA6P17658 529 aa18.02■□□□□ 0.48
CHMP2A-206ENST00000600118 YTHDC2Q9H6S0 1430 aaKnown RBP18.02■□□□□ 0.48
CHMP2A-206ENST00000600118 NWD1Q149M9 1564 aa18■□□□□ 0.47
CHMP2A-206ENST00000600118 AMOTL2Q9Y2J4 779 aa18■□□□□ 0.47
CHMP2A-206ENST00000600118 XRN1Q8IZH2 1706 aaKnown RBP17.99■□□□□ 0.47
CHMP2A-206ENST00000600118 ZNF335Q9H4Z2 1342 aaPredicted RBP17.98■□□□□ 0.47
CHMP2A-206ENST00000600118 CARD11Q9BXL7 1154 aa17.98■□□□□ 0.47
CHMP2A-206ENST00000600118 SIRT1Q96EB6 747 aa17.97■□□□□ 0.47
CHMP2A-206ENST00000600118 STK26Q9P289 416 aa17.97■□□□□ 0.47
CHMP2A-206ENST00000600118 CHD2O14647 1828 aaKnown RBP17.97■□□□□ 0.47
CHMP2A-206ENST00000600118 DLC1Q96QB1 1528 aa17.97■□□□□ 0.47
CHMP2A-206ENST00000600118 PTCH1Q13635 1447 aa17.97■□□□□ 0.47
CHMP2A-206ENST00000600118 NKTRP30414 1462 aaKnown RBP17.96■□□□□ 0.47
CHMP2A-206ENST00000600118 ROBO2Q9HCK4 1378 aa17.96■□□□□ 0.47
CHMP2A-206ENST00000600118 CPS1P31327 1500 aa17.95■□□□□ 0.46
CHMP2A-206ENST00000600118 TRAK1Q9UPV9 953 aa17.95■□□□□ 0.46
CHMP2A-206ENST00000600118 FAM135BQ49AJ0 1406 aa17.95■□□□□ 0.46
CHMP2A-206ENST00000600118 KNDC1Q76NI1 1749 aa17.94■□□□□ 0.46
CHMP2A-206ENST00000600118 STRCP1A6NGW2 1772 aa17.94■□□□□ 0.46
CHMP2A-206ENST00000600118 LTBP4Q8N2S1 1624 aa17.93■□□□□ 0.46
CHMP2A-206ENST00000600118 USP47Q96K76 1375 aa17.91■□□□□ 0.46
CHMP2A-206ENST00000600118 PLEKHH1Q9ULM0 1364 aa17.91■□□□□ 0.46
CHMP2A-206ENST00000600118 WAPLQ7Z5K2 1190 aa17.9■□□□□ 0.46
CHMP2A-206ENST00000600118 PRAM1Q96QH2 718 aa17.9■□□□□ 0.46
CHMP2A-206ENST00000600118 EIF3AQ14152 1382 aaKnown RBP17.9■□□□□ 0.46
CHMP2A-206ENST00000600118 LRRC7Q96NW7 1537 aa17.89■□□□□ 0.45
CHMP2A-206ENST00000600118 PROSER2Q86WR7 435 aaPredicted RBP17.89■□□□□ 0.45
CHMP2A-206ENST00000600118 ARHGEF28Q8N1W1 1705 aaKnown RBP17.89■□□□□ 0.45
CHMP2A-206ENST00000600118 TMEM94Q12767 1356 aa17.88■□□□□ 0.45
CHMP2A-206ENST00000600118 NCOA3Q9Y6Q9 1424 aa17.88■□□□□ 0.45
CHMP2A-206ENST00000600118 POGKQ9P215 609 aa17.87■□□□□ 0.45
CHMP2A-206ENST00000600118 CENPJQ9HC77 1338 aaPredicted RBP17.87■□□□□ 0.45
CHMP2A-206ENST00000600118 ST20-MTHFSA0A0A6YYL1 179 aa17.86■□□□□ 0.45
CHMP2A-206ENST00000600118 EIF4G2P78344 907 aaKnown RBP eCLIP17.86■□□□□ 0.45
CHMP2A-206ENST00000600118 RBM33Q96EV2 1170 aaKnown RBP17.85■□□□□ 0.45
CHMP2A-206ENST00000600118 SBNO2Q9Y2G9 1366 aa17.85■□□□□ 0.45
CHMP2A-206ENST00000600118 HSPA5P11021 654 aaKnown RBP17.84■□□□□ 0.45
CHMP2A-206ENST00000600118 TESK2Q96S53 571 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 864.7 ms