RNA–Protein interactions for RNA: ENST00000598706.1

RAB11B-203, Transcript of RAB11B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB11B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11B-203ENST00000598706 KIF15Q9NS87 1388 aa22.5■■□□□ 1.19
RAB11B-203ENST00000598706 BCANQ96GW7 911 aa22.48■■□□□ 1.19
RAB11B-203ENST00000598706 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.48■■□□□ 1.194e-7■■□□□ 13.1
RAB11B-203ENST00000598706 KANK1Q14678 1352 aa22.47■■□□□ 1.19
RAB11B-203ENST00000598706 LMTK2Q8IWU2 1503 aa22.47■■□□□ 1.19
RAB11B-203ENST00000598706 CROCC2H7BZ55 1655 aa22.46■■□□□ 1.19
RAB11B-203ENST00000598706 MYOM3Q5VTT5 1437 aa22.46■■□□□ 1.19
RAB11B-203ENST00000598706 NCOA3Q9Y6Q9 1424 aa22.46■■□□□ 1.19
RAB11B-203ENST00000598706 DIP2AQ14689 1571 aa22.46■■□□□ 1.19
RAB11B-203ENST00000598706 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.45■■□□□ 1.19
RAB11B-203ENST00000598706 RGS12O14924 1447 aa22.43■■□□□ 1.18
RAB11B-203ENST00000598706 NOS1P29475 1434 aa22.43■■□□□ 1.18
RAB11B-203ENST00000598706 MYO5BQ9ULV0 1848 aa22.43■■□□□ 1.18
RAB11B-203ENST00000598706 PLEKHG1Q9ULL1 1385 aa22.42■■□□□ 1.18
RAB11B-203ENST00000598706 AFF2P51816 1311 aa22.42■■□□□ 1.18
RAB11B-203ENST00000598706 NUTM2BA6NNL0 878 aaPredicted RBP22.41■■□□□ 1.18
RAB11B-203ENST00000598706 NUTM2EB1AL46 878 aaPredicted RBP22.41■■□□□ 1.18
RAB11B-203ENST00000598706 C14orf37Q86TY3 774 aa22.41■■□□□ 1.18
RAB11B-203ENST00000598706 NUTM2AQ8IVF1 878 aaPredicted RBP22.41■■□□□ 1.18
RAB11B-203ENST00000598706 ZFYVE9O95405 1425 aa22.4■■□□□ 1.18
RAB11B-203ENST00000598706 CADPS2Q86UW7 1296 aa22.4■■□□□ 1.18
RAB11B-203ENST00000598706 RRP7BPQ9NSQ0 103 aa22.4■■□□□ 1.18
RAB11B-203ENST00000598706 GCC2Q8IWJ2 1684 aa22.37■■□□□ 1.17
RAB11B-203ENST00000598706 ATF3P18847 181 aa22.37■■□□□ 1.17
RAB11B-203ENST00000598706 SLC52A1Q9NWF4 448 aa22.37■■□□□ 1.17
RAB11B-203ENST00000598706 C19orf44Q9H6X5 657 aa22.36■■□□□ 1.17
RAB11B-203ENST00000598706 ABCC5O15440 1437 aa22.35■■□□□ 1.17
RAB11B-203ENST00000598706 RIMS2Q9UQ26 1411 aa22.35■■□□□ 1.17
RAB11B-203ENST00000598706 PPP1R15AO75807 674 aaPredicted RBP22.35■■□□□ 1.17
RAB11B-203ENST00000598706 BRINP3Q76B58 766 aa22.34■■□□□ 1.17
RAB11B-203ENST00000598706 RBM6P78332 1123 aaKnown RBP22.33■■□□□ 1.17
RAB11B-203ENST00000598706 NUTM2DQ5VT03 806 aaPredicted RBP22.33■■□□□ 1.17
RAB11B-203ENST00000598706 TBX22Q9Y458 520 aa22.33■■□□□ 1.17
RAB11B-203ENST00000598706 SETD5Q9C0A6 1442 aa22.31■■□□□ 1.16
RAB11B-203ENST00000598706 ASXL1Q8IXJ9 1541 aa22.31■■□□□ 1.16
RAB11B-203ENST00000598706 TMEM131LA2VDJ0 1609 aa22.31■■□□□ 1.16
RAB11B-203ENST00000598706 NHSL1Q5SYE7 1610 aa22.31■■□□□ 1.16
RAB11B-203ENST00000598706 C8orf37Q96NL8 207 aa22.3■■□□□ 1.16
RAB11B-203ENST00000598706 QTRT2Q9H974 415 aaKnown RBP22.3■■□□□ 1.16
RAB11B-203ENST00000598706 HDGFP51858 240 aaKnown RBP22.29■■□□□ 1.16
RAB11B-203ENST00000598706 ADAMTS13Q76LX8 1427 aa22.29■■□□□ 1.16
RAB11B-203ENST00000598706 RPRD2Q5VT52 1461 aaKnown RBP22.28■■□□□ 1.16
RAB11B-203ENST00000598706 ATAD2Q6PL18 1390 aa22.28■■□□□ 1.16
RAB11B-203ENST00000598706 DAPK1P53355 1430 aa22.28■■□□□ 1.16
RAB11B-203ENST00000598706 PTPN23Q9H3S7 1636 aa22.28■■□□□ 1.16
RAB11B-203ENST00000598706 PIK3R4Q99570 1358 aa22.27■■□□□ 1.16
RAB11B-203ENST00000598706 DCCP43146 1447 aa22.27■■□□□ 1.16
RAB11B-203ENST00000598706 SETBP1Q9Y6X0 1596 aa22.26■■□□□ 1.15
RAB11B-203ENST00000598706 FOXD1Q16676 465 aa22.26■■□□□ 1.15
RAB11B-203ENST00000598706 KANK4Q5T7N3 995 aaPredicted RBP22.26■■□□□ 1.15
RAB11B-203ENST00000598706 ZRANB1Q9UGI0 708 aa22.26■■□□□ 1.15
RAB11B-203ENST00000598706 TRPM2O94759 1503 aa22.24■■□□□ 1.15
RAB11B-203ENST00000598706 EP400Q96L91 3159 aa22.24■■□□□ 1.15
RAB11B-203ENST00000598706 VPS8Q8N3P4 1428 aa22.23■■□□□ 1.15
RAB11B-203ENST00000598706 PNPLA6Q8IY17 1366 aa22.23■■□□□ 1.15
RAB11B-203ENST00000598706 ANKRD30AQ9BXX3 1397 aa22.23■■□□□ 1.15
RAB11B-203ENST00000598706 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.22■■□□□ 1.15
RAB11B-203ENST00000598706 LRRC59Q96AG4 307 aaKnown RBP22.22■■□□□ 1.15
RAB11B-203ENST00000598706 NGLY1Q96IV0 654 aa22.22■■□□□ 1.15
RAB11B-203ENST00000598706 MST1RQ04912 1400 aa22.22■■□□□ 1.15
RAB11B-203ENST00000598706 PTPRUQ92729 1446 aa22.19■■□□□ 1.14
RAB11B-203ENST00000598706 CHIC2Q9UKJ5 165 aa22.18■■□□□ 1.14
RAB11B-203ENST00000598706 AMOTL2Q9Y2J4 779 aa22.18■■□□□ 1.14
RAB11B-203ENST00000598706 XRN1Q8IZH2 1706 aaKnown RBP22.17■■□□□ 1.14
RAB11B-203ENST00000598706 UNC13BO14795 1591 aa22.16■■□□□ 1.14
RAB11B-203ENST00000598706 CHGAP10645 457 aaKnown RBP22.15■■□□□ 1.14
RAB11B-203ENST00000598706 ADAMTS2O95450 1211 aa22.14■■□□□ 1.13
RAB11B-203ENST00000598706 DDX17Q92841 729 aaKnown RBP22.14■■□□□ 1.13
RAB11B-203ENST00000598706 USP21Q9UK80 565 aa22.11■■□□□ 1.13
RAB11B-203ENST00000598706 TRPC5Q9UL62 973 aaPredicted RBP22.11■■□□□ 1.13
RAB11B-203ENST00000598706 ADGRL2O95490 1459 aa22.1■■□□□ 1.13
RAB11B-203ENST00000598706 NRXN3Q9Y4C0 1643 aa22.09■■□□□ 1.13
RAB11B-203ENST00000598706 NALCNQ8IZF0 1738 aa22.09■■□□□ 1.13
RAB11B-203ENST00000598706 E9PCH4 1651 aa22.08■■□□□ 1.13
RAB11B-203ENST00000598706 ATRNO75882 1429 aa22.08■■□□□ 1.13
RAB11B-203ENST00000598706 CCDC125Q86Z20 511 aa22.08■■□□□ 1.13
RAB11B-203ENST00000598706 LAMC1P11047 1609 aa22.08■■□□□ 1.13
RAB11B-203ENST00000598706 ADGRL3Q9HAR2 1447 aa22.07■■□□□ 1.12
RAB11B-203ENST00000598706 ANKRD50Q9ULJ7 1429 aa22.06■■□□□ 1.12
RAB11B-203ENST00000598706 PTCH1Q13635 1447 aa22.06■■□□□ 1.12
RAB11B-203ENST00000598706 FNBP4Q8N3X1 1017 aaPredicted RBP22.04■■□□□ 1.12
RAB11B-203ENST00000598706 LRP5O75197 1615 aa22.03■■□□□ 1.12
RAB11B-203ENST00000598706 COL22A1Q8NFW1 1626 aaPredicted RBP22.01■■□□□ 1.11
RAB11B-203ENST00000598706 C1orf167Q5SNV9 1468 aa22.01■■□□□ 1.11
RAB11B-203ENST00000598706 IQGAP3Q86VI3 1631 aa22■■□□□ 1.11
RAB11B-203ENST00000598706 SOS2Q07890 1332 aaPredicted RBP21.99■■□□□ 1.11
RAB11B-203ENST00000598706 METP08581 1390 aa21.99■■□□□ 1.11
RAB11B-203ENST00000598706 MARF1Q9Y4F3 1742 aaKnown RBP21.98■■□□□ 1.11
RAB11B-203ENST00000598706 BLMP54132 1417 aaPredicted RBP21.96■■□□□ 1.11
RAB11B-203ENST00000598706 BCL9LQ86UU0 1499 aa21.96■■□□□ 1.11
RAB11B-203ENST00000598706 MYOM2P54296 1465 aa21.94■■□□□ 1.1
RAB11B-203ENST00000598706 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.92■■□□□ 1.1
RAB11B-203ENST00000598706 GJD4Q96KN9 370 aaPredicted RBP21.91■■□□□ 1.1
RAB11B-203ENST00000598706 ORAI2Q96SN7 254 aa21.91■■□□□ 1.1
RAB11B-203ENST00000598706 SPHKAPQ2M3C7 1700 aa21.89■■□□□ 1.1
RAB11B-203ENST00000598706 DEFB132Q7Z7B7 95 aa21.89■■□□□ 1.09
RAB11B-203ENST00000598706 BRWD3Q6RI45 1802 aa21.89■■□□□ 1.09
RAB11B-203ENST00000598706 GLI3P10071 1580 aa21.87■■□□□ 1.09
RAB11B-203ENST00000598706 APLP2Q06481 763 aa21.87■■□□□ 1.09
RAB11B-203ENST00000598706 FAM50AQ14320 339 aaKnown RBP21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms