RNA–Protein interactions for RNA: ENST00000597304.5

ZNF558-205, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 2,612 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-205ENST00000597304 SLFN5Q08AF3 891 aa16.31■□□□□ 0.2
ZNF558-205ENST00000597304 JPH4Q96JJ6 628 aa16.31■□□□□ 0.2
ZNF558-205ENST00000597304 RSPH4AQ5TD94 716 aa16.3■□□□□ 0.2
ZNF558-205ENST00000597304 NKTRP30414 1462 aaKnown RBP16.29■□□□□ 0.2
ZNF558-205ENST00000597304 SYNMO15061 1565 aa16.29■□□□□ 0.2
ZNF558-205ENST00000597304 FAM43AQ8N2R8 423 aa16.29■□□□□ 0.2
ZNF558-205ENST00000597304 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.29■□□□□ 0.2
ZNF558-205ENST00000597304 PIK3C2GO75747 1445 aa16.28■□□□□ 0.2
ZNF558-205ENST00000597304 MAST1Q9Y2H9 1570 aa16.28■□□□□ 0.2
ZNF558-205ENST00000597304 AMER1Q5JTC6 1135 aaPredicted RBP16.27■□□□□ 0.2
ZNF558-205ENST00000597304 ASXL1Q8IXJ9 1541 aa16.27■□□□□ 0.19
ZNF558-205ENST00000597304 IQGAP1P46940 1657 aa16.27■□□□□ 0.19
ZNF558-205ENST00000597304 EIF5BO60841 1220 aaKnown RBP16.27■□□□□ 0.19
ZNF558-205ENST00000597304 TRMT2AQ8IZ69 625 aaKnown RBP16.27■□□□□ 0.19
ZNF558-205ENST00000597304 ABCC2Q92887 1545 aa16.26■□□□□ 0.19
ZNF558-205ENST00000597304 SYCP2Q9BX26 1530 aa16.26■□□□□ 0.19
ZNF558-205ENST00000597304 ATP10AO60312 1499 aa16.26■□□□□ 0.19
ZNF558-205ENST00000597304 FBLN2P98095 1184 aa16.25■□□□□ 0.19
ZNF558-205ENST00000597304 UBE2Q2Q8WVN8 375 aa16.24■□□□□ 0.19
ZNF558-205ENST00000597304 PLXNC1O60486 1568 aa16.24■□□□□ 0.19
ZNF558-205ENST00000597304 BECN1Q14457 450 aa16.24■□□□□ 0.19
ZNF558-205ENST00000597304 CDCA8Q53HL2 280 aa16.24■□□□□ 0.19
ZNF558-205ENST00000597304 CCDC146Q8IYE0 955 aa16.24■□□□□ 0.19
ZNF558-205ENST00000597304 RSPH6AQ9H0K4 717 aa16.24■□□□□ 0.19
ZNF558-205ENST00000597304 USP19O94966 1318 aa16.24■□□□□ 0.19
ZNF558-205ENST00000597304 BCAR3O75815 825 aa16.23■□□□□ 0.19
ZNF558-205ENST00000597304 MAPK8IP3Q9UPT6 1336 aa16.23■□□□□ 0.19
ZNF558-205ENST00000597304 MADDQ8WXG6 1647 aa16.23■□□□□ 0.19
ZNF558-205ENST00000597304 CGNL1Q0VF96 1302 aa16.22■□□□□ 0.19
ZNF558-205ENST00000597304 E9PSI1 815 aa16.22■□□□□ 0.19
ZNF558-205ENST00000597304 IGHDP01880 384 aa16.22■□□□□ 0.19
ZNF558-205ENST00000597304 SPINK5Q9NQ38 1064 aaPredicted RBP16.22■□□□□ 0.19
ZNF558-205ENST00000597304 MYOM1P52179 1685 aa16.22■□□□□ 0.19
ZNF558-205ENST00000597304 NPC1L1Q9UHC9 1359 aa16.21■□□□□ 0.19
ZNF558-205ENST00000597304 APAF1O14727 1248 aa16.21■□□□□ 0.19
ZNF558-205ENST00000597304 NINLQ9Y2I6 1382 aa16.21■□□□□ 0.18
ZNF558-205ENST00000597304 ARHGAP5Q13017 1502 aa16.2■□□□□ 0.18
ZNF558-205ENST00000597304 POGKQ9P215 609 aa16.2■□□□□ 0.18
ZNF558-205ENST00000597304 PDE3AQ14432 1141 aa16.19■□□□□ 0.18
ZNF558-205ENST00000597304 DUOX2Q9NRD8 1548 aa16.19■□□□□ 0.18
ZNF558-205ENST00000597304 SCAF11Q99590 1463 aaKnown RBP16.18■□□□□ 0.18
ZNF558-205ENST00000597304 CLUAP1Q96AJ1 413 aa16.18■□□□□ 0.18
ZNF558-205ENST00000597304 NLRP1Q9C000 1473 aa16.18■□□□□ 0.18
ZNF558-205ENST00000597304 SEC24BO95487 1268 aa16.17■□□□□ 0.18
ZNF558-205ENST00000597304 SLKQ9H2G2 1235 aaPredicted RBP16.17■□□□□ 0.18
ZNF558-205ENST00000597304 SPHKAPQ2M3C7 1700 aa16.17■□□□□ 0.18
ZNF558-205ENST00000597304 CANXP27824 592 aaKnown RBP16.17■□□□□ 0.18
ZNF558-205ENST00000597304 L1TD1Q5T7N2 865 aaKnown RBP16.17■□□□□ 0.18
ZNF558-205ENST00000597304 KDM5AP29375 1690 aaKnown RBP16.17■□□□□ 0.18
ZNF558-205ENST00000597304 NGEFQ8N5V2 710 aa16.16■□□□□ 0.18
ZNF558-205ENST00000597304 TTC37Q6PGP7 1564 aa16.16■□□□□ 0.18
ZNF558-205ENST00000597304 CENPJQ9HC77 1338 aaPredicted RBP16.16■□□□□ 0.18
ZNF558-205ENST00000597304 ERCC6Q03468 1493 aa16.14■□□□□ 0.17
ZNF558-205ENST00000597304 SCAPERQ9BY12 1400 aa16.14■□□□□ 0.17
ZNF558-205ENST00000597304 UPF2Q9HAU5 1272 aaKnown RBP16.14■□□□□ 0.17
ZNF558-205ENST00000597304 COG6Q9Y2V7 657 aa16.14■□□□□ 0.17
ZNF558-205ENST00000597304 PANK1Q8TE04 598 aa16.13■□□□□ 0.17
ZNF558-205ENST00000597304 DMRT2Q9Y5R5 561 aa16.13■□□□□ 0.17
ZNF558-205ENST00000597304 CEP152O94986 1710 aa16.13■□□□□ 0.17
ZNF558-205ENST00000597304 ANTXR1Q9H6X2 564 aa16.12■□□□□ 0.17
ZNF558-205ENST00000597304 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.12■□□□□ 0.17
ZNF558-205ENST00000597304 ZMYM3Q14202 1370 aa16.11■□□□□ 0.17
ZNF558-205ENST00000597304 PMFBP1Q8TBY8 1022 aa16.11■□□□□ 0.17
ZNF558-205ENST00000597304 TRPM2O94759 1503 aa16.1■□□□□ 0.17
ZNF558-205ENST00000597304 AAMPQ13685 434 aa16.09■□□□□ 0.17
ZNF558-205ENST00000597304 STAC3Q96MF2 364 aa16.09■□□□□ 0.17
ZNF558-205ENST00000597304 TBC1D32Q96NH3 1257 aa16.09■□□□□ 0.17
ZNF558-205ENST00000597304 RRAGDQ9NQL2 400 aaPredicted RBP16.09■□□□□ 0.17
ZNF558-205ENST00000597304 WWC1Q8IX03 1113 aa16.08■□□□□ 0.17
ZNF558-205ENST00000597304 KIAA1210Q9ULL0 1709 aa16.07■□□□□ 0.16
ZNF558-205ENST00000597304 TBC1D2Q9BYX2 928 aa16.07■□□□□ 0.16
ZNF558-205ENST00000597304 CLTCL1P53675 1640 aa16.06■□□□□ 0.16
ZNF558-205ENST00000597304 POLR3AO14802 1390 aaPredicted RBP16.05■□□□□ 0.16
ZNF558-205ENST00000597304 GOLGA6L3A6NEY3 463 aa16.04■□□□□ 0.16
ZNF558-205ENST00000597304 SLC24A1O60721 1099 aa16.04■□□□□ 0.16
ZNF558-205ENST00000597304 PDZRN3Q9UPQ7 1066 aa16.04■□□□□ 0.16
ZNF558-205ENST00000597304 ERVK-7P63135 1459 aa16.04■□□□□ 0.16
ZNF558-205ENST00000597304 RARSP54136 660 aaKnown RBP16.04■□□□□ 0.16
ZNF558-205ENST00000597304 PCDHB15Q9Y5E8 787 aa16.04■□□□□ 0.16
ZNF558-205ENST00000597304 SHPRHQ149N8 1683 aa16.03■□□□□ 0.16
ZNF558-205ENST00000597304 ARXQ96QS3 562 aa16.02■□□□□ 0.16
ZNF558-205ENST00000597304 PTPRTO14522 1441 aa16.02■□□□□ 0.15
ZNF558-205ENST00000597304 RWDD1Q9H446 243 aaPredicted RBP16.02■□□□□ 0.15
ZNF558-205ENST00000597304 SHROOM2Q13796 1616 aa16.02■□□□□ 0.15
ZNF558-205ENST00000597304 XRCC6P12956 609 aaKnown RBP eCLIP16.01■□□□□ 0.15
ZNF558-205ENST00000597304 MCM4P33991 863 aa16.01■□□□□ 0.15
ZNF558-205ENST00000597304 CARD14Q9BXL6 1004 aa16.01■□□□□ 0.15
ZNF558-205ENST00000597304 FSD2A1L4K1 749 aa16.01■□□□□ 0.15
ZNF558-205ENST00000597304 RLBP1P12271 317 aa16■□□□□ 0.15
ZNF558-205ENST00000597304 IQSEC2Q5JU85 1478 aa16■□□□□ 0.15
ZNF558-205ENST00000597304 NEUROD2Q15784 382 aa16■□□□□ 0.15
ZNF558-205ENST00000597304 RUNDC1Q96C34 613 aa15.99■□□□□ 0.15
ZNF558-205ENST00000597304 SPRYD3Q8NCJ5 442 aa15.99■□□□□ 0.15
ZNF558-205ENST00000597304 TNNQ9UQP3 1299 aa15.98■□□□□ 0.15
ZNF558-205ENST00000597304 ABCC1P33527 1531 aa15.98■□□□□ 0.15
ZNF558-205ENST00000597304 CHMP5Q9NZZ3 219 aa15.98■□□□□ 0.15
ZNF558-205ENST00000597304 RRP7AQ9Y3A4 280 aaKnown RBP15.98■□□□□ 0.15
ZNF558-205ENST00000597304 ABCA6Q8N139 1617 aa15.98■□□□□ 0.15
ZNF558-205ENST00000597304 TET3O43151 1660 aa15.98■□□□□ 0.15
ZNF558-205ENST00000597304 MAP3K4Q9Y6R4 1608 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms