RNA–Protein interactions for RNA: ENST00000597047.1

ZNF548-206, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-206ENST00000597047 ZNF142P52746 1687 aaPredicted RBP13.46□□□□□ -0.26
ZNF548-206ENST00000597047 DCAF11Q8TEB1 546 aa13.45□□□□□ -0.26
ZNF548-206ENST00000597047 TMEM131LA2VDJ0 1609 aa13.45□□□□□ -0.26
ZNF548-206ENST00000597047 RIMS2Q9UQ26 1411 aa13.45□□□□□ -0.26
ZNF548-206ENST00000597047 LTKP29376 864 aa13.44□□□□□ -0.26
ZNF548-206ENST00000597047 TMEM2Q9UHN6 1383 aa13.43□□□□□ -0.26
ZNF548-206ENST00000597047 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.42□□□□□ -0.26
ZNF548-206ENST00000597047 TONSLQ96HA7 1378 aa13.41□□□□□ -0.26
ZNF548-206ENST00000597047 L3MBTL2Q969R5 705 aa13.4□□□□□ -0.26
ZNF548-206ENST00000597047 SLC26A8Q96RN1 970 aa13.4□□□□□ -0.26
ZNF548-206ENST00000597047 VGFO15240 615 aaPredicted RBP13.39□□□□□ -0.27
ZNF548-206ENST00000597047 SPATA31E1Q6ZUB1 1445 aa13.39□□□□□ -0.27
ZNF548-206ENST00000597047 RPGRIP1LQ68CZ1 1315 aa13.39□□□□□ -0.27
ZNF548-206ENST00000597047 KDM5AP29375 1690 aaKnown RBP13.38□□□□□ -0.27
ZNF548-206ENST00000597047 ADGRF5Q8IZF2 1346 aa13.38□□□□□ -0.27
ZNF548-206ENST00000597047 SCAF11Q99590 1463 aaKnown RBP13.37□□□□□ -0.27
ZNF548-206ENST00000597047 POLR1AO95602 1720 aaPredicted RBP13.37□□□□□ -0.27
ZNF548-206ENST00000597047 STRCQ7RTU9 1775 aa13.37□□□□□ -0.27
ZNF548-206ENST00000597047 SLIT1O75093 1534 aa13.36□□□□□ -0.27
ZNF548-206ENST00000597047 NEXMIFQ5QGS0 1516 aa13.36□□□□□ -0.27
ZNF548-206ENST00000597047 ILDR2Q71H61 639 aa13.36□□□□□ -0.27
ZNF548-206ENST00000597047 DMRT2Q9Y5R5 561 aa13.36□□□□□ -0.27
ZNF548-206ENST00000597047 NPHP4O75161 1426 aaPredicted RBP13.36□□□□□ -0.27
ZNF548-206ENST00000597047 ARHGAP23Q9P227 1491 aa13.36□□□□□ -0.27
ZNF548-206ENST00000597047 PPLO60437 1756 aa13.35□□□□□ -0.27
ZNF548-206ENST00000597047 ZFYVE9O95405 1425 aa13.35□□□□□ -0.27
ZNF548-206ENST00000597047 CLSPNQ9HAW4 1339 aa13.35□□□□□ -0.27
ZNF548-206ENST00000597047 IQGAP1P46940 1657 aa13.32□□□□□ -0.28
ZNF548-206ENST00000597047 SOCS7O14512 581 aa13.32□□□□□ -0.28
ZNF548-206ENST00000597047 CFAP70Q5T0N1 1121 aa13.32□□□□□ -0.28
ZNF548-206ENST00000597047 STK26Q9P289 416 aa13.32□□□□□ -0.28
ZNF548-206ENST00000597047 NEURL4Q96JN8 1562 aa13.32□□□□□ -0.28
ZNF548-206ENST00000597047 PLEKHG1Q9ULL1 1385 aa13.32□□□□□ -0.28
ZNF548-206ENST00000597047 IFT172Q9UG01 1749 aa13.31□□□□□ -0.28
ZNF548-206ENST00000597047 TMEM132EQ6IEE7 984 aa13.31□□□□□ -0.28
ZNF548-206ENST00000597047 NBPF8Q3BBV2 869 aa13.27□□□□□ -0.29
ZNF548-206ENST00000597047 RBM33Q96EV2 1170 aaKnown RBP13.27□□□□□ -0.29
ZNF548-206ENST00000597047 TBX22Q9Y458 520 aa13.27□□□□□ -0.29
ZNF548-206ENST00000597047 ZNF335Q9H4Z2 1342 aaPredicted RBP13.27□□□□□ -0.29
ZNF548-206ENST00000597047 MED14O60244 1454 aa13.27□□□□□ -0.29
ZNF548-206ENST00000597047 MYOM2P54296 1465 aa13.26□□□□□ -0.29
ZNF548-206ENST00000597047 NBPF1Q3BBV0 1214 aa13.26□□□□□ -0.29
ZNF548-206ENST00000597047 STAC3Q96MF2 364 aa13.26□□□□□ -0.29
ZNF548-206ENST00000597047 DISP3Q9P2K9 1392 aa13.26□□□□□ -0.29
ZNF548-206ENST00000597047 ALKQ9UM73 1620 aa13.26□□□□□ -0.29
ZNF548-206ENST00000597047 ADAMTS13Q76LX8 1427 aa13.25□□□□□ -0.29
ZNF548-206ENST00000597047 METP08581 1390 aa13.25□□□□□ -0.29
ZNF548-206ENST00000597047 C14orf93Q9H972 538 aaKnown RBP13.25□□□□□ -0.29
ZNF548-206ENST00000597047 TRAK1Q9UPV9 953 aa13.25□□□□□ -0.29
ZNF548-206ENST00000597047 AMOTL2Q9Y2J4 779 aa13.25□□□□□ -0.29
ZNF548-206ENST00000597047 PIK3C2GO75747 1445 aa13.24□□□□□ -0.29
ZNF548-206ENST00000597047 C14orf37Q86TY3 774 aa13.24□□□□□ -0.29
ZNF548-206ENST00000597047 PROSER2Q86WR7 435 aaPredicted RBP13.24□□□□□ -0.29
ZNF548-206ENST00000597047 TIMELESSQ9UNS1 1208 aa13.24□□□□□ -0.29
ZNF548-206ENST00000597047 NRXN3Q9Y4C0 1643 aa13.24□□□□□ -0.29
ZNF548-206ENST00000597047 PRAG1Q86YV5 1406 aa13.23□□□□□ -0.29
ZNF548-206ENST00000597047 SAFB2Q14151 953 aaKnown RBP eCLIP13.23□□□□□ -0.29
ZNF548-206ENST00000597047 SETBP1Q9Y6X0 1596 aa13.23□□□□□ -0.29
ZNF548-206ENST00000597047 KCNA6P17658 529 aa13.22□□□□□ -0.29
ZNF548-206ENST00000597047 ROCK2O75116 1388 aaKnown RBP13.21□□□□□ -0.29
ZNF548-206ENST00000597047 CARD11Q9BXL7 1154 aa13.21□□□□□ -0.29
ZNF548-206ENST00000597047 POGKQ9P215 609 aa13.21□□□□□ -0.29
ZNF548-206ENST00000597047 CERKQ8TCT0 537 aa13.2□□□□□ -0.3
ZNF548-206ENST00000597047 NRXN1Q9ULB1 1477 aa13.2□□□□□ -0.3
ZNF548-206ENST00000597047 PTPRUQ92729 1446 aa13.2□□□□□ -0.3
ZNF548-206ENST00000597047 DIP2AQ14689 1571 aa13.2□□□□□ -0.3
ZNF548-206ENST00000597047 WAPLQ7Z5K2 1190 aa13.19□□□□□ -0.3
ZNF548-206ENST00000597047 CHD2O14647 1828 aaKnown RBP13.18□□□□□ -0.3
ZNF548-206ENST00000597047 LAMC1P11047 1609 aa13.18□□□□□ -0.3
ZNF548-206ENST00000597047 STRCP1A6NGW2 1772 aa13.18□□□□□ -0.3
ZNF548-206ENST00000597047 YTHDC2Q9H6S0 1430 aaKnown RBP13.18□□□□□ -0.3
ZNF548-206ENST00000597047 TRPM1Q7Z4N2 1603 aa13.17□□□□□ -0.3
ZNF548-206ENST00000597047 SETD1AO15047 1707 aaKnown RBP13.17□□□□□ -0.3
ZNF548-206ENST00000597047 PRAM1Q96QH2 718 aa13.16□□□□□ -0.3
ZNF548-206ENST00000597047 ASXL1Q8IXJ9 1541 aa13.16□□□□□ -0.3
ZNF548-206ENST00000597047 LRPPRCP42704 1394 aaKnown RBP13.16□□□□□ -0.3
ZNF548-206ENST00000597047 PIK3R4Q99570 1358 aa13.16□□□□□ -0.3
ZNF548-206ENST00000597047 ZEB1P37275 1124 aaPredicted RBP13.15□□□□□ -0.3
ZNF548-206ENST00000597047 KIAA1210Q9ULL0 1709 aa13.15□□□□□ -0.3
ZNF548-206ENST00000597047 MINK1Q8N4C8 1332 aaPredicted RBP13.14□□□□□ -0.31
ZNF548-206ENST00000597047 HIRIP3Q9BW71 556 aaPredicted RBP13.14□□□□□ -0.31
ZNF548-206ENST00000597047 ROBO2Q9HCK4 1378 aa13.14□□□□□ -0.31
ZNF548-206ENST00000597047 TMEM94Q12767 1356 aa13.13□□□□□ -0.31
ZNF548-206ENST00000597047 PLEKHH1Q9ULM0 1364 aa13.13□□□□□ -0.31
ZNF548-206ENST00000597047 NUTM2FA1L443 756 aa13.13□□□□□ -0.31
ZNF548-206ENST00000597047 SCAF1Q9H7N4 1312 aaKnown RBP13.13□□□□□ -0.31
ZNF548-206ENST00000597047 ADGRB1O14514 1584 aa13.12□□□□□ -0.31
ZNF548-206ENST00000597047 RALGAPBQ86X10 1494 aa13.12□□□□□ -0.31
ZNF548-206ENST00000597047 ABCC11Q96J66 1382 aa13.11□□□□□ -0.31
ZNF548-206ENST00000597047 CPS1P31327 1500 aa13.11□□□□□ -0.31
ZNF548-206ENST00000597047 LRRC7Q96NW7 1537 aa13.11□□□□□ -0.31
ZNF548-206ENST00000597047 XRN1Q8IZH2 1706 aaKnown RBP13.1□□□□□ -0.31
ZNF548-206ENST00000597047 LTBP4Q8N2S1 1624 aa13.1□□□□□ -0.31
ZNF548-206ENST00000597047 ATF3P18847 181 aa13.1□□□□□ -0.31
ZNF548-206ENST00000597047 NWD1Q149M9 1564 aa13.1□□□□□ -0.31
ZNF548-206ENST00000597047 CENPJQ9HC77 1338 aaPredicted RBP13.1□□□□□ -0.31
ZNF548-206ENST00000597047 POLR3GLQ9BT43 218 aa13.09□□□□□ -0.31
ZNF548-206ENST00000597047 NKTRP30414 1462 aaKnown RBP13.09□□□□□ -0.31
ZNF548-206ENST00000597047 MSH6P52701 1360 aa13.08□□□□□ -0.31
ZNF548-206ENST00000597047 EIF3AQ14152 1382 aaKnown RBP13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms