RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 MAP3K4Q9Y6R4 1608 aa30.51■■■□□ 2.47
SRRM1-222ENST00000596378 NEURL4Q96JN8 1562 aa30.5■■■□□ 2.47
SRRM1-222ENST00000596378 CFAP65Q6ZU64 1925 aaKnown RBP30.5■■■□□ 2.47
SRRM1-222ENST00000596378 KIAA1210Q9ULL0 1709 aa30.49■■■□□ 2.47
SRRM1-222ENST00000596378 LMTK2Q8IWU2 1503 aa30.48■■■□□ 2.47
SRRM1-222ENST00000596378 GGT6Q6P531 493 aa30.48■■■□□ 2.47
SRRM1-222ENST00000596378 RNF123Q5XPI4 1314 aa30.47■■■□□ 2.47
SRRM1-222ENST00000596378 IFT172Q9UG01 1749 aa30.47■■■□□ 2.47
SRRM1-222ENST00000596378 HECW2Q9P2P5 1572 aa30.47■■■□□ 2.47
SRRM1-222ENST00000596378 MYOM2P54296 1465 aa30.47■■■□□ 2.47
SRRM1-222ENST00000596378 MLH3Q9UHC1 1453 aa30.45■■■□□ 2.47
SRRM1-222ENST00000596378 EIF3AQ14152 1382 aaKnown RBP30.44■■■□□ 2.46
SRRM1-222ENST00000596378 SYNMO15061 1565 aa30.44■■■□□ 2.46
SRRM1-222ENST00000596378 CHGAP10645 457 aaKnown RBP30.44■■■□□ 2.46
SRRM1-222ENST00000596378 MYOM1P52179 1685 aa30.43■■■□□ 2.46
SRRM1-222ENST00000596378 KNSTRNQ9Y448 316 aa30.43■■■□□ 2.46
SRRM1-222ENST00000596378 NPATQ14207 1427 aa30.42■■■□□ 2.46
SRRM1-222ENST00000596378 RAPGEF3O95398 923 aa30.42■■■□□ 2.46
SRRM1-222ENST00000596378 CDCA8Q53HL2 280 aa30.41■■■□□ 2.46
SRRM1-222ENST00000596378 AMER1Q5JTC6 1135 aaPredicted RBP30.39■■■□□ 2.45
SRRM1-222ENST00000596378 ADGRB3O60242 1522 aa30.38■■■□□ 2.45
SRRM1-222ENST00000596378 NOS1P29475 1434 aa30.38■■■□□ 2.45
SRRM1-222ENST00000596378 KDM5AP29375 1690 aaKnown RBP30.37■■■□□ 2.45
SRRM1-222ENST00000596378 BLMP54132 1417 aaPredicted RBP30.36■■■□□ 2.45
SRRM1-222ENST00000596378 NRXN1Q9ULB1 1477 aa30.34■■■□□ 2.45
SRRM1-222ENST00000596378 PPP2R1AP30153 589 aa30.34■■■□□ 2.45
SRRM1-222ENST00000596378 CDCA7LQ96GN5 454 aa30.34■■■□□ 2.45
SRRM1-222ENST00000596378 ERVK-7P63135 1459 aa30.33■■■□□ 2.45
SRRM1-222ENST00000596378 ABCC3O15438 1527 aa30.32■■■□□ 2.44
SRRM1-222ENST00000596378 ASXL1Q8IXJ9 1541 aa30.32■■■□□ 2.44
SRRM1-222ENST00000596378 NEO1Q92859 1461 aa30.3■■■□□ 2.44
SRRM1-222ENST00000596378 ADAMTS8Q9UP79 889 aa30.29■■■□□ 2.44
SRRM1-222ENST00000596378 PPLO60437 1756 aa30.28■■■□□ 2.44
SRRM1-222ENST00000596378 SIGLEC1Q9BZZ2 1709 aa30.27■■■□□ 2.44
SRRM1-222ENST00000596378 PDE3BQ13370 1112 aa30.27■■■□□ 2.44
SRRM1-222ENST00000596378 RCAN3Q9UKA8 241 aa30.27■■■□□ 2.44
SRRM1-222ENST00000596378 CAMSAP1Q5T5Y3 1602 aa30.27■■■□□ 2.44
SRRM1-222ENST00000596378 DIP2CQ9Y2E4 1556 aa30.26■■■□□ 2.44
SRRM1-222ENST00000596378 ZMYM4Q5VZL5 1548 aa30.26■■■□□ 2.43
SRRM1-222ENST00000596378 RRP1P56182 461 aaKnown RBP30.25■■■□□ 2.43
SRRM1-222ENST00000596378 INSRP06213 1382 aa30.25■■■□□ 2.43
SRRM1-222ENST00000596378 CCDC136Q96JN2 1154 aa30.25■■■□□ 2.43
SRRM1-222ENST00000596378 PIK3C2GO75747 1445 aa30.23■■■□□ 2.43
SRRM1-222ENST00000596378 MYO3AQ8NEV4 1616 aa30.23■■■□□ 2.43
SRRM1-222ENST00000596378 TRAK1Q9UPV9 953 aa30.23■■■□□ 2.43
SRRM1-222ENST00000596378 RICTORQ6R327 1708 aa30.21■■■□□ 2.43
SRRM1-222ENST00000596378 NUTM2DQ5VT03 806 aaPredicted RBP30.21■■■□□ 2.43
SRRM1-222ENST00000596378 TMEM132EQ6IEE7 984 aa30.21■■■□□ 2.43
SRRM1-222ENST00000596378 SETBP1Q9Y6X0 1596 aa30.21■■■□□ 2.43
SRRM1-222ENST00000596378 WDR43Q15061 677 aaKnown RBP eCLIP30.19■■■□□ 2.429e-8■■□□□ 12.8
SRRM1-222ENST00000596378 CARD14Q9BXL6 1004 aa30.19■■■□□ 2.42
SRRM1-222ENST00000596378 CENPJQ9HC77 1338 aaPredicted RBP30.19■■■□□ 2.42
SRRM1-222ENST00000596378 C14orf93Q9H972 538 aaKnown RBP30.18■■■□□ 2.42
SRRM1-222ENST00000596378 YEATS2Q9ULM3 1422 aa30.18■■■□□ 2.42
SRRM1-222ENST00000596378 NPC1L1Q9UHC9 1359 aa30.17■■■□□ 2.42
SRRM1-222ENST00000596378 CYB5RLQ6IPT4 315 aa30.17■■■□□ 2.42
SRRM1-222ENST00000596378 ADGRB1O14514 1584 aa30.16■■■□□ 2.42
SRRM1-222ENST00000596378 SLC24A1O60721 1099 aa30.14■■■□□ 2.42
SRRM1-222ENST00000596378 EXOC6Q8TAG9 804 aa30.14■■■□□ 2.42
SRRM1-222ENST00000596378 SBNO2Q9Y2G9 1366 aa30.14■■■□□ 2.42
SRRM1-222ENST00000596378 QRICH2Q9H0J4 1663 aa30.14■■■□□ 2.42
SRRM1-222ENST00000596378 PIK3C2BO00750 1634 aa30.13■■■□□ 2.41
SRRM1-222ENST00000596378 ZC3H13Q5T200 1668 aaKnown RBP30.13■■■□□ 2.41
SRRM1-222ENST00000596378 PLEKHH1Q9ULM0 1364 aa30.12■■■□□ 2.41
SRRM1-222ENST00000596378 RPGRIP1LQ68CZ1 1315 aa30.1■■■□□ 2.41
SRRM1-222ENST00000596378 SENP3Q9H4L4 574 aaPredicted RBP30.09■■■□□ 2.41
SRRM1-222ENST00000596378 PLIN1O60240 522 aa30.08■■■□□ 2.41
SRRM1-222ENST00000596378 MSH5O43196 834 aa30.07■■■□□ 2.4
SRRM1-222ENST00000596378 NEXMIFQ5QGS0 1516 aa30.07■■■□□ 2.4
SRRM1-222ENST00000596378 CCDC146Q8IYE0 955 aa30.07■■■□□ 2.4
SRRM1-222ENST00000596378 ANP32EQ9BTT0 268 aa30.07■■■□□ 2.4
SRRM1-222ENST00000596378 IDI1Q13907 227 aa30.05■■■□□ 2.4
SRRM1-222ENST00000596378 FANCIQ9NVI1 1328 aa30.05■■■□□ 2.4
SRRM1-222ENST00000596378 SLC12A5Q9H2X9 1139 aa30.05■■■□□ 2.4
SRRM1-222ENST00000596378 GLI2P10070 1586 aa30.05■■■□□ 2.4
SRRM1-222ENST00000596378 ARHGAP31Q2M1Z3 1444 aa30.02■■■□□ 2.4
SRRM1-222ENST00000596378 NSD3Q9BZ95 1437 aa30.02■■■□□ 2.4
SRRM1-222ENST00000596378 VGFO15240 615 aaPredicted RBP30■■■□□ 2.39
SRRM1-222ENST00000596378 MYO5BQ9ULV0 1848 aa30■■■□□ 2.39
SRRM1-222ENST00000596378 ZNF521Q96K83 1311 aa30■■■□□ 2.39
SRRM1-222ENST00000596378 ARHGEF28Q8N1W1 1705 aaKnown RBP29.98■■■□□ 2.39
SRRM1-222ENST00000596378 MYT1Q01538 1121 aa29.98■■■□□ 2.39
SRRM1-222ENST00000596378 FAM69CQ0P6D2 419 aa29.97■■■□□ 2.39
SRRM1-222ENST00000596378 DUSP27Q5VZP5 1158 aa29.97■■■□□ 2.39
SRRM1-222ENST00000596378 TNNT2P45379 298 aaPredicted RBP29.96■■■□□ 2.39
SRRM1-222ENST00000596378 PREX1Q8TCU6 1659 aa29.95■■■□□ 2.39
SRRM1-222ENST00000596378 RIMBP3CA6NJZ7 1639 aa29.95■■■□□ 2.39
SRRM1-222ENST00000596378 RIMBP3BA6NNM3 1639 aa29.95■■■□□ 2.39
SRRM1-222ENST00000596378 RIMBP3Q9UFD9 1639 aa29.95■■■□□ 2.39
SRRM1-222ENST00000596378 TSPOAP1O95153 1857 aa29.95■■■□□ 2.38
SRRM1-222ENST00000596378 APAF1O14727 1248 aa29.95■■■□□ 2.38
SRRM1-222ENST00000596378 GOLGA2Q08379 1002 aa29.94■■■□□ 2.38
SRRM1-222ENST00000596378 SAFB2Q14151 953 aaKnown RBP eCLIP29.94■■■□□ 2.38
SRRM1-222ENST00000596378 TULP4Q9NRJ4 1543 aa29.93■■■□□ 2.38
SRRM1-222ENST00000596378 FBXO31Q5XUX0 539 aaPredicted RBP29.91■■■□□ 2.38
SRRM1-222ENST00000596378 CRBNQ96SW2 442 aa29.91■■■□□ 2.38
SRRM1-222ENST00000596378 SLC52A1Q9NWF4 448 aa29.91■■■□□ 2.38
SRRM1-222ENST00000596378 MORC1Q86VD1 984 aa29.91■■■□□ 2.38
SRRM1-222ENST00000596378 C20orf194Q5TEA3 1177 aa29.9■■■□□ 2.38
SRRM1-222ENST00000596378 STK26Q9P289 416 aa29.9■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms