RNA–Protein interactions for RNA: ENST00000594107.1

XRCC1-203, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2

Gene XRCC1, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-203ENST00000594107 CHD2O14647 1828 aaKnown RBP13.4□□□□□ -0.26
XRCC1-203ENST00000594107 NWD1Q149M9 1564 aa13.4□□□□□ -0.26
XRCC1-203ENST00000594107 CHIC2Q9UKJ5 165 aa13.39□□□□□ -0.27
XRCC1-203ENST00000594107 COL16A1Q07092 1604 aaPredicted RBP13.39□□□□□ -0.27
XRCC1-203ENST00000594107 ABCC5O15440 1437 aa13.39□□□□□ -0.27
XRCC1-203ENST00000594107 PPP1R15AO75807 674 aaPredicted RBP13.38□□□□□ -0.27
XRCC1-203ENST00000594107 LRP6O75581 1613 aa13.38□□□□□ -0.27
XRCC1-203ENST00000594107 NUTM2BA6NNL0 878 aaPredicted RBP13.37□□□□□ -0.27
XRCC1-203ENST00000594107 NUTM2EB1AL46 878 aaPredicted RBP13.37□□□□□ -0.27
XRCC1-203ENST00000594107 NUTM2AQ8IVF1 878 aaPredicted RBP13.37□□□□□ -0.27
XRCC1-203ENST00000594107 FGD6Q6ZV73 1430 aa13.37□□□□□ -0.27
XRCC1-203ENST00000594107 CROCC2H7BZ55 1655 aa13.37□□□□□ -0.27
XRCC1-203ENST00000594107 ADGRB3O60242 1522 aa13.36□□□□□ -0.27
XRCC1-203ENST00000594107 LMTK2Q8IWU2 1503 aa13.36□□□□□ -0.27
XRCC1-203ENST00000594107 ATF3P18847 181 aa13.36□□□□□ -0.27
XRCC1-203ENST00000594107 C19orf44Q9H6X5 657 aa13.36□□□□□ -0.27
XRCC1-203ENST00000594107 TBX22Q9Y458 520 aa13.36□□□□□ -0.27
XRCC1-203ENST00000594107 NOS1P29475 1434 aa13.36□□□□□ -0.27
XRCC1-203ENST00000594107 VPS8Q8N3P4 1428 aa13.36□□□□□ -0.27
XRCC1-203ENST00000594107 MYO5BQ9ULV0 1848 aa13.35□□□□□ -0.27
XRCC1-203ENST00000594107 CADPS2Q86UW7 1296 aa13.35□□□□□ -0.27
XRCC1-203ENST00000594107 PLEKHG1Q9ULL1 1385 aa13.34□□□□□ -0.27
XRCC1-203ENST00000594107 DAPK1P53355 1430 aa13.34□□□□□ -0.27
XRCC1-203ENST00000594107 NCOA3Q9Y6Q9 1424 aa13.34□□□□□ -0.27
XRCC1-203ENST00000594107 ANKRD30AQ9BXX3 1397 aa13.33□□□□□ -0.27
XRCC1-203ENST00000594107 PTPN23Q9H3S7 1636 aa13.33□□□□□ -0.28
XRCC1-203ENST00000594107 CHGAP10645 457 aaKnown RBP13.33□□□□□ -0.28
XRCC1-203ENST00000594107 SHPRHQ149N8 1683 aa13.33□□□□□ -0.28
XRCC1-203ENST00000594107 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.33□□□□□ -0.28
XRCC1-203ENST00000594107 RIMS2Q9UQ26 1411 aa13.32□□□□□ -0.28
XRCC1-203ENST00000594107 NUTM2DQ5VT03 806 aaPredicted RBP13.32□□□□□ -0.28
XRCC1-203ENST00000594107 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.32□□□□□ -0.28
XRCC1-203ENST00000594107 ZFYVE9O95405 1425 aa13.31□□□□□ -0.28
XRCC1-203ENST00000594107 AFF2P51816 1311 aa13.31□□□□□ -0.28
XRCC1-203ENST00000594107 AHDC1Q5TGY3 1603 aaPredicted RBP13.31□□□□□ -0.28
XRCC1-203ENST00000594107 GCC2Q8IWJ2 1684 aa13.31□□□□□ -0.28
XRCC1-203ENST00000594107 LOC105371045A0A1W2PR82 267 aa13.3□□□□□ -0.28
XRCC1-203ENST00000594107 APLP2Q06481 763 aa13.3□□□□□ -0.28
XRCC1-203ENST00000594107 BRINP3Q76B58 766 aa13.3□□□□□ -0.28
XRCC1-203ENST00000594107 QTRT2Q9H974 415 aaKnown RBP13.29□□□□□ -0.28
XRCC1-203ENST00000594107 AMOTL2Q9Y2J4 779 aa13.29□□□□□ -0.28
XRCC1-203ENST00000594107 CDK12Q9NYV4 1490 aaPredicted RBP13.29□□□□□ -0.28
XRCC1-203ENST00000594107 TMEM131LA2VDJ0 1609 aa13.28□□□□□ -0.28
XRCC1-203ENST00000594107 LRRC59Q96AG4 307 aaKnown RBP13.27□□□□□ -0.29
XRCC1-203ENST00000594107 RPRD2Q5VT52 1461 aaKnown RBP13.27□□□□□ -0.29
XRCC1-203ENST00000594107 RBM6P78332 1123 aaKnown RBP13.26□□□□□ -0.29
XRCC1-203ENST00000594107 ADAMTS13Q76LX8 1427 aa13.26□□□□□ -0.29
XRCC1-203ENST00000594107 C8orf37Q96NL8 207 aa13.26□□□□□ -0.29
XRCC1-203ENST00000594107 PIK3R4Q99570 1358 aa13.26□□□□□ -0.29
XRCC1-203ENST00000594107 DIP2AQ14689 1571 aa13.25□□□□□ -0.29
XRCC1-203ENST00000594107 NGLY1Q96IV0 654 aa13.23□□□□□ -0.29
XRCC1-203ENST00000594107 SETD5Q9C0A6 1442 aa13.22□□□□□ -0.29
XRCC1-203ENST00000594107 ANKRD50Q9ULJ7 1429 aa13.22□□□□□ -0.29
XRCC1-203ENST00000594107 FAM50AQ14320 339 aaKnown RBP13.22□□□□□ -0.29
XRCC1-203ENST00000594107 RGS12O14924 1447 aa13.22□□□□□ -0.29
XRCC1-203ENST00000594107 PTPRUQ92729 1446 aa13.22□□□□□ -0.29
XRCC1-203ENST00000594107 DDX17Q92841 729 aaKnown RBP13.21□□□□□ -0.29
XRCC1-203ENST00000594107 TRPM2O94759 1503 aa13.21□□□□□ -0.29
XRCC1-203ENST00000594107 ASXL1Q8IXJ9 1541 aa13.2□□□□□ -0.3
XRCC1-203ENST00000594107 ADAMTS2O95450 1211 aa13.2□□□□□ -0.3
XRCC1-203ENST00000594107 ZRANB1Q9UGI0 708 aa13.2□□□□□ -0.3
XRCC1-203ENST00000594107 ADGRL2O95490 1459 aa13.2□□□□□ -0.3
XRCC1-203ENST00000594107 FOXD1Q16676 465 aa13.19□□□□□ -0.3
XRCC1-203ENST00000594107 NHSL1Q5SYE7 1610 aa13.19□□□□□ -0.3
XRCC1-203ENST00000594107 DCCP43146 1447 aa13.19□□□□□ -0.3
XRCC1-203ENST00000594107 E9PCH4 1651 aa13.18□□□□□ -0.3
XRCC1-203ENST00000594107 MST1RQ04912 1400 aa13.18□□□□□ -0.3
XRCC1-203ENST00000594107 PNPLA6Q8IY17 1366 aa13.18□□□□□ -0.3
XRCC1-203ENST00000594107 ATAD2Q6PL18 1390 aa13.17□□□□□ -0.3
XRCC1-203ENST00000594107 UNC13BO14795 1591 aa13.16□□□□□ -0.3
XRCC1-203ENST00000594107 USP21Q9UK80 565 aa13.16□□□□□ -0.3
XRCC1-203ENST00000594107 ZNF326Q5BKZ1 582 aaKnown RBP13.15□□□□□ -0.3
XRCC1-203ENST00000594107 TRPC5Q9UL62 973 aaPredicted RBP13.14□□□□□ -0.31
XRCC1-203ENST00000594107 XRN1Q8IZH2 1706 aaKnown RBP13.13□□□□□ -0.31
XRCC1-203ENST00000594107 METP08581 1390 aa13.12□□□□□ -0.31
XRCC1-203ENST00000594107 CCDC125Q86Z20 511 aa13.12□□□□□ -0.31
XRCC1-203ENST00000594107 NRXN3Q9Y4C0 1643 aa13.12□□□□□ -0.31
XRCC1-203ENST00000594107 NUP155O75694 1391 aa13.11□□□□□ -0.31
XRCC1-203ENST00000594107 FNBP4Q8N3X1 1017 aaPredicted RBP13.11□□□□□ -0.31
XRCC1-203ENST00000594107 ORAI2Q96SN7 254 aa13.11□□□□□ -0.31
XRCC1-203ENST00000594107 ADGRL3Q9HAR2 1447 aa13.11□□□□□ -0.31
XRCC1-203ENST00000594107 SETBP1Q9Y6X0 1596 aa13.1□□□□□ -0.31
XRCC1-203ENST00000594107 IQGAP3Q86VI3 1631 aa13.1□□□□□ -0.31
XRCC1-203ENST00000594107 NALCNQ8IZF0 1738 aa13.09□□□□□ -0.31
XRCC1-203ENST00000594107 C1orf167Q5SNV9 1468 aa13.09□□□□□ -0.31
XRCC1-203ENST00000594107 SOS2Q07890 1332 aaPredicted RBP13.09□□□□□ -0.31
XRCC1-203ENST00000594107 PTCH1Q13635 1447 aa13.07□□□□□ -0.32
XRCC1-203ENST00000594107 ATRNO75882 1429 aa13.05□□□□□ -0.32
XRCC1-203ENST00000594107 LAMC1P11047 1609 aa13.05□□□□□ -0.32
XRCC1-203ENST00000594107 ITGAEP38570 1179 aa13.04□□□□□ -0.32
XRCC1-203ENST00000594107 GJD4Q96KN9 370 aaPredicted RBP13.04□□□□□ -0.32
XRCC1-203ENST00000594107 SPHKAPQ2M3C7 1700 aa13.04□□□□□ -0.32
XRCC1-203ENST00000594107 ESCO1Q5FWF5 840 aa13.03□□□□□ -0.32
XRCC1-203ENST00000594107 ROCK1Q13464 1354 aa13.03□□□□□ -0.32
XRCC1-203ENST00000594107 BCL9LQ86UU0 1499 aa13.03□□□□□ -0.32
XRCC1-203ENST00000594107 VGFO15240 615 aaPredicted RBP13.01□□□□□ -0.33
XRCC1-203ENST00000594107 ROBO2Q9HCK4 1378 aa13.01□□□□□ -0.33
XRCC1-203ENST00000594107 COL22A1Q8NFW1 1626 aaPredicted RBP13.01□□□□□ -0.33
XRCC1-203ENST00000594107 MARF1Q9Y4F3 1742 aaKnown RBP13.01□□□□□ -0.33
XRCC1-203ENST00000594107 NEXMIFQ5QGS0 1516 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms