RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.68■■■□□ 2.02
SHKBP1-202ENST00000593764 PLEKHG1Q9ULL1 1385 aa27.68■■■□□ 2.02
SHKBP1-202ENST00000593764 UBAP1LF5GYI3 381 aa27.67■■■□□ 2.02
SHKBP1-202ENST00000593764 LRRC7Q96NW7 1537 aa27.67■■■□□ 2.02
SHKBP1-202ENST00000593764 NUTM2DQ5VT03 806 aaPredicted RBP27.66■■■□□ 2.02
SHKBP1-202ENST00000593764 TRPM2O94759 1503 aa27.66■■■□□ 2.02
SHKBP1-202ENST00000593764 PPP1R15AO75807 674 aaPredicted RBP27.65■■■□□ 2.02
SHKBP1-202ENST00000593764 SENP3Q9H4L4 574 aaPredicted RBP27.65■■■□□ 2.02
SHKBP1-202ENST00000593764 SETD5Q9C0A6 1442 aa27.64■■■□□ 2.02
SHKBP1-202ENST00000593764 CLTCL1P53675 1640 aa27.63■■■□□ 2.01
SHKBP1-202ENST00000593764 BCANQ96GW7 911 aa27.63■■■□□ 2.01
SHKBP1-202ENST00000593764 KCNA6P17658 529 aa27.62■■■□□ 2.01
SHKBP1-202ENST00000593764 FOXD1Q16676 465 aa27.61■■■□□ 2.01
SHKBP1-202ENST00000593764 MPHOSPH9Q99550 1183 aa27.61■■■□□ 2.01
SHKBP1-202ENST00000593764 TBX22Q9Y458 520 aa27.58■■■□□ 2.01
SHKBP1-202ENST00000593764 ZNF326Q5BKZ1 582 aaKnown RBP27.57■■■□□ 2
SHKBP1-202ENST00000593764 ADAMTS13Q76LX8 1427 aa27.57■■■□□ 2
SHKBP1-202ENST00000593764 TOM1O60784 492 aa27.56■■■□□ 2
SHKBP1-202ENST00000593764 ACIN1Q9UKV3 1341 aaKnown RBP27.55■■■□□ 2
SHKBP1-202ENST00000593764 RAB3GAP2Q9H2M9 1393 aa27.55■■■□□ 2
SHKBP1-202ENST00000593764 ALKQ9UM73 1620 aa27.53■■■□□ 2
SHKBP1-202ENST00000593764 KIF1BO60333 1816 aa27.51■■□□□ 1.99
SHKBP1-202ENST00000593764 NWD1Q149M9 1564 aa27.51■■□□□ 1.99
SHKBP1-202ENST00000593764 XIRP1Q702N8 1843 aaKnown RBP27.51■■□□□ 1.99
SHKBP1-202ENST00000593764 TMEM94Q12767 1356 aa27.49■■□□□ 1.99
SHKBP1-202ENST00000593764 PIP4K2BP78356 416 aa27.49■■□□□ 1.99
SHKBP1-202ENST00000593764 PROSER2Q86WR7 435 aaPredicted RBP27.49■■□□□ 1.99
SHKBP1-202ENST00000593764 NEXMIFQ5QGS0 1516 aa27.49■■□□□ 1.99
SHKBP1-202ENST00000593764 CHD2O14647 1828 aaKnown RBP27.48■■□□□ 1.99
SHKBP1-202ENST00000593764 NKTRP30414 1462 aaKnown RBP27.47■■□□□ 1.99
SHKBP1-202ENST00000593764 RBM33Q96EV2 1170 aaKnown RBP27.47■■□□□ 1.99
SHKBP1-202ENST00000593764 DIP2AQ14689 1571 aa27.47■■□□□ 1.99
SHKBP1-202ENST00000593764 PIK3R4Q99570 1358 aa27.45■■□□□ 1.98
SHKBP1-202ENST00000593764 NRXN3Q9Y4C0 1643 aa27.45■■□□□ 1.98
SHKBP1-202ENST00000593764 SCAF1Q9H7N4 1312 aaKnown RBP27.44■■□□□ 1.98
SHKBP1-202ENST00000593764 SETBP1Q9Y6X0 1596 aa27.44■■□□□ 1.98
SHKBP1-202ENST00000593764 RPGRIP1LQ68CZ1 1315 aa27.42■■□□□ 1.98
SHKBP1-202ENST00000593764 CCDC144AA2RUR9 1427 aa27.42■■□□□ 1.98
SHKBP1-202ENST00000593764 HRCP23327 699 aa27.42■■□□□ 1.98
SHKBP1-202ENST00000593764 PTPRUQ92729 1446 aa27.41■■□□□ 1.98
SHKBP1-202ENST00000593764 VGFO15240 615 aaPredicted RBP27.4■■□□□ 1.98
SHKBP1-202ENST00000593764 AMOTL2Q9Y2J4 779 aa27.38■■□□□ 1.97
SHKBP1-202ENST00000593764 SPATA31E1Q6ZUB1 1445 aa27.38■■□□□ 1.97
SHKBP1-202ENST00000593764 METP08581 1390 aa27.37■■□□□ 1.97
SHKBP1-202ENST00000593764 HSPA1LP34931 641 aa27.37■■□□□ 1.97
SHKBP1-202ENST00000593764 RGL3Q3MIN7 710 aa27.35■■□□□ 1.97
SHKBP1-202ENST00000593764 NCOA3Q9Y6Q9 1424 aa27.33■■□□□ 1.96
SHKBP1-202ENST00000593764 PPLO60437 1756 aa27.32■■□□□ 1.96
SHKBP1-202ENST00000593764 MSH6P52701 1360 aa27.31■■□□□ 1.96
SHKBP1-202ENST00000593764 ANKRD30BQ9BXX2 1392 aa27.29■■□□□ 1.96
SHKBP1-202ENST00000593764 XRN1Q8IZH2 1706 aaKnown RBP27.28■■□□□ 1.96
SHKBP1-202ENST00000593764 ADGRF5Q8IZF2 1346 aa27.28■■□□□ 1.96
SHKBP1-202ENST00000593764 FAM135BQ49AJ0 1406 aa27.27■■□□□ 1.96
SHKBP1-202ENST00000593764 SETD1AO15047 1707 aaKnown RBP27.25■■□□□ 1.95
SHKBP1-202ENST00000593764 C19orf44Q9H6X5 657 aa27.25■■□□□ 1.95
SHKBP1-202ENST00000593764 SLAIN2Q9P270 581 aa27.24■■□□□ 1.95
SHKBP1-202ENST00000593764 C14orf37Q86TY3 774 aa27.23■■□□□ 1.95
SHKBP1-202ENST00000593764 IFT172Q9UG01 1749 aa27.21■■□□□ 1.95
SHKBP1-202ENST00000593764 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.19■■□□□ 1.94
SHKBP1-202ENST00000593764 CADPS2Q86UW7 1296 aa27.17■■□□□ 1.94
SHKBP1-202ENST00000593764 ATF3P18847 181 aa27.16■■□□□ 1.94
SHKBP1-202ENST00000593764 ROBO1Q9Y6N7 1651 aa27.16■■□□□ 1.94
SHKBP1-202ENST00000593764 PIK3C2GO75747 1445 aa27.16■■□□□ 1.94
SHKBP1-202ENST00000593764 ROBO2Q9HCK4 1378 aa27.15■■□□□ 1.94
SHKBP1-202ENST00000593764 PRAG1Q86YV5 1406 aa27.15■■□□□ 1.94
SHKBP1-202ENST00000593764 PTCH1Q13635 1447 aa27.14■■□□□ 1.93
SHKBP1-202ENST00000593764 DISP3Q9P2K9 1392 aa27.13■■□□□ 1.93
SHKBP1-202ENST00000593764 DCCP43146 1447 aa27.12■■□□□ 1.93
SHKBP1-202ENST00000593764 NRXN1Q9ULB1 1477 aa27.12■■□□□ 1.93
SHKBP1-202ENST00000593764 ADGRL3Q9HAR2 1447 aa27.1■■□□□ 1.93
SHKBP1-202ENST00000593764 MYOM2P54296 1465 aa27.1■■□□□ 1.93
SHKBP1-202ENST00000593764 TMEM132EQ6IEE7 984 aa27.09■■□□□ 1.93
SHKBP1-202ENST00000593764 C14orf93Q9H972 538 aaKnown RBP27.09■■□□□ 1.93
SHKBP1-202ENST00000593764 ASXL1Q8IXJ9 1541 aa27.07■■□□□ 1.92
SHKBP1-202ENST00000593764 LRPPRCP42704 1394 aaKnown RBP27.06■■□□□ 1.92
SHKBP1-202ENST00000593764 CFAP70Q5T0N1 1121 aa27.05■■□□□ 1.92
SHKBP1-202ENST00000593764 STK26Q9P289 416 aa27.05■■□□□ 1.92
SHKBP1-202ENST00000593764 NALCNQ8IZF0 1738 aa27.04■■□□□ 1.92
SHKBP1-202ENST00000593764 ABCC11Q96J66 1382 aa27.04■■□□□ 1.92
SHKBP1-202ENST00000593764 TECPR2O15040 1411 aa27.04■■□□□ 1.92
SHKBP1-202ENST00000593764 MST1RQ04912 1400 aa27.04■■□□□ 1.92
SHKBP1-202ENST00000593764 BRINP3Q76B58 766 aa27.03■■□□□ 1.92
SHKBP1-202ENST00000593764 DCAF11Q8TEB1 546 aa27.03■■□□□ 1.92
SHKBP1-202ENST00000593764 DHX57Q6P158 1386 aaKnown RBP27.02■■□□□ 1.92
SHKBP1-202ENST00000593764 KDM2AQ9Y2K7 1162 aa27.02■■□□□ 1.92
SHKBP1-202ENST00000593764 MED1Q15648 1581 aaPredicted RBP27.01■■□□□ 1.92
SHKBP1-202ENST00000593764 YTHDC2Q9H6S0 1430 aaKnown RBP27■■□□□ 1.91
SHKBP1-202ENST00000593764 WAPLQ7Z5K2 1190 aa27■■□□□ 1.91
SHKBP1-202ENST00000593764 STAC3Q96MF2 364 aa26.99■■□□□ 1.91
SHKBP1-202ENST00000593764 PHLPP1O60346 1717 aa26.97■■□□□ 1.91
SHKBP1-202ENST00000593764 ILDR2Q71H61 639 aa26.96■■□□□ 1.91
SHKBP1-202ENST00000593764 PLEKHH1Q9ULM0 1364 aa26.96■■□□□ 1.91
SHKBP1-202ENST00000593764 LAMC1P11047 1609 aa26.95■■□□□ 1.91
SHKBP1-202ENST00000593764 SIRT1Q96EB6 747 aa26.95■■□□□ 1.9
SHKBP1-202ENST00000593764 AHDC1Q5TGY3 1603 aaPredicted RBP26.94■■□□□ 1.9
SHKBP1-202ENST00000593764 KNDC1Q76NI1 1749 aa26.94■■□□□ 1.9
SHKBP1-202ENST00000593764 TRIM26Q12899 539 aaPredicted RBP26.94■■□□□ 1.9
SHKBP1-202ENST00000593764 COL16A1Q07092 1604 aaPredicted RBP26.94■■□□□ 1.9
SHKBP1-202ENST00000593764 C1orf167Q5SNV9 1468 aa26.93■■□□□ 1.9
SHKBP1-202ENST00000593764 ADGRB1O14514 1584 aa26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms