RNA–Protein interactions for RNA: ENST00000592839.6

SF3A2-207, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-207ENST00000592839 ITGAEP38570 1179 aa22.59■■□□□ 1.21
SF3A2-207ENST00000592839 STAG3Q9UJ98 1225 aa22.59■■□□□ 1.21
SF3A2-207ENST00000592839 TRPM2O94759 1503 aa22.58■■□□□ 1.21
SF3A2-207ENST00000592839 NKTRP30414 1462 aaKnown RBP22.57■■□□□ 1.2
SF3A2-207ENST00000592839 DIP2AQ14689 1571 aa22.57■■□□□ 1.2
SF3A2-207ENST00000592839 RIMS2Q9UQ26 1411 aa22.57■■□□□ 1.2
SF3A2-207ENST00000592839 SOCS7O14512 581 aa22.56■■□□□ 1.2
SF3A2-207ENST00000592839 TOM1O60784 492 aa22.53■■□□□ 1.2
SF3A2-207ENST00000592839 CHD2O14647 1828 aaKnown RBP22.52■■□□□ 1.2
SF3A2-207ENST00000592839 HDGFP51858 240 aaKnown RBP22.52■■□□□ 1.2
SF3A2-207ENST00000592839 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.51■■□□□ 1.19
SF3A2-207ENST00000592839 CLTCL1P53675 1640 aa22.5■■□□□ 1.19
SF3A2-207ENST00000592839 KCNA6P17658 529 aa22.5■■□□□ 1.19
SF3A2-207ENST00000592839 SCAF1Q9H7N4 1312 aaKnown RBP22.5■■□□□ 1.19
SF3A2-207ENST00000592839 PIK3R4Q99570 1358 aa22.5■■□□□ 1.19
SF3A2-207ENST00000592839 ADAMTS13Q76LX8 1427 aa22.49■■□□□ 1.19
SF3A2-207ENST00000592839 SETBP1Q9Y6X0 1596 aa22.48■■□□□ 1.19
SF3A2-207ENST00000592839 PIP4K2BP78356 416 aa22.48■■□□□ 1.19
SF3A2-207ENST00000592839 NRXN3Q9Y4C0 1643 aa22.46■■□□□ 1.19
SF3A2-207ENST00000592839 TBX22Q9Y458 520 aa22.46■■□□□ 1.19
SF3A2-207ENST00000592839 ACIN1Q9UKV3 1341 aaKnown RBP22.45■■□□□ 1.18
SF3A2-207ENST00000592839 NCOA3Q9Y6Q9 1424 aa22.45■■□□□ 1.18
SF3A2-207ENST00000592839 KIF1BO60333 1816 aa22.44■■□□□ 1.18
SF3A2-207ENST00000592839 NEXMIFQ5QGS0 1516 aa22.44■■□□□ 1.18
SF3A2-207ENST00000592839 HSPA1LP34931 641 aa22.42■■□□□ 1.18
SF3A2-207ENST00000592839 SLC26A8Q96RN1 970 aa22.42■■□□□ 1.18
SF3A2-207ENST00000592839 TMEM94Q12767 1356 aa22.41■■□□□ 1.18
SF3A2-207ENST00000592839 XRN1Q8IZH2 1706 aaKnown RBP22.39■■□□□ 1.17
SF3A2-207ENST00000592839 PPP1R15AO75807 674 aaPredicted RBP22.37■■□□□ 1.17
SF3A2-207ENST00000592839 FAM135BQ49AJ0 1406 aa22.37■■□□□ 1.17
SF3A2-207ENST00000592839 PRAG1Q86YV5 1406 aa22.36■■□□□ 1.17
SF3A2-207ENST00000592839 SETD1AO15047 1707 aaKnown RBP22.34■■□□□ 1.17
SF3A2-207ENST00000592839 CHGAP10645 457 aaKnown RBP22.33■■□□□ 1.17
SF3A2-207ENST00000592839 SLC4A1APQ9BWU0 796 aaKnown RBP22.33■■□□□ 1.17
SF3A2-207ENST00000592839 PPLO60437 1756 aa22.32■■□□□ 1.16
SF3A2-207ENST00000592839 PTPRUQ92729 1446 aa22.31■■□□□ 1.16
SF3A2-207ENST00000592839 RPGRIP1LQ68CZ1 1315 aa22.31■■□□□ 1.16
SF3A2-207ENST00000592839 SETD5Q9C0A6 1442 aa22.3■■□□□ 1.16
SF3A2-207ENST00000592839 TRIM52Q96A61 297 aa22.29■■□□□ 1.16
SF3A2-207ENST00000592839 PROSER2Q86WR7 435 aaPredicted RBP22.28■■□□□ 1.16
SF3A2-207ENST00000592839 DCCP43146 1447 aa22.28■■□□□ 1.16
SF3A2-207ENST00000592839 SPATA31E1Q6ZUB1 1445 aa22.28■■□□□ 1.16
SF3A2-207ENST00000592839 MSH6P52701 1360 aa22.27■■□□□ 1.16
SF3A2-207ENST00000592839 IFT172Q9UG01 1749 aa22.27■■□□□ 1.16
SF3A2-207ENST00000592839 ROBO1Q9Y6N7 1651 aa22.26■■□□□ 1.15
SF3A2-207ENST00000592839 MED1Q15648 1581 aaPredicted RBP22.25■■□□□ 1.15
SF3A2-207ENST00000592839 BCANQ96GW7 911 aa22.25■■□□□ 1.15
SF3A2-207ENST00000592839 MPHOSPH9Q99550 1183 aa22.25■■□□□ 1.15
SF3A2-207ENST00000592839 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.25■■□□□ 1.15
SF3A2-207ENST00000592839 CCDC144AA2RUR9 1427 aa22.24■■□□□ 1.15
SF3A2-207ENST00000592839 NUTM2DQ5VT03 806 aaPredicted RBP22.23■■□□□ 1.15
SF3A2-207ENST00000592839 METP08581 1390 aa22.23■■□□□ 1.15
SF3A2-207ENST00000592839 PTCH1Q13635 1447 aa22.23■■□□□ 1.15
SF3A2-207ENST00000592839 SENP3Q9H4L4 574 aaPredicted RBP22.22■■□□□ 1.15
SF3A2-207ENST00000592839 VGFO15240 615 aaPredicted RBP22.21■■□□□ 1.15
SF3A2-207ENST00000592839 HRCP23327 699 aa22.21■■□□□ 1.15
SF3A2-207ENST00000592839 ZNF326Q5BKZ1 582 aaKnown RBP22.21■■□□□ 1.15
SF3A2-207ENST00000592839 PHF23Q9BUL5 403 aaPredicted RBP22.21■■□□□ 1.15
SF3A2-207ENST00000592839 AMOTL2Q9Y2J4 779 aa22.2■■□□□ 1.14
SF3A2-207ENST00000592839 RAB3GAP2Q9H2M9 1393 aa22.2■■□□□ 1.14
SF3A2-207ENST00000592839 C19orf44Q9H6X5 657 aa22.18■■□□□ 1.14
SF3A2-207ENST00000592839 ANKRD30BQ9BXX2 1392 aa22.17■■□□□ 1.14
SF3A2-207ENST00000592839 AHDC1Q5TGY3 1603 aaPredicted RBP22.16■■□□□ 1.14
SF3A2-207ENST00000592839 ADGRL3Q9HAR2 1447 aa22.15■■□□□ 1.14
SF3A2-207ENST00000592839 CADPS2Q86UW7 1296 aa22.15■■□□□ 1.14
SF3A2-207ENST00000592839 RBM33Q96EV2 1170 aaKnown RBP22.15■■□□□ 1.14
SF3A2-207ENST00000592839 SLAIN2Q9P270 581 aa22.15■■□□□ 1.14
SF3A2-207ENST00000592839 NRXN1Q9ULB1 1477 aa22.15■■□□□ 1.14
SF3A2-207ENST00000592839 NALCNQ8IZF0 1738 aa22.14■■□□□ 1.14
SF3A2-207ENST00000592839 COL16A1Q07092 1604 aaPredicted RBP22.13■■□□□ 1.13
SF3A2-207ENST00000592839 FOXD1Q16676 465 aa22.13■■□□□ 1.13
SF3A2-207ENST00000592839 TECPR2O15040 1411 aa22.13■■□□□ 1.13
SF3A2-207ENST00000592839 PIK3C2GO75747 1445 aa22.13■■□□□ 1.13
SF3A2-207ENST00000592839 MYOM2P54296 1465 aa22.12■■□□□ 1.13
SF3A2-207ENST00000592839 KNDC1Q76NI1 1749 aa22.11■■□□□ 1.13
SF3A2-207ENST00000592839 PHLPP1O60346 1717 aa22.1■■□□□ 1.13
SF3A2-207ENST00000592839 MST1RQ04912 1400 aa22.1■■□□□ 1.13
SF3A2-207ENST00000592839 LAMC1P11047 1609 aa22.09■■□□□ 1.13
SF3A2-207ENST00000592839 ASXL1Q8IXJ9 1541 aa22.08■■□□□ 1.13
SF3A2-207ENST00000592839 NHSL1Q5SYE7 1610 aa22.07■■□□□ 1.12
SF3A2-207ENST00000592839 ROBO2Q9HCK4 1378 aa22.06■■□□□ 1.12
SF3A2-207ENST00000592839 ATF3P18847 181 aa22.05■■□□□ 1.12
SF3A2-207ENST00000592839 ADGRF5Q8IZF2 1346 aa22.05■■□□□ 1.12
SF3A2-207ENST00000592839 SHPRHQ149N8 1683 aa22.04■■□□□ 1.12
SF3A2-207ENST00000592839 CDC42BPGQ6DT37 1551 aa22.04■■□□□ 1.12
SF3A2-207ENST00000592839 JCADQ9P266 1359 aa22.02■■□□□ 1.12
SF3A2-207ENST00000592839 LRPPRCP42704 1394 aaKnown RBP22.01■■□□□ 1.11
SF3A2-207ENST00000592839 ABCC11Q96J66 1382 aa22.01■■□□□ 1.11
SF3A2-207ENST00000592839 C14orf37Q86TY3 774 aa22.01■■□□□ 1.11
SF3A2-207ENST00000592839 BRINP3Q76B58 766 aa22■■□□□ 1.11
SF3A2-207ENST00000592839 C1orf167Q5SNV9 1468 aa21.96■■□□□ 1.11
SF3A2-207ENST00000592839 SIRT1Q96EB6 747 aa21.96■■□□□ 1.11
SF3A2-207ENST00000592839 STAC3Q96MF2 364 aa21.96■■□□□ 1.11
SF3A2-207ENST00000592839 RGS17Q9UGC6 210 aaPredicted RBP21.96■■□□□ 1.11
SF3A2-207ENST00000592839 RGL3Q3MIN7 710 aa21.95■■□□□ 1.1
SF3A2-207ENST00000592839 C14orf93Q9H972 538 aaKnown RBP21.95■■□□□ 1.1
SF3A2-207ENST00000592839 YTHDC2Q9H6S0 1430 aaKnown RBP21.95■■□□□ 1.1
SF3A2-207ENST00000592839 SPATA31A6Q5VVP1 1343 aa21.94■■□□□ 1.1
SF3A2-207ENST00000592839 DLC1Q96QB1 1528 aa21.94■■□□□ 1.1
SF3A2-207ENST00000592839 ADGRB1O14514 1584 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms