RNA–Protein interactions for RNA: ENST00000590941.5

RUNDC3A-206, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-206ENST00000590941 POLR3GLQ9BT43 218 aa35.84■■■■□ 3.33
RUNDC3A-206ENST00000590941 KTN1Q86UP2 1357 aaKnown RBP35.84■■■■□ 3.33
RUNDC3A-206ENST00000590941 SIGLEC1Q9BZZ2 1709 aa35.83■■■■□ 3.33
RUNDC3A-206ENST00000590941 PPLO60437 1756 aa35.82■■■■□ 3.33
RUNDC3A-206ENST00000590941 SLC24A1O60721 1099 aa35.82■■■■□ 3.33
RUNDC3A-206ENST00000590941 ARHGEF40Q8TER5 1519 aa35.82■■■■□ 3.32
RUNDC3A-206ENST00000590941 TMF1P82094 1093 aa35.81■■■■□ 3.32
RUNDC3A-206ENST00000590941 SYNMO15061 1565 aa35.81■■■■□ 3.32
RUNDC3A-206ENST00000590941 TESK2Q96S53 571 aa35.81■■■■□ 3.32
RUNDC3A-206ENST00000590941 SETBP1Q9Y6X0 1596 aa35.79■■■■□ 3.32
RUNDC3A-206ENST00000590941 PREX1Q8TCU6 1659 aa35.76■■■■□ 3.32
RUNDC3A-206ENST00000590941 SLC52A1Q9NWF4 448 aa35.75■■■■□ 3.31
RUNDC3A-206ENST00000590941 CDCA8Q53HL2 280 aa35.74■■■■□ 3.31
RUNDC3A-206ENST00000590941 CFAP65Q6ZU64 1925 aaKnown RBP35.74■■■■□ 3.31
RUNDC3A-206ENST00000590941 ADGRF5Q8IZF2 1346 aa35.7■■■■□ 3.31
RUNDC3A-206ENST00000590941 PIK3C2GO75747 1445 aa35.69■■■■□ 3.3
RUNDC3A-206ENST00000590941 CHGAP10645 457 aaKnown RBP35.69■■■■□ 3.3
RUNDC3A-206ENST00000590941 DISP3Q9P2K9 1392 aa35.69■■■■□ 3.3
RUNDC3A-206ENST00000590941 MYO3AQ8NEV4 1616 aa35.66■■■■□ 3.3
RUNDC3A-206ENST00000590941 MRS2Q9HD23 443 aa35.65■■■■□ 3.3
RUNDC3A-206ENST00000590941 RALBP1Q15311 655 aa35.63■■■■□ 3.29
RUNDC3A-206ENST00000590941 ZFYVE9O95405 1425 aa35.63■■■■□ 3.29
RUNDC3A-206ENST00000590941 NEXMIFQ5QGS0 1516 aa35.63■■■■□ 3.29
RUNDC3A-206ENST00000590941 ERVK-7P63135 1459 aa35.62■■■■□ 3.29
RUNDC3A-206ENST00000590941 VGFO15240 615 aaPredicted RBP35.61■■■■□ 3.29
RUNDC3A-206ENST00000590941 CFAP70Q5T0N1 1121 aa35.61■■■■□ 3.29
RUNDC3A-206ENST00000590941 SBNO2Q9Y2G9 1366 aa35.6■■■■□ 3.29
RUNDC3A-206ENST00000590941 C14orf93Q9H972 538 aaKnown RBP35.58■■■■□ 3.29
RUNDC3A-206ENST00000590941 CLTCQ00610 1675 aaKnown RBP35.58■■■■□ 3.29
RUNDC3A-206ENST00000590941 TMEM131LA2VDJ0 1609 aa35.57■■■■□ 3.28
RUNDC3A-206ENST00000590941 SPATA31D1Q6ZQQ2 1576 aa35.54■■■■□ 3.28
RUNDC3A-206ENST00000590941 KDM5AP29375 1690 aaKnown RBP35.54■■■■□ 3.28
RUNDC3A-206ENST00000590941 IDI1Q13907 227 aa35.54■■■■□ 3.28
RUNDC3A-206ENST00000590941 ADGRB1O14514 1584 aa35.52■■■■□ 3.28
RUNDC3A-206ENST00000590941 MYBBP1AQ9BQG0 1328 aaKnown RBP35.52■■■■□ 3.28
RUNDC3A-206ENST00000590941 BRD4O60885 1362 aaPredicted RBP35.5■■■■□ 3.27
RUNDC3A-206ENST00000590941 HNRNPUQ00839 825 aaKnown RBP eCLIP35.49■■■■□ 3.27
RUNDC3A-206ENST00000590941 PER1O15534 1290 aaPredicted RBP35.48■■■■□ 3.27
RUNDC3A-206ENST00000590941 CCDC184Q52MB2 194 aa35.48■■■■□ 3.27
RUNDC3A-206ENST00000590941 PARD3Q8TEW0 1356 aa35.48■■■■□ 3.27
RUNDC3A-206ENST00000590941 PANK3Q9H999 370 aa35.43■■■■□ 3.26
RUNDC3A-206ENST00000590941 MYO5BQ9ULV0 1848 aa35.42■■■■□ 3.26
RUNDC3A-206ENST00000590941 CENPJQ9HC77 1338 aaPredicted RBP35.41■■■■□ 3.26
RUNDC3A-206ENST00000590941 ESF1Q9H501 851 aaKnown RBP35.4■■■■□ 3.26
RUNDC3A-206ENST00000590941 MYOM1P52179 1685 aa35.4■■■■□ 3.26
RUNDC3A-206ENST00000590941 FAM9BQ8IZU0 186 aa35.4■■■■□ 3.26
RUNDC3A-206ENST00000590941 TMC1Q8TDI8 760 aa35.38■■■■□ 3.25
RUNDC3A-206ENST00000590941 QRICH2Q9H0J4 1663 aa35.37■■■■□ 3.25
RUNDC3A-206ENST00000590941 NLRP13Q86W25 1043 aa35.37■■■■□ 3.25
RUNDC3A-206ENST00000590941 FBXO31Q5XUX0 539 aaPredicted RBP35.35■■■■□ 3.25
RUNDC3A-206ENST00000590941 ZBED9Q6R2W3 1325 aa35.33■■■■□ 3.25
RUNDC3A-206ENST00000590941 NPC1L1Q9UHC9 1359 aa35.33■■■■□ 3.25
RUNDC3A-206ENST00000590941 STAG3Q9UJ98 1225 aa35.31■■■■□ 3.24
RUNDC3A-206ENST00000590941 ARHGEF28Q8N1W1 1705 aaKnown RBP35.31■■■■□ 3.24
RUNDC3A-206ENST00000590941 KNSTRNQ9Y448 316 aa35.3■■■■□ 3.24
RUNDC3A-206ENST00000590941 PUS7Q96PZ0 661 aaKnown RBP35.29■■■■□ 3.24
RUNDC3A-206ENST00000590941 ASXL1Q8IXJ9 1541 aa35.29■■■■□ 3.24
RUNDC3A-206ENST00000590941 MLECQ14165 292 aa35.28■■■■□ 3.24
RUNDC3A-206ENST00000590941 A2ML1A8K2U0 1454 aa35.28■■■■□ 3.24
RUNDC3A-206ENST00000590941 ZMYM3Q14202 1370 aa35.28■■■■□ 3.24
RUNDC3A-206ENST00000590941 PNISRQ8TF01 805 aaKnown RBP35.27■■■■□ 3.24
RUNDC3A-206ENST00000590941 TRAK1Q9UPV9 953 aa35.27■■■■□ 3.24
RUNDC3A-206ENST00000590941 CNGB1Q14028 1251 aaPredicted RBP35.26■■■■□ 3.23
RUNDC3A-206ENST00000590941 LRPPRCP42704 1394 aaKnown RBP35.25■■■■□ 3.23
RUNDC3A-206ENST00000590941 INSRP06213 1382 aa35.24■■■■□ 3.23
RUNDC3A-206ENST00000590941 TMEM132EQ6IEE7 984 aa35.21■■■■□ 3.23
RUNDC3A-206ENST00000590941 ALKQ9UM73 1620 aa35.18■■■■□ 3.22
RUNDC3A-206ENST00000590941 RIMS2Q9UQ26 1411 aa35.18■■■■□ 3.22
RUNDC3A-206ENST00000590941 CC2D1BQ5T0F9 858 aaKnown RBP35.17■■■■□ 3.22
RUNDC3A-206ENST00000590941 NUTM2DQ5VT03 806 aaPredicted RBP35.17■■■■□ 3.22
RUNDC3A-206ENST00000590941 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.17■■■■□ 3.22
RUNDC3A-206ENST00000590941 NEFLP07196 543 aa35.16■■■■□ 3.22
RUNDC3A-206ENST00000590941 AMER1Q5JTC6 1135 aaPredicted RBP35.15■■■■□ 3.22
RUNDC3A-206ENST00000590941 EVC2Q86UK5 1308 aa35.15■■■■□ 3.22
RUNDC3A-206ENST00000590941 TNRQ92752 1358 aa35.15■■■■□ 3.22
RUNDC3A-206ENST00000590941 HDGFP51858 240 aaKnown RBP35.14■■■■□ 3.22
RUNDC3A-206ENST00000590941 YTHDC2Q9H6S0 1430 aaKnown RBP35.12■■■■□ 3.21
RUNDC3A-206ENST00000590941 SUPT16HQ9Y5B9 1047 aaKnown RBP35.11■■■■□ 3.21
RUNDC3A-206ENST00000590941 DLC1Q96QB1 1528 aa35.09■■■■□ 3.21
RUNDC3A-206ENST00000590941 NINLQ9Y2I6 1382 aa35.09■■■■□ 3.21
RUNDC3A-206ENST00000590941 PTPRMP28827 1452 aa35.08■■■■□ 3.21
RUNDC3A-206ENST00000590941 TULP4Q9NRJ4 1543 aa35.07■■■■□ 3.21
RUNDC3A-206ENST00000590941 USP32Q8NFA0 1604 aa35.07■■■■□ 3.2
RUNDC3A-206ENST00000590941 NLRP1Q9C000 1473 aa35.06■■■■□ 3.2
RUNDC3A-206ENST00000590941 SETD1AO15047 1707 aaKnown RBP35.04■■■■□ 3.2
RUNDC3A-206ENST00000590941 UBR1Q8IWV7 1749 aa35.02■■■■□ 3.2
RUNDC3A-206ENST00000590941 TRHP20396 242 aaPredicted RBP35.01■■■■□ 3.19
RUNDC3A-206ENST00000590941 PPP2R1AP30153 589 aa34.99■■■■□ 3.19
RUNDC3A-206ENST00000590941 SMG6Q86US8 1419 aaKnown RBP34.97■■■■□ 3.19
RUNDC3A-206ENST00000590941 ATAD2Q6PL18 1390 aa34.97■■■■□ 3.19
RUNDC3A-206ENST00000590941 FER1L4A9Z1Z3 1794 aa34.97■■■■□ 3.19
RUNDC3A-206ENST00000590941 NRXN3Q9Y4C0 1643 aa34.96■■■■□ 3.19
RUNDC3A-206ENST00000590941 BLMP54132 1417 aaPredicted RBP34.95■■■■□ 3.19
RUNDC3A-206ENST00000590941 POGKQ9P215 609 aa34.95■■■■□ 3.18
RUNDC3A-206ENST00000590941 STK26Q9P289 416 aa34.95■■■■□ 3.18
RUNDC3A-206ENST00000590941 ANKRD36BQ8N2N9 1353 aa34.95■■■■□ 3.18
RUNDC3A-206ENST00000590941 ABCC11Q96J66 1382 aa34.93■■■■□ 3.18
RUNDC3A-206ENST00000590941 TMEM2Q9UHN6 1383 aa34.93■■■■□ 3.18
RUNDC3A-206ENST00000590941 CARD14Q9BXL6 1004 aa34.93■■■■□ 3.18
RUNDC3A-206ENST00000590941 NSD3Q9BZ95 1437 aa34.93■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms