RNA–Protein interactions for RNA: ENST00000590901.5

CXXC1-214, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 2,562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-214ENST00000590901 ABCC3O15438 1527 aa21.02■□□□□ 0.96
CXXC1-214ENST00000590901 NOP58Q9Y2X3 529 aaKnown RBP21.01■□□□□ 0.95
CXXC1-214ENST00000590901 CFAP70Q5T0N1 1121 aa21.01■□□□□ 0.95
CXXC1-214ENST00000590901 KIF13AQ9H1H9 1805 aa21.01■□□□□ 0.95
CXXC1-214ENST00000590901 MADDQ8WXG6 1647 aa21.01■□□□□ 0.95
CXXC1-214ENST00000590901 DISP3Q9P2K9 1392 aa21■□□□□ 0.95
CXXC1-214ENST00000590901 LMTK2Q8IWU2 1503 aa21■□□□□ 0.95
CXXC1-214ENST00000590901 B4GALNT3Q6L9W6 998 aa20.99■□□□□ 0.95
CXXC1-214ENST00000590901 FBXO31Q5XUX0 539 aaPredicted RBP20.97■□□□□ 0.95
CXXC1-214ENST00000590901 MLECQ14165 292 aa20.96■□□□□ 0.95
CXXC1-214ENST00000590901 PRKCSHP14314 528 aaPredicted RBP20.96■□□□□ 0.95
CXXC1-214ENST00000590901 SENP3-EIF4A1A0A087X0R7 540 aa20.94■□□□□ 0.94
CXXC1-214ENST00000590901 CAMSAP1Q5T5Y3 1602 aa20.93■□□□□ 0.94
CXXC1-214ENST00000590901 KIF1BO60333 1816 aa20.93■□□□□ 0.94
CXXC1-214ENST00000590901 ZBED9Q6R2W3 1325 aa20.93■□□□□ 0.94
CXXC1-214ENST00000590901 NOS1P29475 1434 aa20.92■□□□□ 0.94
CXXC1-214ENST00000590901 IDI1Q13907 227 aa20.92■□□□□ 0.94
CXXC1-214ENST00000590901 NBR1Q14596 966 aa20.91■□□□□ 0.94
CXXC1-214ENST00000590901 SYNMO15061 1565 aa20.91■□□□□ 0.94
CXXC1-214ENST00000590901 PAK3O75914 559 aaPredicted RBP20.9■□□□□ 0.94
CXXC1-214ENST00000590901 FAM9BQ8IZU0 186 aa20.9■□□□□ 0.94
CXXC1-214ENST00000590901 TMEM132EQ6IEE7 984 aa20.89■□□□□ 0.93
CXXC1-214ENST00000590901 MRS2Q9HD23 443 aa20.89■□□□□ 0.93
CXXC1-214ENST00000590901 ZMYM4Q5VZL5 1548 aa20.89■□□□□ 0.93
CXXC1-214ENST00000590901 ADGRB3O60242 1522 aa20.87■□□□□ 0.93
CXXC1-214ENST00000590901 IFT172Q9UG01 1749 aa20.86■□□□□ 0.93
CXXC1-214ENST00000590901 ARID4BQ4LE39 1312 aaPredicted RBP20.86■□□□□ 0.93
CXXC1-214ENST00000590901 LAMC1P11047 1609 aa20.86■□□□□ 0.93
CXXC1-214ENST00000590901 IQGAP1P46940 1657 aa20.84■□□□□ 0.93
CXXC1-214ENST00000590901 PER1O15534 1290 aaPredicted RBP20.84■□□□□ 0.93
CXXC1-214ENST00000590901 PANK3Q9H999 370 aa20.82■□□□□ 0.92
CXXC1-214ENST00000590901 ANP32AP39687 249 aaKnown RBP20.81■□□□□ 0.92
CXXC1-214ENST00000590901 MYO5BQ9ULV0 1848 aa20.81■□□□□ 0.92
CXXC1-214ENST00000590901 TRAK1Q9UPV9 953 aa20.81■□□□□ 0.92
CXXC1-214ENST00000590901 SCAF11Q99590 1463 aaKnown RBP20.81■□□□□ 0.92
CXXC1-214ENST00000590901 MYOM2P54296 1465 aa20.8■□□□□ 0.92
CXXC1-214ENST00000590901 TMF1P82094 1093 aa20.8■□□□□ 0.92
CXXC1-214ENST00000590901 IPO9Q96P70 1041 aaKnown RBP20.8■□□□□ 0.92
CXXC1-214ENST00000590901 RTL5Q5HYW3 569 aaPredicted RBP20.79■□□□□ 0.92
CXXC1-214ENST00000590901 PPLO60437 1756 aa20.79■□□□□ 0.92
CXXC1-214ENST00000590901 PIK3C2BO00750 1634 aa20.79■□□□□ 0.92
CXXC1-214ENST00000590901 NRXN1Q9ULB1 1477 aa20.79■□□□□ 0.92
CXXC1-214ENST00000590901 CC2D1BQ5T0F9 858 aaKnown RBP20.79■□□□□ 0.92
CXXC1-214ENST00000590901 NEURL4Q96JN8 1562 aa20.78■□□□□ 0.92
CXXC1-214ENST00000590901 ARHGAP31Q2M1Z3 1444 aa20.78■□□□□ 0.92
CXXC1-214ENST00000590901 SMG6Q86US8 1419 aaKnown RBP20.76■□□□□ 0.91
CXXC1-214ENST00000590901 PIK3C2GO75747 1445 aa20.76■□□□□ 0.91
CXXC1-214ENST00000590901 PREX1Q8TCU6 1659 aa20.76■□□□□ 0.91
CXXC1-214ENST00000590901 C14orf93Q9H972 538 aaKnown RBP20.76■□□□□ 0.91
CXXC1-214ENST00000590901 STAC3Q96MF2 364 aa20.75■□□□□ 0.91
CXXC1-214ENST00000590901 CLTCQ00610 1675 aaKnown RBP20.75■□□□□ 0.91
CXXC1-214ENST00000590901 ZBTB47Q9UFB7 747 aaPredicted RBP20.74■□□□□ 0.91
CXXC1-214ENST00000590901 NEXMIFQ5QGS0 1516 aa20.73■□□□□ 0.91
CXXC1-214ENST00000590901 ZC3H13Q5T200 1668 aaKnown RBP20.72■□□□□ 0.91
CXXC1-214ENST00000590901 KIAA1210Q9ULL0 1709 aa20.72■□□□□ 0.91
CXXC1-214ENST00000590901 CCDC136Q96JN2 1154 aa20.72■□□□□ 0.91
CXXC1-214ENST00000590901 ADGRB1O14514 1584 aa20.7■□□□□ 0.9
CXXC1-214ENST00000590901 TRHP20396 242 aaPredicted RBP20.7■□□□□ 0.9
CXXC1-214ENST00000590901 SAFB2Q14151 953 aaKnown RBP eCLIP20.7■□□□□ 0.9
CXXC1-214ENST00000590901 RNF123Q5XPI4 1314 aa20.7■□□□□ 0.9
CXXC1-214ENST00000590901 SLC52A1Q9NWF4 448 aa20.7■□□□□ 0.9
CXXC1-214ENST00000590901 ERVK-7P63135 1459 aa20.69■□□□□ 0.9
CXXC1-214ENST00000590901 ANO8Q9HCE9 1232 aaPredicted RBP20.69■□□□□ 0.9
CXXC1-214ENST00000590901 TMEM131LA2VDJ0 1609 aa20.69■□□□□ 0.9
CXXC1-214ENST00000590901 STK26Q9P289 416 aa20.69■□□□□ 0.9
CXXC1-214ENST00000590901 AGLP35573 1532 aa20.69■□□□□ 0.9
CXXC1-214ENST00000590901 ARHGEF40Q8TER5 1519 aa20.69■□□□□ 0.9
CXXC1-214ENST00000590901 PNISRQ8TF01 805 aaKnown RBP20.68■□□□□ 0.9
CXXC1-214ENST00000590901 NUDCQ9Y266 331 aa20.68■□□□□ 0.9
CXXC1-214ENST00000590901 REREQ9P2R6 1566 aa20.67■□□□□ 0.9
CXXC1-214ENST00000590901 PLPPR3Q6T4P5 718 aa20.66■□□□□ 0.9
CXXC1-214ENST00000590901 RPGRIP1LQ68CZ1 1315 aa20.66■□□□□ 0.9
CXXC1-214ENST00000590901 VGFO15240 615 aaPredicted RBP20.66■□□□□ 0.9
CXXC1-214ENST00000590901 TMC1Q8TDI8 760 aa20.66■□□□□ 0.9
CXXC1-214ENST00000590901 CEBPAP49715 358 aaPredicted RBP20.65■□□□□ 0.9
CXXC1-214ENST00000590901 PARD3Q8TEW0 1356 aa20.65■□□□□ 0.9
CXXC1-214ENST00000590901 MYOM1P52179 1685 aa20.64■□□□□ 0.89
CXXC1-214ENST00000590901 CENPJQ9HC77 1338 aaPredicted RBP20.64■□□□□ 0.89
CXXC1-214ENST00000590901 ZMYM3Q14202 1370 aa20.63■□□□□ 0.89
CXXC1-214ENST00000590901 CARD14Q9BXL6 1004 aa20.63■□□□□ 0.89
CXXC1-214ENST00000590901 STAG3Q9UJ98 1225 aa20.63■□□□□ 0.89
CXXC1-214ENST00000590901 MYBBP1AQ9BQG0 1328 aaKnown RBP20.63■□□□□ 0.89
CXXC1-214ENST00000590901 ASXL1Q8IXJ9 1541 aa20.62■□□□□ 0.89
CXXC1-214ENST00000590901 EIF3AQ14152 1382 aaKnown RBP20.62■□□□□ 0.89
CXXC1-214ENST00000590901 KTN1Q86UP2 1357 aaKnown RBP20.62■□□□□ 0.89
CXXC1-214ENST00000590901 AMER1Q5JTC6 1135 aaPredicted RBP20.61■□□□□ 0.89
CXXC1-214ENST00000590901 RALBP1Q15311 655 aa20.61■□□□□ 0.89
CXXC1-214ENST00000590901 SLC12A5Q9H2X9 1139 aa20.6■□□□□ 0.89
CXXC1-214ENST00000590901 SALL2Q9Y467 1007 aaPredicted RBP20.59■□□□□ 0.89
CXXC1-214ENST00000590901 SETBP1Q9Y6X0 1596 aa20.59■□□□□ 0.89
CXXC1-214ENST00000590901 IL27Q8NEV9 243 aa20.57■□□□□ 0.88
CXXC1-214ENST00000590901 A2ML1A8K2U0 1454 aa20.57■□□□□ 0.88
CXXC1-214ENST00000590901 KNSTRNQ9Y448 316 aa20.56■□□□□ 0.88
CXXC1-214ENST00000590901 SPATA31D1Q6ZQQ2 1576 aa20.56■□□□□ 0.88
CXXC1-214ENST00000590901 QRICH2Q9H0J4 1663 aa20.56■□□□□ 0.88
CXXC1-214ENST00000590901 ESF1Q9H501 851 aaKnown RBP20.55■□□□□ 0.88
CXXC1-214ENST00000590901 CABP2Q9NPB3 220 aa20.55■□□□□ 0.88
CXXC1-214ENST00000590901 PPP6R1Q9UPN7 881 aa20.55■□□□□ 0.88
CXXC1-214ENST00000590901 KDM5AP29375 1690 aaKnown RBP20.54■□□□□ 0.88
CXXC1-214ENST00000590901 MYO3AQ8NEV4 1616 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms