RNA–Protein interactions for RNA: ENST00000590407.1

PDE4A-207, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best)

Gene PDE4A, Length 1,770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-207ENST00000590407 SLC24A1O60721 1099 aa16.34■□□□□ 0.21
PDE4A-207ENST00000590407 ZFYVE16Q7Z3T8 1539 aa16.34■□□□□ 0.21
PDE4A-207ENST00000590407 SENP3-EIF4A1A0A087X0R7 540 aa16.33■□□□□ 0.21
PDE4A-207ENST00000590407 AMER1Q5JTC6 1135 aaPredicted RBP16.33■□□□□ 0.21
PDE4A-207ENST00000590407 ZNF521Q96K83 1311 aa16.33■□□□□ 0.21
PDE4A-207ENST00000590407 TRAPPC8Q9Y2L5 1435 aa16.33■□□□□ 0.2
PDE4A-207ENST00000590407 ERCC6L2Q5T890 1561 aa16.33■□□□□ 0.2
PDE4A-207ENST00000590407 PPP2R1AP30153 589 aa16.32■□□□□ 0.2
PDE4A-207ENST00000590407 CLTCL1P53675 1640 aa16.32■□□□□ 0.2
PDE4A-207ENST00000590407 KNSTRNQ9Y448 316 aa16.31■□□□□ 0.2
PDE4A-207ENST00000590407 EIF3AQ14152 1382 aaKnown RBP16.31■□□□□ 0.2
PDE4A-207ENST00000590407 MYOM1P52179 1685 aa16.3■□□□□ 0.2
PDE4A-207ENST00000590407 ADAMTS8Q9UP79 889 aa16.3■□□□□ 0.2
PDE4A-207ENST00000590407 SALL2Q9Y467 1007 aaPredicted RBP16.3■□□□□ 0.2
PDE4A-207ENST00000590407 KDM2BQ8NHM5 1336 aa16.29■□□□□ 0.2
PDE4A-207ENST00000590407 CRBNQ96SW2 442 aa16.29■□□□□ 0.2
PDE4A-207ENST00000590407 MYOM2P54296 1465 aa16.29■□□□□ 0.2
PDE4A-207ENST00000590407 SPAG9O60271 1321 aaKnown RBP16.28■□□□□ 0.2
PDE4A-207ENST00000590407 DUSP27Q5VZP5 1158 aa16.28■□□□□ 0.2
PDE4A-207ENST00000590407 NGEFQ8N5V2 710 aa16.28■□□□□ 0.2
PDE4A-207ENST00000590407 USP35Q9P2H5 1018 aa16.28■□□□□ 0.2
PDE4A-207ENST00000590407 INO80Q9ULG1 1556 aaPredicted RBP16.28■□□□□ 0.2
PDE4A-207ENST00000590407 PLEKHH1Q9ULM0 1364 aa16.28■□□□□ 0.2
PDE4A-207ENST00000590407 RTL5Q5HYW3 569 aaPredicted RBP16.28■□□□□ 0.2
PDE4A-207ENST00000590407 KDM5AP29375 1690 aaKnown RBP16.27■□□□□ 0.2
PDE4A-207ENST00000590407 WDR43Q15061 677 aaKnown RBP eCLIP16.27■□□□□ 0.2
PDE4A-207ENST00000590407 NBR1Q14596 966 aa16.26■□□□□ 0.19
PDE4A-207ENST00000590407 CENPQQ7L2Z9 268 aaPredicted RBP16.26■□□□□ 0.19
PDE4A-207ENST00000590407 TRMT2AQ8IZ69 625 aaKnown RBP16.26■□□□□ 0.19
PDE4A-207ENST00000590407 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.26■□□□□ 0.19
PDE4A-207ENST00000590407 DDRGK1Q96HY6 314 aa16.26■□□□□ 0.19
PDE4A-207ENST00000590407 GOLGA2Q08379 1002 aa16.25■□□□□ 0.19
PDE4A-207ENST00000590407 KANK1Q14678 1352 aa16.25■□□□□ 0.19
PDE4A-207ENST00000590407 ABCA9Q8IUA7 1624 aa16.24■□□□□ 0.19
PDE4A-207ENST00000590407 PLIN1O60240 522 aa16.24■□□□□ 0.19
PDE4A-207ENST00000590407 ATP7AQ04656 1500 aa16.23■□□□□ 0.19
PDE4A-207ENST00000590407 SBNO2Q9Y2G9 1366 aa16.23■□□□□ 0.19
PDE4A-207ENST00000590407 MAP3K4Q9Y6R4 1608 aa16.23■□□□□ 0.19
PDE4A-207ENST00000590407 PPM1GO15355 546 aaPredicted RBP16.23■□□□□ 0.19
PDE4A-207ENST00000590407 SLFN5Q08AF3 891 aa16.23■□□□□ 0.19
PDE4A-207ENST00000590407 MYO3AQ8NEV4 1616 aa16.23■□□□□ 0.19
PDE4A-207ENST00000590407 NRXN1Q9ULB1 1477 aa16.21■□□□□ 0.19
PDE4A-207ENST00000590407 IFT172Q9UG01 1749 aa16.2■□□□□ 0.18
PDE4A-207ENST00000590407 MROH1Q8NDA8 1641 aa16.2■□□□□ 0.18
PDE4A-207ENST00000590407 ERVK-7P63135 1459 aa16.19■□□□□ 0.18
PDE4A-207ENST00000590407 ABCA6Q8N139 1617 aa16.19■□□□□ 0.18
PDE4A-207ENST00000590407 LMTK2Q8IWU2 1503 aa16.19■□□□□ 0.18
PDE4A-207ENST00000590407 NKTRP30414 1462 aaKnown RBP16.19■□□□□ 0.18
PDE4A-207ENST00000590407 C20orf194Q5TEA3 1177 aa16.18■□□□□ 0.18
PDE4A-207ENST00000590407 EFCAB6Q5THR3 1501 aa16.17■□□□□ 0.18
PDE4A-207ENST00000590407 NINLQ9Y2I6 1382 aa16.17■□□□□ 0.18
PDE4A-207ENST00000590407 SETBP1Q9Y6X0 1596 aa16.17■□□□□ 0.18
PDE4A-207ENST00000590407 NPM2Q86SE8 214 aaKnown RBP16.17■□□□□ 0.18
PDE4A-207ENST00000590407 KIF1BO60333 1816 aa16.16■□□□□ 0.18
PDE4A-207ENST00000590407 AFAP1Q8N556 730 aa16.16■□□□□ 0.18
PDE4A-207ENST00000590407 FANCAO15360 1455 aa16.16■□□□□ 0.18
PDE4A-207ENST00000590407 E9PSI1 815 aa16.15■□□□□ 0.18
PDE4A-207ENST00000590407 POLR3AO14802 1390 aaPredicted RBP16.15■□□□□ 0.18
PDE4A-207ENST00000590407 FAM161AQ3B820 660 aa16.14■□□□□ 0.17
PDE4A-207ENST00000590407 ADGRB3O60242 1522 aa16.12■□□□□ 0.17
PDE4A-207ENST00000590407 USP32Q8NFA0 1604 aa16.11■□□□□ 0.17
PDE4A-207ENST00000590407 NEFMP07197 916 aa16.1■□□□□ 0.17
PDE4A-207ENST00000590407 PDE3AQ14432 1141 aa16.1■□□□□ 0.17
PDE4A-207ENST00000590407 ADGRL1O94910 1474 aa16.1■□□□□ 0.17
PDE4A-207ENST00000590407 C8orf34Q49A92 452 aa16.1■□□□□ 0.17
PDE4A-207ENST00000590407 NCBP3Q53F19 620 aaKnown RBP16.1■□□□□ 0.17
PDE4A-207ENST00000590407 PPRC1Q5VV67 1664 aaKnown RBP16.09■□□□□ 0.17
PDE4A-207ENST00000590407 CGNL1Q0VF96 1302 aa16.09■□□□□ 0.17
PDE4A-207ENST00000590407 AAMPQ13685 434 aa16.09■□□□□ 0.17
PDE4A-207ENST00000590407 ZC3H13Q5T200 1668 aaKnown RBP16.09■□□□□ 0.17
PDE4A-207ENST00000590407 APAF1O14727 1248 aa16.08■□□□□ 0.17
PDE4A-207ENST00000590407 KIF3BO15066 747 aa16.08■□□□□ 0.17
PDE4A-207ENST00000590407 CFAP70Q5T0N1 1121 aa16.08■□□□□ 0.17
PDE4A-207ENST00000590407 CARD14Q9BXL6 1004 aa16.08■□□□□ 0.17
PDE4A-207ENST00000590407 MROH2AA6NES4 1674 aa16.08■□□□□ 0.16
PDE4A-207ENST00000590407 ADGRF5Q8IZF2 1346 aa16.08■□□□□ 0.16
PDE4A-207ENST00000590407 VIRMAQ69YN4 1812 aaKnown RBP16.07■□□□□ 0.16
PDE4A-207ENST00000590407 KIDINS220Q9ULH0 1771 aa16.07■□□□□ 0.16
PDE4A-207ENST00000590407 UGGT1Q9NYU2 1555 aa16.07■□□□□ 0.16
PDE4A-207ENST00000590407 ZMYM3Q14202 1370 aa16.07■□□□□ 0.16
PDE4A-207ENST00000590407 PUS7Q96PZ0 661 aaKnown RBP16.06■□□□□ 0.16
PDE4A-207ENST00000590407 SHPRHQ149N8 1683 aa16.06■□□□□ 0.16
PDE4A-207ENST00000590407 SPINK5Q9NQ38 1064 aaPredicted RBP16.05■□□□□ 0.16
PDE4A-207ENST00000590407 LAS1LQ9Y4W2 734 aaKnown RBP16.05■□□□□ 0.16
PDE4A-207ENST00000590407 SKAP1Q86WV1 359 aa16.05■□□□□ 0.16
PDE4A-207ENST00000590407 CCDC146Q8IYE0 955 aa16.05■□□□□ 0.16
PDE4A-207ENST00000590407 IQSEC2Q5JU85 1478 aa16.04■□□□□ 0.16
PDE4A-207ENST00000590407 PHF23Q9BUL5 403 aaPredicted RBP16.04■□□□□ 0.16
PDE4A-207ENST00000590407 ZNF518AQ6AHZ1 1483 aa16.04■□□□□ 0.16
PDE4A-207ENST00000590407 ADGRB1O14514 1584 aa16.04■□□□□ 0.16
PDE4A-207ENST00000590407 PPLO60437 1756 aa16.04■□□□□ 0.16
PDE4A-207ENST00000590407 CENPJQ9HC77 1338 aaPredicted RBP16.04■□□□□ 0.16
PDE4A-207ENST00000590407 RPGRIP1LQ68CZ1 1315 aa16.03■□□□□ 0.16
PDE4A-207ENST00000590407 MAPK8IP3Q9UPT6 1336 aa16.02■□□□□ 0.16
PDE4A-207ENST00000590407 WWC1Q8IX03 1113 aa16.02■□□□□ 0.15
PDE4A-207ENST00000590407 C14orf93Q9H972 538 aaKnown RBP16.01■□□□□ 0.15
PDE4A-207ENST00000590407 NOS1P29475 1434 aa16.01■□□□□ 0.15
PDE4A-207ENST00000590407 QRICH2Q9H0J4 1663 aa16.01■□□□□ 0.15
PDE4A-207ENST00000590407 BCAR3O75815 825 aa16■□□□□ 0.15
PDE4A-207ENST00000590407 CCDC27Q2M243 656 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms